IVF0012066 (gene) Melon (IVF77) v1

Overview
NameIVF0012066
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Locationchr09: 16929793 .. 16932186 (+)
RNA-Seq ExpressionIVF0012066
SyntenyIVF0012066
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCACTATTATATTCTAGAATACTCCATGCAATATTAAAAGGGTAGACTGGAGTACTGAATCAGTCCAAGGAAACCACTTGAGAGTATTGATCAAATCTTTTTTGTTTCCCAATGGCAGAAACTAAACCACATGAAATCTCCCTAGACATGAATGAACTCTATTCCTTCATCACTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACCTGGGGGACAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTGTTAGTTCAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAATTTACCCCCTTCTCCTCCACCTCTTTCAGAGCTTATTGGGACTGTTATGTTGACTGCCTTCGTGTTTTCTTTTTGTGGAGTTCTCCTTCAAAAGCCATTCCCAAAAATTGCACATCTGTTGCAAATGTTCGGTGCTCTATTGGCTGCAATTGGTGTCTGCATTATGGGAAGTCCTCTACTCCATCCAAACCTGACTTGGATCCGTTGGCTGGCGTGTGGCCTCATCTTGCCAGCCTTTATTACATCATTCAAGTGAATATGACAGAATATGCATCCCAAGGTCCGGAGATGGACAGAGGGTGCAGTTCTGTAGAATCCATGCCCATGTGTTTTTATCTCTTTGACAGTCTCTGTTTCTTGACCTTGTGTGGTTCACCACCAAGACAACATCAGCTCCAATTTCCCTGAAAATTCATGTTATTCTACAACTTATATAGTGACATGATAACTCTGCCTGTGTCATGCCATAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGTTCTAAAGACGGAGGCTTAAAGTATAAGTAGCCATATTTTCATCGAAGTAGACTAGTACTAAAGATGGCAGCATCAAGAAAGATGGATTCTCTGTTGGAGTAGACTGATGCAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAAATTAAAATCTTGTCGACGAAAGAAAAAGTTTACATATTTTTTAGTCAGTGCAATTAATAGTGGAATGGGCATGATATGTTGAATATTATTAGAAAATATCTATAAACTATGCTGTTGTTCGTACAACATGGGTGACGCACACACATGAGAACTACAACAAAGACAATAATAAATCAAGGTTCACAAGAATATCCATCCATAACAAGAAATAAACTCTCTAGAGGCTGCAGACACAAGTGTTCACTAAAATCGTGCGGACTCCAATTGAGAGTAACTGATTACAAATAAAGAAAATTTAATTATGTCCTCTCCAGTTCTGCCTCGGTCTCATGCAAGTAACTGAGGCAACAAAGAGAAGAAAAGGGGAGGTTTCAATGTCGCACAATGCTCGTATGGCCTGAGATACAAGTTCCCTGCAGACCATGAATTTAAGTGCTACCTATATTGCTTACTTTCCCTAAATTATTTGAAAATATCTAAATGGAGAGTTAACATACATAATTAAGCTATAAAAAAAAGGTAAGAAAAGAAAGAGGTAATTTGAAAGACAGCAGAGCAATCAGAGAACTTTGAAGACCAGGATGAATGTAATTTCCACATCAATTTCAGATAACAAAGTTTTCATCATTTTTCCTTGCTTCTCTTACAACAAGTTGACCAATTCAATACAAAAACATATCTGCATCAATTCACTTATCCTTGAAGGATATCAAAACCACATTTTCCTTTAAAAATAATGTAAAGTCAACAAACATAAGGCAACAACAATCAGAGAACTTTGAAGGCATTGCACAACATGAGTTAGGCACATCATGTATTCACCTCAAAAAAACCTCATCATTTTGTTTGGCTACTTCTTACATCCTTTAAGTAAAGACAACCCCATGAAAAGGAAACAGGACATTTCGAAAGTTCACATTTATAAGACGACTTTATAGTTGTTTCTTTGGCCAAGCAGGGTTGAGCTGGAGAAAAACTTCGCCCATAACCATAGATGTAAAAGCCAAAATGAATGTAGCACCATAAGTATATACCCTTTTCTCGATTTTCCTTGTCACTAAACTCGAAGAAGCAAGGGGCTATTTGGTGCATCAAATCATAAAGTAAAAGGAAATACAAATATTTATGCTAATGGCTAAGTAATGCGCCGCTTACCAGAGAATGGATTGGAAGAAGCTGATCTCCAGATTAGCCCCAATGGGCAAAGGTTTTCAGGTTGCGGCAATTGTGAACCAACGTATCGGCTTTTATAGAAGTTTGACGGATTAGGGTTTTAGGAATCCTCGATTTGTTGTTCCTACGAGATTGTTGACTCCGTTAATTCGAAAATACATAAAAAGATGCTT

mRNA sequence

TTCACTATTATATTCTAGAATACTCCATGCAATATTAAAAGGGTAGACTGGAGTACTGAATCAGTCCAAGGAAACCACTTGAGAGTATTGATCAAATCTTTTTTGTTTCCCAATGGCAGAAACTAAACCACATGAAATCTCCCTAGACATGAATGAACTCTATTCCTTCATCACTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACCTGGGGGACAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTGTTAGTTCAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAATTTACCCCCTTCTCCTCCACCTCTTTCAGAGCTTATTGGGACTGTTATGTTGACTGCCTTCGTGTTTTCTTTTTGTGGAGTTCTCCTTCAAAAGCCATTCCCAAAAATTGCACATCTGTTGCAAATGTTCGGTGCTCTATTGGCTGCAATTGGTGTCTGCATTATGGGAAGTCCTCTACTCCATCCAAACCTGACTTGGATCCGTTGGCTGGCGTGTGGCCTCATCTTGCCAGCCTTTATTACATCATTCAAGTGAATATGACAGAATATGCATCCCAAGGTCCGGAGATGGACAGAGGGTGCAGTTCTGTAGAATCCATGCCCATGTGTTTTTATCTCTTTGACAGTCTCTGTTTCTTGACCTTGTGTGGTTCACCACCAAGACAACATCAGCTCCAATTTCCCTGAAAATTCATGTTATTCTACAACTTATATAGTGACATGATAACTCTGCCTGTGTCATGCCATAAGCATCATTTCTTCTACGCAGCCGGTCCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGACCATTGGATCTTGAGTTCTAAAGACGGAGGCTTAAAGTATAAGTAGCCATATTTTCATCGAAGTAGACTAGTACTAAAGATGGCAGCATCAAGAAAGATGGATTCTCTGTTGGAGTAGACTGATGCAGAGGAACCACATATTGCTGAAGCTTAGTCATCCTAAGATATAAATTAAAATCTTGTCGACGAAAGAAAAAGTTTACATATTTTTTAGTCAGTGCAATTAATAGTGGAATGGGCATGATATGTTGAATATTATTAGAAAATATCTATAAACTATGCTGTTGTTCGTACAACATGGGTGACGCACACACATGAGAACTACAACAAAGACAATAATAAATCAAGGTTCACAAGAATATCCATCCATAACAAGAAATAAACTCTCTAGAGGCTGCAGACACAAGTGTTCACTAAAATCGTGCGGACTCCAATTGAGAGTAACTGATTACAAATAAAGAAAATTTAATTATGTCCTCTCCAGTTCTGCCTCGGTCTCATGCAAGTAACTGAGGCAACAAAGAGAAGAAAAGGGGAGGTTTCAATGTCGCACAATGCTCGTATGGCCTGAGATACAAGTTCCCTGCAGACCATGAATTTAAGTGCTACCTATATTGCTTACTTTCCCTAAATTATTTGAAAATATCTAAATGGAGAGTTAACATACATAATTAAGCTATAAAAAAAAGGTAAGAAAAGAAAGAGGTAATTTGAAAGACAGCAGAGCAATCAGAGAACTTTGAAGACCAGGATGAATGTAATTTCCACATCAATTTCAGATAACAAAGTTTTCATCATTTTTCCTTGCTTCTCTTACAACAAGTTGACCAATTCAATACAAAAACATATCTGCATCAATTCACTTATCCTTGAAGGATATCAAAACCACATTTTCCTTTAAAAATAATGTAAAGTCAACAAACATAAGGCAACAACAATCAGAGAACTTTGAAGGCATTGCACAACATGAGTTAGGCACATCATGTATTCACCTCAAAAAAACCTCATCATTTTGTTTGGCTACTTCTTACATCCTTTAAGTAAAGACAACCCCATGAAAAGGAAACAGGACATTTCGAAAGTTCACATTTATAAGACGACTTTATAGTTGTTTCTTTGGCCAAGCAGGGTTGAGCTGGAGAAAAACTTCGCCCATAACCATAGATGTAAAAGCCAAAATGAATGTAGCACCATAAGTATATACCCTTTTCTCGATTTTCCTTGTCACTAAACTCGAAGAAGCAAGGGGCTATTTGGTGCATCAAATCATAAAGTAAAAGGAAATACAAATATTTATGCTAATGGCTAAGTAATGCGCCGCTTACCAGAGAATGGATTGGAAGAAGCTGATCTCCAGATTAGCCCCAATGGGCAAAGGTTTTCAGGTTGCGGCAATTGTGAACCAACGTATCGGCTTTTATAGAAGTTTGACGGATTAGGGTTTTAGGAATCCTCGATTTGTTGTTCCTACGAGATTGTTGACTCCGTTAATTCGAAAATACATAAAAAGATGCTT

Coding sequence (CDS)

ATGGCAGAAACTAAACCACATGAAATCTCCCTAGACATGAATGAACTCTATTCCTTCATCACTGCAGTCACAAATAGAAATCCTGGAATAAGCAGTTGTACCTGGGGGACAGCAGCATCAGATTGCCTGCCAATTTACATCAAAATGCAGAGGCCTTCACCAGTCAACAGCCCTCAGTTTGGGAACACATTTGTTAGTTCAAATTTTCAGGCCATTTTAGGCTTGTTTCTCAATTTACCCCCTTCTCCTCCACCTCTTTCAGAGCTTATTGGGACTGTTATGTTGACTGCCTTCGTGTTTTCTTTTTGTGGAGTTCTCCTTCAAAAGCCATTCCCAAAAATTGCACATCTGTTGCAAATGTTCGGTGCTCTATTGGCTGCAATTGGTGTCTGCATTATGGGAAGTCCTCTACTCCATCCAAACCTGACTTGGATCCGTTGGCTGGCGTGTGGCCTCATCTTGCCAGCCTTTATTACATCATTCAAGTGA

Protein sequence

MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQFGNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK
Homology
BLAST of IVF0012066 vs. ExPASy TrEMBL
Match: A0A5D3BEH8 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00440 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.6e-88
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60
           MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQM 120
           GNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQM
Sbjct: 61  GNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQM 120

Query: 121 FGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
           FGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK
Sbjct: 121 FGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 162

BLAST of IVF0012066 vs. ExPASy TrEMBL
Match: A0A0A0KQ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.5e-62
Identity = 126/164 (76.83%), Postives = 136/164 (82.93%), Query Frame = 0

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60
           MAET PHEISLDMN+L S I AVTNRNPGISSCTWG AASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFVSSNFQAILGLFLNLPP--SPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLL 120
           GNTF+S  FQAI+GLFL+L P  S P  S L   VMLT+F+FS+ GV+LQKPFPK A LL
Sbjct: 61  GNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120

Query: 121 QMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
           Q FGAL AAIG CI+GS LL+PN TWI WLA GLILPAFI SFK
Sbjct: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164

BLAST of IVF0012066 vs. ExPASy TrEMBL
Match: A0A5A7U7U1 (Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00420 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.6e-30
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 0

Query: 13  MNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ----FGNTFVSSN 72
           MNELYSFITA+  RNP I+S          LPI I MQRPSP NS +     G T +   
Sbjct: 1   MNELYSFITAINERNPEINS----------LPICITMQRPSPANSSKTENNVGKTILGLT 60

Query: 73  FQAILGLFLNLPPSPPP-LSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGALLAA 132
           FQA+L LF+  P S PP L+ L    +L +F  SF G+ LQ  FP+IA L +  GAL+AA
Sbjct: 61  FQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAA 120

Query: 133 IGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
           IGVCI+ S L+H N  WI WLA G  L AF+ SF+
Sbjct: 121 IGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR 145

BLAST of IVF0012066 vs. ExPASy TrEMBL
Match: A0A0A0KJN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 7.6e-30
Identity = 78/165 (47.27%), Postives = 98/165 (59.39%), Query Frame = 0

Query: 3   ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ--- 62
           E+   +IS+DMN LYS IT++  RNP I+           LPI I MQ  SP NS +   
Sbjct: 2   ESSSQQISIDMNHLYSLITSINERNPEING----------LPICIIMQTASPANSSKTEN 61

Query: 63  -FGNTFVSSNFQAILGLFLNLPPSPPP-LSELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122
             G T +   FQA+L LF+    S PP L+ L G  +L +F  SF GV LQ  FP+IA L
Sbjct: 62  NVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALL 121

Query: 123 LQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 163
            +  GAL+AAIGVCI+ S L+H N  WI WLACG  L AF+ SF+
Sbjct: 122 FEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

BLAST of IVF0012066 vs. ExPASy TrEMBL
Match: A0A0A0KJP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-23
Identity = 68/168 (40.48%), Postives = 94/168 (55.95%), Query Frame = 0

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPV---NS 60
           MA T  H+ SLDM+   SFI  ++ RN G+  C      S+CLP++I+MQ+       +S
Sbjct: 1   MASTS-HQTSLDMSAFSSFIRTISQRNYGLGCC---CTPSNCLPVFIRMQQSPQATADSS 60

Query: 61  PQFGNTFVSSNFQAILGLFLNLPP-SPPP-LSELIGTVMLTAFVFSFCGVLLQKPFPKIA 120
            + G   +S +FQA+L LF++ PP SPPP L       +  +F  SF  + L   FP+ A
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 HLLQMFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 163
           HL +  GAL +A GVC + S LL H N  WI W+AC   +  F  SFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

BLAST of IVF0012066 vs. NCBI nr
Match: KAA0050244.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98162.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 332 bits (852), Expect = 4.93e-115
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60
           MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQM 120
           GNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQM
Sbjct: 61  GNTFVSSNFQAILGLFLNLPPSPPPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQM 120

Query: 121 FGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 162
           FGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK
Sbjct: 121 FGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 162

BLAST of IVF0012066 vs. NCBI nr
Match: KGN49806.1 (hypothetical protein Csa_004683 [Cucumis sativus])

HSP 1 Score: 246 bits (628), Expect = 7.43e-81
Identity = 126/164 (76.83%), Postives = 136/164 (82.93%), Query Frame = 0

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQF 60
           MAET PHEISLDMN+L S I AVTNRNPGISSCTWG AASDCLPIYIKMQRPSPVNSPQF
Sbjct: 1   MAETPPHEISLDMNKLNSLIFAVTNRNPGISSCTWGGAASDCLPIYIKMQRPSPVNSPQF 60

Query: 61  GNTFVSSNFQAILGLFLNLPPSP--PPLSELIGTVMLTAFVFSFCGVLLQKPFPKIAHLL 120
           GNTF+S  FQAI+GLFL+L PS   P  S L   VMLT+F+FS+ GV+LQKPFPK A LL
Sbjct: 61  GNTFLSLTFQAIVGLFLSLNPSSSSPLPSRLFAAVMLTSFIFSYDGVILQKPFPKTAQLL 120

Query: 121 QMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 162
           Q FGAL AAIG CI+GS LL+PN TWI WLA GLILPAFI SFK
Sbjct: 121 QTFGALFAAIGTCIIGSLLLYPNFTWICWLAAGLILPAFIISFK 164

BLAST of IVF0012066 vs. NCBI nr
Match: KAA0050246.1 (putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ98160.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa])

HSP 1 Score: 139 bits (351), Expect = 5.44e-39
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 0

Query: 13  MNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ----FGNTFVSSN 72
           MNELYSFITA+  RNP I+S          LPI I MQRPSP NS +     G T +   
Sbjct: 1   MNELYSFITAINERNPEINS----------LPICITMQRPSPANSSKTENNVGKTILGLT 60

Query: 73  FQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAHLLQMFGALLAA 132
           FQA+L LF+  P S PPL + L    +L +F  SF G+ LQ  FP+IA L +  GAL+AA
Sbjct: 61  FQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALLFEKIGALIAA 120

Query: 133 IGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 162
           IGVCI+ S L+H N  WI WLA G  L AF+ SF+
Sbjct: 121 IGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR 145

BLAST of IVF0012066 vs. NCBI nr
Match: KGN49803.1 (hypothetical protein Csa_004681 [Cucumis sativus])

HSP 1 Score: 137 bits (346), Expect = 4.33e-38
Identity = 78/165 (47.27%), Postives = 98/165 (59.39%), Query Frame = 0

Query: 3   ETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPVNSPQ--- 62
           E+   +IS+DMN LYS IT++  RNP I+           LPI I MQ  SP NS +   
Sbjct: 2   ESSSQQISIDMNHLYSLITSINERNPEING----------LPICIIMQTASPANSSKTEN 61

Query: 63  -FGNTFVSSNFQAILGLFLNLPPSPPPL-SELIGTVMLTAFVFSFCGVLLQKPFPKIAHL 122
             G T +   FQA+L LF+    S PPL + L G  +L +F  SF GV LQ  FP+IA L
Sbjct: 62  NVGTTILGLTFQAVLALFITSSTSSPPLLTHLFGAAVLISFAVSFPGVFLQDGFPRIALL 121

Query: 123 LQMFGALLAAIGVCIMGSPLLHPNLTWIRWLACGLILPAFITSFK 162
            +  GAL+AAIGVCI+ S L+H N  WI WLACG  L AF+ SF+
Sbjct: 122 FEKIGALIAAIGVCILASLLIHQNFAWISWLACGFSLMAFLLSFR 156

BLAST of IVF0012066 vs. NCBI nr
Match: KGN49808.1 (hypothetical protein Csa_004650 [Cucumis sativus])

HSP 1 Score: 117 bits (292), Expect = 7.67e-30
Identity = 68/168 (40.48%), Postives = 94/168 (55.95%), Query Frame = 0

Query: 1   MAETKPHEISLDMNELYSFITAVTNRNPGISSCTWGTAASDCLPIYIKMQRPSPV---NS 60
           MA T  H+ SLDM+   SFI  ++ RN G+  C      S+CLP++I+MQ+       +S
Sbjct: 1   MASTS-HQTSLDMSAFSSFIRTISQRNYGLGCCC---TPSNCLPVFIRMQQSPQATADSS 60

Query: 61  PQFGNTFVSSNFQAILGLFLNLPP-SPPPLS-ELIGTVMLTAFVFSFCGVLLQKPFPKIA 120
            + G   +S +FQA+L LF++ PP SPPPL        +  +F  SF  + L   FP+ A
Sbjct: 61  QKLGKIILSLSFQAVLALFISSPPTSPPPLLIHFFAAAVFISFAVSFAALFLHNSFPRTA 120

Query: 121 HLLQMFGALLAAIGVCIMGSPLL-HPNLTWIRWLACGLILPAFITSFK 162
           HL +  GAL +A GVC + S LL H N  WI W+AC   +  F  SFK
Sbjct: 121 HLFEKVGALFSAFGVCFIASFLLVHQNFAWICWVACTFSIIVFALSFK 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BEH81.6e-88100.00Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0KQ031.5e-6276.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136900 PE=4 SV=1[more]
A0A5A7U7U12.6e-3050.32Putative Ileal sodium/bile acid cotransporter OS=Cucumis melo var. makuwa OX=119... [more]
A0A0A0KJN87.6e-3047.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G136870 PE=4 SV=1[more]
A0A0A0KJP21.8e-2340.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G137410 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAA0050244.14.93e-115100.00putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KGN49806.17.43e-8176.83hypothetical protein Csa_004683 [Cucumis sativus][more]
KAA0050246.15.44e-3950.32putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa] >TYJ981... [more]
KGN49803.14.33e-3847.27hypothetical protein Csa_004681 [Cucumis sativus][more]
KGN49808.17.67e-3040.48hypothetical protein Csa_004650 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0012066.1IVF0012066.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane