IVF0011884 (gene) Melon (IVF77) v1

Overview


Name	IVF0011884
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Rad60-SLD domain-containing protein
Location	chr10: 1241695 .. 1244121 (-)
RNA-Seq Expression	IVF0011884
Synteny	IVF0011884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCGTCTCGCTAGGTAACGCTTCGATGGTGAACGGACAGTGAGTTTGAATTTCCCGGCCGGATACGACGAATCTTGATCCAAGAAGAGCCTCACGAATTTAGGTTTCGAGGTCTTTGACAATGGTGAGTCTGTTTCTATCTTTAATTCCGCGGGCACGGGACTCTTTTCTGTTCATTTCTACTCCTGCTTTTCCTTCCTCTCTCACATGTCAATTAGCTTTGAGTTTTCATTTTCAGGCGGATTCCGCTGAAGAATTTGAACCCTTGTTCGATTACAGCCGCGTGCAGCCTCCCTCCGTTGTCTGTCTTGATGGTAAAAGTCCTTAGTGATATTTGAATTTAAATAAAGTTAGAACTTTCTATTTCAGTGTGTTTGATGTGATTATAATTATTTTTTAGCAAGAAATTTCGAAATTGGGATTCCTTGTGCTTGCAATCTTTCAAACTGATGGTTCTTGTGCTTTTTTTTTCTTTTATTTGGATCAACAACATTAGACGAGGATTCAGACGCAGACAAATCTCCGGCGCCTTTTACAAAGCGAGCAAAGATTGCGAATCTAGCGGTATATTATTCCCTTCATGTAGTGAAATAGTGGAGTTTCTTTTTACCTAAGATTAGTGTTCGTTGAAACAGTCGGTAAATCTTGTTTTTTTGTGACCATTTCCTTTTAATCAATATTTAGGCTACGAGTTCGGTGAATGGTAACCCAAAGGAGAAACAAGTGGAAATTGAAGATAATGAGGAAGATTGGCTTCCTCCTCCACCGAAAGTGTTGGTTGATGGAAATAATAGGCGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTATTCCAACTTAGTGGTATGCATCTATTGCTTGATTAATCAATTAATATAAAATGGAACTCTGATTTTTTATGTGCATAAGCTTCCATTGCCTTTGTCTCTTGCCATTTTTCCTTTGCATATCATATTGTAATCTGTAGGTTAAAGAAGCAAGAGTTGGCCTCTGTTGCTTTATCAGCTAAAAACTTGCTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGGAACACGTCCAAGGACTCTCTGGAACCTGATTTGGATGTCCAAACTCCAGTTGTTTCTAAAGAAAGAGCAAAAATTGTCATTTCTGTACGTGACAGTGACAAGGAAGAGCTCAAACAGTATCGCCTGTTTGTGGTATGTTCTCCTCCATGTCTGCGTGTTGTTCACAATTCCACAATTGGCATTCTTTAATTGCAACCATCCTGTTCTGTCAATATATATCATATGTTTGCGATCACTGTTTTTGATATGCATGCAAGATGCCTTTTAGTTCCCCTGAACTCGTGGTAAGCATTTTTAGATATAGGGAAACGAATGAATATGATGAAGTTGAATAGTGAGAAAAGGAAATAAGTATAGACTATGATATTGGTAGCAAATCTTGAAAACGTTGATTAATGGCTGGGGGTTGTGGAGAACTTCCTTCAATTTCCGAAGTAGTCTCTTTATTATCTTGAAAAGTGTTTGGTTTCTTGGGTACTTTCTAGTTGTCAAGACTGATTTGCCACATATACCCTTTAATTTGATTTTCTTGTTCTTCCCTTCCACGTTATGATTGCCTTAACTTCTCTATTTTTATGCGGTGATCACTAGGTTTGAAGGTGGATTTAGATTTTACTTCTGTTACATTAGTGTTCTGGATAGTTTCTGCAATTATGAATGTCGGTTGTCTTAGAATAATGGGTCTTTTCTATGAAACATCAACGCCCAAGCTATAGTGCAAGTATTATAGGTCTCTCATGGTAATGATACTTCAGATGTTATTTGATTGAGTTACTTTAGGAGTAACTCCCTCATCTTATACCCCGGTTTGTTGGTAGGTATTGCTTTTTCTTATCTCCATATTATCTGTCTTTATATAACCCTGCTATGATAGTGTTCCGTATGTAACTTTTTGACGTGAGTGTGACACTTTTAAAAGTGTTCCATACATACTCTAATATGGTTTTGGAATTTTATTGTTTGTATAGGATGACAATTTTGAGCGACTTTTCAAGATATACGCAGACAAACTTAAAATCGATCCTGAGAGTTTGGTCTTCGTTTTTGACGGGGATAAAATCGGCCCAAATGATACCCCAGGTGGCCTTGGCATGGAAGATGATGATATGATCGAAGTTAACATCAAGTCGAGTTGAGTAAGGTTTTTGAGTGTATATTTTGTGAAATACTTAACCAGTTTTGGGGATGAGAGACTTGGAAAATGCCAAATTCAATACTTTGTAATTTGTACCGTAAGATGATCAAATCGTTTATAGAAGGCTGTGAAAAGGTTTCTTTTGTGCGGTAAATTTGTTTGGTAAGCACATTGAGATAAATGAAAAAAATAAAAACAATAGATTTTACTCATTTTAATGCTCATTTTAAAAAAGC

mRNA sequence

GTGGCGTCTCGCTAGGTAACGCTTCGATGGTGAACGGACAGTGAGTTTGAATTTCCCGGCCGGATACGACGAATCTTGATCCAAGAAGAGCCTCACGAATTTAGGTTTCGAGGTCTTTGACAATGGCGGATTCCGCTGAAGAATTTGAACCCTTGTTCGATTACAGCCGCGTGCAGCCTCCCTCCGTTGTCTGTCTTGATGACGAGGATTCAGACGCAGACAAATCTCCGGCGCCTTTTACAAAGCGAGCAAAGATTGCGAATCTAGCGGCTACGAGTTCGGTGAATGGTAACCCAAAGGAGAAACAAGTGGAAATTGAAGATAATGAGGAAGATTGGCTTCCTCCTCCACCGAAAGTGTTGGTTGATGGAAATAATAGGCGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCTGTTGCTTTATCAGCTAAAAACTTGCTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGGAACACGTCCAAGGACTCTCTGGAACCTGATTTGGATGTCCAAACTCCAGTTGTTTCTAAAGAAAGAGCAAAAATTGTCATTTCTGTACGTGACAGTGACAAGGAAGAGCTCAAACAGTATCGCCTGTTTGTGGATGACAATTTTGAGCGACTTTTCAAGATATACGCAGACAAACTTAAAATCGATCCTGAGAGTTTGGTCTTCGTTTTTGACGGGGATAAAATCGGCCCAAATGATACCCCAGGTGGCCTTGGCATGGAAGATGATGATATGATCGAAGTTAACATCAAGTCGAGTTGAGTAAGGTTTTTGAGTGTATATTTTGTGAAATACTTAACCAGTTTTGGGGATGAGAGACTTGGAAAATGCCAAATTCAATACTTTGTAATTTGTACCGTAAGATGATCAAATCGTTTATAGAAGGCTGTGAAAAGGTTTCTTTTGTGCGGTAAATTTGTTTGGTAAGCACATTGAGATAAATGAAAAAAATAAAAACAATAGATTTTACTCATTTTAATGCTCATTTTAAAAAAGC

Coding sequence (CDS)

ATGGCGGATTCCGCTGAAGAATTTGAACCCTTGTTCGATTACAGCCGCGTGCAGCCTCCCTCCGTTGTCTGTCTTGATGACGAGGATTCAGACGCAGACAAATCTCCGGCGCCTTTTACAAAGCGAGCAAAGATTGCGAATCTAGCGGCTACGAGTTCGGTGAATGGTAACCCAAAGGAGAAACAAGTGGAAATTGAAGATAATGAGGAAGATTGGCTTCCTCCTCCACCGAAAGTGTTGGTTGATGGAAATAATAGGCGTGGGGAAGATTCCACATTGAAGGAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCTGTTGCTTTATCAGCTAAAAACTTGCTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGGAACACGTCCAAGGACTCTCTGGAACCTGATTTGGATGTCCAAACTCCAGTTGTTTCTAAAGAAAGAGCAAAAATTGTCATTTCTGTACGTGACAGTGACAAGGAAGAGCTCAAACAGTATCGCCTGTTTGTGGATGACAATTTTGAGCGACTTTTCAAGATATACGCAGACAAACTTAAAATCGATCCTGAGAGTTTGGTCTTCGTTTTTGACGGGGATAAAATCGGCCCAAATGATACCCCAGGTGGCCTTGGCATGGAAGATGATGATATGATCGAAGTTAACATCAAGTCGAGTTGA

Protein sequence

MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKEKQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKIYADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS

Homology

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BLAST of IVF0011884 vs. ExPASy Swiss-Prot
Match: Q9VCP1 (Uncharacterized protein CG4449 OS=Drosophila melanogaster OX=7227 GN=CG4449 PE=1 SV=4)

HSP 1 Score: 50.4 bits (119), Expect = 3.0e-05
Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 0


Query: 172 DNFERLFKIYADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKS 225
           DNF+ +F   A++L  DP ++   FDGD + PNDTP    ME +++I++ IK+
Sbjct: 372 DNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDLKIKA 424

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BLAST of IVF0011884 vs. ExPASy Swiss-Prot
Match: P55853 (Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.9e-05
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 151 IVISVRDSDKEELKQYRLFVDDNFERLFKIYADKLKIDPESLVFVFDGDKIGPNDTPGGL 210
           I I V   D  E+  +R+    +  +L K YAD+  +   SL F+FDG +I  +DTP  L
Sbjct: 15  IKIKVVGQDSNEV-HFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDGRRINDDDTPKTL 74

Query: 211 GMEDDDMIEV 221
            MEDDD+IEV
Sbjct: 75  EMEDDDVIEV 83

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BLAST of IVF0011884 vs. ExPASy Swiss-Prot
Match: B3H5R8 (Putative small ubiquitin-related modifier 8 OS=Arabidopsis thaliana OX=3702 GN=SUMO8 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 151 IVISVRDSDKEELKQYRLFVDDNFERLFKIYADKLKIDPESLVFVFDGDKIGPNDTPGGL 210
           I + V++ D +    +R+  D    ++   Y+DK+ ++  +L F+FDG++I  N TP  L
Sbjct: 15  ITVKVKNQD-DICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPNEL 74

Query: 211 GMEDDDMIE 220
           G+ED+D IE
Sbjct: 75  GLEDEDEIE 82

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BLAST of IVF0011884 vs. ExPASy TrEMBL
Match: A0A5A7SVU4 (Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001350 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI
Sbjct: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 226
           YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of IVF0011884 vs. ExPASy TrEMBL
Match: A0A1S3BF31 (uncharacterized protein LOC103489317 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489317 PE=3 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI
Sbjct: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 226
           YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of IVF0011884 vs. ExPASy TrEMBL
Match: A0A0A0KWH7 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 2.3e-109
Identity = 210/225 (93.33%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKI N AATSSVNGNPKE
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIVNPAATSSVNGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIED EEDWLPPPPKVLVD  NR  EDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDKEEDWLPPPPKVLVDAENRHVEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AKVDVGNTS D LEPDLDVQTPV SKERAKIVISVRDSDKEELKQYRLFVDD FERLFK+
Sbjct: 121 AKVDVGNTSMDPLEPDLDVQTPVASKERAKIVISVRDSDKEELKQYRLFVDDKFERLFKL 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 226
           YADKLKIDP+SLVFVFDGDK+GP+DTPGGLGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPKSLVFVFDGDKVGPDDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of IVF0011884 vs. ExPASy TrEMBL
Match: A0A6J1JEF8 (uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.5e-89
Identity = 175/225 (77.78%), Postives = 195/225 (86.67%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MAD AEEFEPLF+YSRV P SV CLD+EDSDA  SP PF+KR++I N A TS V+GNPKE
Sbjct: 1   MADYAEEFEPLFNYSRVHPRSVDCLDEEDSDACMSPEPFSKRSRILNPAVTSLVDGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIED EEDWLPPPPKV VD  N  GEDSTLKELRL K ELASV LSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVTLSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AK+DVGNT +D LEP LD Q P+ SKERAKIVISVRDSDKEELKQ+R+F+DD FERLFK+
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRIFMDDKFERLFKM 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 226
           YA+K KIDP+SLVF+FDGDK+GP+DTP GLGMEDDDMI+VNI+ S
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVGPDDTPVGLGMEDDDMIDVNIRPS 225

[Close]

BLAST of IVF0011884 vs. ExPASy TrEMBL
Match: A0A6J1H158 (uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC111458628 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.5e-89
Identity = 177/225 (78.67%), Postives = 195/225 (86.67%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MAD AEEFEPLFDYSRVQP SV CLDDEDSDA  SP PF+KR++I N A TS V+G  K+
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGIRKD 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIED EEDWLPPPPKV VD  N  GEDSTLKELRL K ELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AK+DVGNT +D LEP LD Q P+ SKERAKIVISVRDSDKEELKQ+RLF+DD FERLFK+
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 226
           YA+K KIDP+SLVF+FDGDK+ P+DTP GLGMEDDDMI+VNI+SS
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVSPDDTPTGLGMEDDDMIDVNIRSS 225

[Close]

BLAST of IVF0011884 vs. NCBI nr
Match: XP_008446647.1 (PREDICTED: uncharacterized protein LOC103489317 isoform X1 [Cucumis melo] >KAA0034593.1 putative Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK09144.1 putative Ubiquitin-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 434 bits (1117), Expect = 2.37e-153
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI
Sbjct: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225
           YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of IVF0011884 vs. NCBI nr
Match: XP_004135076.1 (uncharacterized protein LOC101214853 [Cucumis sativus])

HSP 1 Score: 405 bits (1041), Expect = 9.10e-142
Identity = 210/225 (93.33%), Postives = 214/225 (95.11%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKI N AATSSVNGNPKE
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIVNPAATSSVNGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIED EEDWLPPPPKVLVD  NR  EDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDKEEDWLPPPPKVLVDAENRHVEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AKVDVGNTS D LEPDLDVQTPV SKERAKIVISVRDSDKEELKQYRLFVDD FERLFK+
Sbjct: 121 AKVDVGNTSMDPLEPDLDVQTPVASKERAKIVISVRDSDKEELKQYRLFVDDKFERLFKL 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225
           YADKLKIDP+SLVFVFDGDK+GP+DTPGGLGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPKSLVFVFDGDKVGPDDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of IVF0011884 vs. NCBI nr
Match: KGN52648.2 (hypothetical protein Csa_008468 [Cucumis sativus])

HSP 1 Score: 392 bits (1007), Expect = 1.20e-136
Identity = 206/225 (91.56%), Postives = 210/225 (93.33%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MADSAEEFEPLFDYSRVQPPSVVCLD    DADKSPAPFTKRAKI N AATSSVNGNPKE
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLD----DADKSPAPFTKRAKIVNPAATSSVNGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIED EEDWLPPPPKVLVD  NR  EDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDKEEDWLPPPPKVLVDAENRHVEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AKVDVGNTS D LEPDLDVQTPV SKERAKIVISVRDSDKEELKQYRLFVDD FERLFK+
Sbjct: 121 AKVDVGNTSMDPLEPDLDVQTPVASKERAKIVISVRDSDKEELKQYRLFVDDKFERLFKL 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225
           YADKLKIDP+SLVFVFDGDK+GP+DTPGGLGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPKSLVFVFDGDKVGPDDTPGGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of IVF0011884 vs. NCBI nr
Match: XP_038891511.1 (uncharacterized protein LOC120080907 [Benincasa hispida])

HSP 1 Score: 374 bits (959), Expect = 2.75e-129
Identity = 196/225 (87.11%), Postives = 206/225 (91.56%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MADSAEEFEPLFDYSRVQP SVVCLDDEDSDADKSPAPF+KR KI N AATS V+ NPKE
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDADKSPAPFSKRVKIVNPAATSLVDSNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEIED EEDWLPPPPKVLVD  N  GEDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDKEEDWLPPPPKVLVDAENMCGEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AKVDVGN   DSLEPDLDVQTP+ SKERAKIVISVRDSDKEELKQ+RLFVDD FERLFK+
Sbjct: 121 AKVDVGNKP-DSLEPDLDVQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKM 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225
           YADK KIDP++L+FVFDGDK+GP+DTP  LGMEDDDMIEVNIKSS
Sbjct: 181 YADKHKIDPKNLIFVFDGDKVGPDDTPVSLGMEDDDMIEVNIKSS 224

[Close]

BLAST of IVF0011884 vs. NCBI nr
Match: XP_023553495.1 (uncharacterized protein LOC111810893 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343 bits (881), Expect = 2.17e-117
Identity = 179/225 (79.56%), Postives = 197/225 (87.56%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           MAD AEEFEPLFDYSRVQP SV CLDDEDSDA  SP PF+KR++I N A TS V+GNPKE
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGNPKE 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
           KQVEI D EEDWLPPPPKVLVD  N  GEDSTLKELRLKK ELA VALSAKNLLREVEES
Sbjct: 61  KQVEIVDEEEDWLPPPPKVLVDAKNMCGEDSTLKELRLKKLELALVALSAKNLLREVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AK+DVGNT +D LEP LD Q P+ SKERAKIVISVRDS+KEELKQ+RLF+DD FERLFK+
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSEKEELKQFRLFMDDKFERLFKM 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225
           YA+K KIDP+SLVF+FDGDK+GP+DTP GLGMEDDDMI+VNI+ S
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVGPDDTPIGLGMEDDDMIDVNIRPS 225

[Close]

BLAST of IVF0011884 vs. TAIR 10
Match: AT1G68185.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 4.4e-44
Identity = 102/225 (45.33%), Postives = 143/225 (63.56%), Query Frame = 0


Query: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60
           M    E+ EPLFDY RVQP + VC+DD+D DA  +P P  K+AK      + +V     +
Sbjct: 1   MGGEGEDLEPLFDYRRVQPANFVCIDDDDDDASVTPIP--KKAK-----TSQTVEKLDDD 60

Query: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
            +V     ++DWL PPPKV+ D +    EDST+K LR KK EL S   +  ++++EVEES
Sbjct: 61  VKVIEVTGDDDWLLPPPKVIFDKSKDSVEDSTIKALRSKKMELMSFTKTVGDVMQEVEES 120

Query: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180
           AK +V  +   S E    + +   + +RAKIVI+++D D +  K  R+F D+ FER+ K+
Sbjct: 121 AKREVEESRNPSSETAAQLPSE-PTNDRAKIVITIQDKDGQ--KTLRVFADEKFERVIKL 180

Query: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 226
           Y DK K+DP++LVF+FDGDKI P+ TP  LGMED DMIEV+ K +
Sbjct: 181 YTDKAKLDPQNLVFIFDGDKIDPSTTPSELGMEDHDMIEVHTKKT 215

[Close]

BLAST of IVF0011884 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 24/69 (34.78%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 151 IVISVRDSDKEELKQYRLFVDDNFERLFKIYADKLKIDPESLVFVFDGDKIGPNDTPGGL 210
           I + V++ D +    +R+  D    ++   Y+DK+ ++  +L F+FDG++I  N TP  L
Sbjct: 15  ITVKVKNQD-DICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPNEL 74

Query: 211 GMEDDDMIE 220
           G+ED+D IE
Sbjct: 75  GLEDEDEIE 82

[Close]

BLAST of IVF0011884 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 43.1 bits (100), Expect = 3.4e-04
Identity = 21/78 (26.92%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 142 PVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKIYADKLKIDPESLVFVFDGDKI 201
           P+  ++ A +++ V+  D +E+  ++       ++L  +Y D+  +  ++  F+F+G +I
Sbjct: 9   PIDQEQEAHVILKVKSQDGDEV-LFKNKKSAPLKKLMYVYCDRRGLKLDAFAFIFNGARI 68

Query: 202 GPNDTPGGLGMEDDDMIE 220
           G  +TP  L MED D+I+
Sbjct: 69  GGLETPDELDMEDGDVID 85

[Close]

BLAST of IVF0011884 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 42.0 bits (97), Expect = 7.6e-04
Identity = 23/71 (32.39%), Postives = 37/71 (52.11%), Query Frame = 0


Query: 149 AKIVISVRDSDKEELKQYRLFVDDNFERLFKIYADKLKIDPESLVFVFDGDKIGPNDTPG 208
           A I + V+  D  E+  +R+      ++L   Y D+  +D  S+ F+FDG ++    TP 
Sbjct: 16  AHINLKVKGQDGNEV-FFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPD 75

Query: 209 GLGMEDDDMIE 220
            L MED D I+
Sbjct: 76  ELDMEDGDEID 85

The following BLAST results are available for this feature:

BLAST of IVF0011884 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9VCP1	3.0e-05	41.51	Uncharacterized protein CG4449 OS=Drosophila melanogaster OX=7227 GN=CG4449 PE=1...	[more]
P55853	3.9e-05	42.86	Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1...	[more]
B3H5R8	2.5e-04	34.78	Putative small ubiquitin-related modifier 8 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]

BLAST of IVF0011884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SVU4	3.5e-118	100.00	Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BF31	3.5e-118	100.00	uncharacterized protein LOC103489317 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KWH7	2.3e-109	93.33	Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 P...	[more]
A0A6J1JEF8	3.5e-89	77.78	uncharacterized protein LOC111483658 OS=Cucurbita maxima OX=3661 GN=LOC111483658...	[more]
A0A6J1H158	4.5e-89	78.67	uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]

BLAST of IVF0011884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446647.1	2.37e-153	100.00	PREDICTED: uncharacterized protein LOC103489317 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_004135076.1	9.10e-142	93.33	uncharacterized protein LOC101214853 [Cucumis sativus]	[more]
KGN52648.2	1.20e-136	91.56	hypothetical protein Csa_008468 [Cucumis sativus]	[more]
XP_038891511.1	2.75e-129	87.11	uncharacterized protein LOC120080907 [Benincasa hispida]	[more]
XP_023553495.1	2.17e-117	79.56	uncharacterized protein LOC111810893 [Cucurbita pepo subsp. pepo]	[more]

BLAST of IVF0011884 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68185.1	4.4e-44	45.33	Ubiquitin-like superfamily protein	[more]
AT5G55856.1	1.8e-05	34.78	Ubiquitin-like superfamily protein	[more]
AT5G55170.1	3.4e-04	26.92	small ubiquitin-like modifier 3	[more]
AT4G26840.1	7.6e-04	32.39	small ubiquitin-like modifier 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 136..225 e-value: 1.1E-19 score: 72.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..87
None	No IPR available	PANTHER	PTHR47813	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 1..225
None	No IPR available	CDD	cd01763	Ubl_SUMO_like	coord: 150..220 e-value: 7.299E-22 score: 83.3985
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 151..222 e-value: 2.4E-13 score: 49.7
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 151..225 score: 8.938011
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 142..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0011884.2	IVF0011884.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding