Homology
BLAST of IVF0010567 vs. ExPASy Swiss-Prot
Match:
P19684 (33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 142.5 bits (358), Expect = 7.3e-33
Identity = 86/233 (36.91%), Postives = 133/233 (57.08%), Query Frame = 0
Query: 70 SAVQEVSLEEASEETQDVN-QKKKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQK-N 129
SA +E +EE E + + + +LY+ NLP+S++ + E+F + GTV++VEI+ +
Sbjct: 92 SAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVT 151
Query: 130 GRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGPPPGE--- 189
RSRGFAFVTM S +EA+ AI+ FD ++ GR +KV F P P GE
Sbjct: 152 DRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNF-----------PEVPRGGEREV 211
Query: 190 --------------TVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGY 249
+ +KLYV+NL+W + S LRD F++ ++A+V++D SGRS G+
Sbjct: 212 MSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGF 271
Query: 250 GFVSFATREEAQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPE 284
GF++F++ E +AL ++ EL GRPLRL + + S P +VE+ PE
Sbjct: 272 GFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAPVSSPP---VVETSPE 310
BLAST of IVF0010567 vs. ExPASy Swiss-Prot
Match:
Q39061 (RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 PE=2 SV=1)
HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 93/314 (29.62%), Postives = 158/314 (50.32%), Query Frame = 0
Query: 2 ATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSRN 61
A S+ +P +SS S+S+L + P + KL + +PL+ + +
Sbjct: 15 AATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCAAETEA 74
Query: 62 PGGGGRLCSAVQ------------EVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKE 121
+ ++V+ E +EE + TQ ++ +LY+ NLP++++ ++ +
Sbjct: 75 SSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQ 134
Query: 122 LFGQCGTVSDVEIIKQK-NGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR 181
+FG+ GTV DV+I+ K RSRGF FVTM S +EA+ A+Q F+S +I GR +KV F
Sbjct: 135 IFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNF--- 194
Query: 182 FKRPPPPKPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDFFSESF 241
P P GE + +K+Y NL W + S L+D F +
Sbjct: 195 --------PEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQP 254
Query: 242 NPIAARVVFDSPSGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSERSVNESE 286
+ A+V+++ +GRS G+GF+SF + E Q+AL+++ G E+ GR LRL + +
Sbjct: 255 GVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREKPTV 314
BLAST of IVF0010567 vs. ExPASy Swiss-Prot
Match:
Q08935 (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 1.7e-29
Identity = 94/282 (33.33%), Postives = 146/282 (51.77%), Query Frame = 0
Query: 1 MATLESALPIIS--------PYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPIS 60
MA+ S+L +S P +S ++S F+ PS++ L +S SS S ++
Sbjct: 1 MASSASSLHFLSLTPQTLPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSCFSSRFVRKVT 60
Query: 61 PISFNSSRNPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFG 120
F+ + G ++ EE ++ + K+++ NLP+S + ELF
Sbjct: 61 LSDFDQIEDVEDG------------DDGVEEERNFSPDLKIFVGNLPFSADSAALAELFE 120
Query: 121 QCGTVSDVEIIKQK-NGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKR 180
+ G V VE+I K GRSRGF FVTM+S +E +AA Q+F+ E+ GR ++V
Sbjct: 121 RAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN-----SG 180
Query: 181 PPPPK---------PPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDS 240
PPP K G ++ N++YV NLAW V L FSE + A+VV+D
Sbjct: 181 PPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDR 240
Query: 241 PSGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSE 265
SGRS G+GFV++++ EE A+ SL+G +L GR +R+ +E
Sbjct: 241 DSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 265
BLAST of IVF0010567 vs. ExPASy Swiss-Prot
Match:
P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)
HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28
Identity = 69/193 (35.75%), Postives = 117/193 (60.62%), Query Frame = 0
Query: 74 EVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKN-GRSRG 133
EV +E EE Q+ + KL++ NLP+ + + LF Q G V E+I ++ +SRG
Sbjct: 119 EVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRG 178
Query: 134 FAFVTMASPDEAQAAIQKFDSQEISGRVIKV-EFAKRFKRPPPPKPPGPPPGETVNKLYV 193
F FVTM++ +EA+ A++ ++ +++GR++ V + A+R +RP P P E ++YV
Sbjct: 179 FGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERP----PRTFEQSYRIYV 238
Query: 194 SNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREEAQTALSSLEGK 253
N+ W + + L FSE ++ARVV+D +GRS G+GFV+ A+ E A+++L+G+
Sbjct: 239 GNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQ 298
Query: 254 ELMGRPLRLKFSE 265
L GR +R+ +E
Sbjct: 299 SLDGRTIRVNVAE 307
BLAST of IVF0010567 vs. ExPASy Swiss-Prot
Match:
P49313 (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=2 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 1.2e-27
Identity = 88/271 (32.47%), Postives = 138/271 (50.92%), Query Frame = 0
Query: 10 IISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSRNPGGGGRLC 69
++ P +S ++S F+ PS++ L +S S S ++ F+ + G
Sbjct: 18 LLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSCFSSRFVRKVTLPDFDQIEDVEDG---- 77
Query: 70 SAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQK-NG 129
+E EE ++ + K+++ NL +S + ELF + G V VE+I K G
Sbjct: 78 --------DEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTG 137
Query: 130 RSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPK------------ 189
RSRGF FVTM+S +E +AA Q+F+ E+ GR ++V PPP K
Sbjct: 138 RSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN-----SGPPPEKRENSSFRENSSF 197
Query: 190 ---PPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFV 249
G ++ N++YV NLAW V L FSE + A+VV+D SGRS G+GFV
Sbjct: 198 RGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFV 257
Query: 250 SFATREEAQTALSSLEGKELMGRPLRLKFSE 265
++++ EE A+ SL+G +L GR +R+ +E
Sbjct: 258 TYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 271
BLAST of IVF0010567 vs. ExPASy TrEMBL
Match:
A0A1S3BK84 (28 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490770 PE=4 SV=1)
HSP 1 Score: 547.7 bits (1410), Expect = 2.8e-152
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR
Sbjct: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
Query: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV 120
NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV
Sbjct: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV 120
Query: 121 EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP
Sbjct: 121 EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
Query: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE
Sbjct: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
Query: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 286
AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES
Sbjct: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 285
BLAST of IVF0010567 vs. ExPASy TrEMBL
Match:
A0A5A7UAR3 (28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001500 PE=4 SV=1)
HSP 1 Score: 539.3 bits (1388), Expect = 9.9e-150
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR
Sbjct: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
Query: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV 120
NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSD
Sbjct: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSD- 120
Query: 121 EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP
Sbjct: 121 -IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
Query: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE
Sbjct: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
Query: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 286
AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES
Sbjct: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 283
BLAST of IVF0010567 vs. ExPASy TrEMBL
Match:
A0A0A0L1U2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009490 PE=4 SV=1)
HSP 1 Score: 510.4 bits (1313), Expect = 4.9e-141
Identity = 265/288 (92.01%), Postives = 276/288 (95.83%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSS---SKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFN 60
M T+ES LPIISPY+SSSSS SKLCFNKLPS IKLRISFSSPLLSLNP TPISP SFN
Sbjct: 1 MVTIESPLPIISPYISSSSSSSASKLCFNKLPSPIKLRISFSSPLLSLNPTTPISPTSFN 60
Query: 61 SSRNPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTV 120
SSRN GGG RLCSA+QEV+LEEASEE QDVNQK+KLYIFNLPWSLSVVDIKELFGQCGTV
Sbjct: 61 SSRNRGGGARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTV 120
Query: 121 SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKP 180
SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR K+PPPPKP
Sbjct: 121 SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKP 180
Query: 181 PGPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFAT 240
PGPPPGETVNKLYVSNLAWKVRS+NLRDFFSE+FNPIAARVVFDSP+GRSAGYGFVSFAT
Sbjct: 181 PGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFAT 240
Query: 241 REEAQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 286
REEAQTALSSLEGKELMGRPLRLKFSER+VNE+ETPKEDIVESQPEES
Sbjct: 241 REEAQTALSSLEGKELMGRPLRLKFSERNVNEAETPKEDIVESQPEES 288
BLAST of IVF0010567 vs. ExPASy TrEMBL
Match:
A0A6J1E5Z7 (33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111431035 PE=4 SV=1)
HSP 1 Score: 478.0 bits (1229), Expect = 2.7e-131
Identity = 250/288 (86.81%), Postives = 265/288 (92.01%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISF---N 60
MATLESA+PIIS Y+SSSSSSKL LPSAIKLRISFSSPLLS NP T +SP+ N
Sbjct: 1 MATLESAIPIISQYISSSSSSKLSIRTLPSAIKLRISFSSPLLSFNPTTAVSPLPLFLTN 60
Query: 61 SSRNPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTV 120
SRN GGGGR CSAVQEVSLEEASEE QDVNQK+KLYIFNLPWS SVVDIKE FGQCGTV
Sbjct: 61 PSRNRGGGGRFCSAVQEVSLEEASEENQDVNQKRKLYIFNLPWSFSVVDIKEQFGQCGTV 120
Query: 121 SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKP 180
+DVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR K+PPPPKP
Sbjct: 121 TDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKP 180
Query: 181 PGPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFAT 240
PGPPPGETV+KLYVSNLAWK RS+NLR+FFSE+FNPIAARVVFDSPSG+SAGYGFVSFAT
Sbjct: 181 PGPPPGETVHKLYVSNLAWKARSTNLREFFSENFNPIAARVVFDSPSGKSAGYGFVSFAT 240
Query: 241 REEAQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 286
REEA+TALSSLEGKELMGRPLRLKFSER+V +SETPKED VESQPEES
Sbjct: 241 REEAETALSSLEGKELMGRPLRLKFSERTVVKSETPKEDTVESQPEES 288
BLAST of IVF0010567 vs. ExPASy TrEMBL
Match:
A0A6J1KZ42 (29 kDa ribonucleoprotein A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111500156 PE=4 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 5.1e-130
Identity = 252/294 (85.71%), Postives = 267/294 (90.82%), Query Frame = 0
Query: 1 MATLESALPIISPYV------SSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPI 60
MATLESA+PIIS Y+ SSSSSSKL F+KLPSAIKLRISFSSPLLSLNP T +SP+
Sbjct: 1 MATLESAIPIISQYIASSSSSSSSSSSKLSFHKLPSAIKLRISFSSPLLSLNPTTAVSPL 60
Query: 61 SF---NSSRNPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELF 120
N RN GGG R CSAVQEVSLEEASEE QDVNQK+KLYIFNLPWS SVVDIKE F
Sbjct: 61 PLFLTNPWRNRGGGDRFCSAVQEVSLEEASEENQDVNQKRKLYIFNLPWSFSVVDIKEQF 120
Query: 121 GQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKR 180
GQCGTV+DVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR K+
Sbjct: 121 GQCGTVTDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKK 180
Query: 181 PPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYG 240
PPPPKPPGPPPGETV+KLYVSNLAWK RS+NLR+FFSE+FNPIAARVVFDSPSG+SAGYG
Sbjct: 181 PPPPKPPGPPPGETVHKLYVSNLAWKARSTNLREFFSENFNPIAARVVFDSPSGKSAGYG 240
Query: 241 FVSFATREEAQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 286
FVSFATREEA+TALSSLEGKELMGRPLRLKFSERSV +SETPKED VESQPEES
Sbjct: 241 FVSFATREEAETALSSLEGKELMGRPLRLKFSERSVVKSETPKEDTVESQPEES 294
BLAST of IVF0010567 vs. NCBI nr
Match:
XP_008448669.1 (PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis melo])
HSP 1 Score: 550 bits (1417), Expect = 4.45e-197
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR
Sbjct: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
Query: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV 120
NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV
Sbjct: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV 120
Query: 121 EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP
Sbjct: 121 EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
Query: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE
Sbjct: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
Query: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 285
AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES
Sbjct: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 285
BLAST of IVF0010567 vs. NCBI nr
Match:
KAA0053033.1 (28 kDa ribonucleoprotein [Cucumis melo var. makuwa] >TYK11488.1 28 kDa ribonucleoprotein [Cucumis melo var. makuwa])
HSP 1 Score: 541 bits (1395), Expect = 9.33e-194
Identity = 283/285 (99.30%), Postives = 283/285 (99.30%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR
Sbjct: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
Query: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDV 120
NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSD
Sbjct: 61 NPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSD- 120
Query: 121 EIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP
Sbjct: 121 -IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGP 180
Query: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE
Sbjct: 181 PPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATREE 240
Query: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 285
AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES
Sbjct: 241 AQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 283
BLAST of IVF0010567 vs. NCBI nr
Match:
XP_011650340.1 (29 kDa ribonucleoprotein A, chloroplastic [Cucumis sativus] >KGN55743.1 hypothetical protein Csa_011017 [Cucumis sativus])
HSP 1 Score: 513 bits (1320), Expect = 3.02e-182
Identity = 265/288 (92.01%), Postives = 276/288 (95.83%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSS---KLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFN 60
M T+ES LPIISPY+SSSSSS KLCFNKLPS IKLRISFSSPLLSLNP TPISP SFN
Sbjct: 1 MVTIESPLPIISPYISSSSSSSASKLCFNKLPSPIKLRISFSSPLLSLNPTTPISPTSFN 60
Query: 61 SSRNPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTV 120
SSRN GGG RLCSA+QEV+LEEASEE QDVNQK+KLYIFNLPWSLSVVDIKELFGQCGTV
Sbjct: 61 SSRNRGGGARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTV 120
Query: 121 SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKP 180
SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR K+PPPPKP
Sbjct: 121 SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKP 180
Query: 181 PGPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFAT 240
PGPPPGETVNKLYVSNLAWKVRS+NLRDFFSE+FNPIAARVVFDSP+GRSAGYGFVSFAT
Sbjct: 181 PGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFAT 240
Query: 241 REEAQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 285
REEAQTALSSLEGKELMGRPLRLKFSER+VNE+ETPKEDIVESQPEES
Sbjct: 241 REEAQTALSSLEGKELMGRPLRLKFSERNVNEAETPKEDIVESQPEES 288
BLAST of IVF0010567 vs. NCBI nr
Match:
XP_038904114.1 (33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida])
HSP 1 Score: 485 bits (1248), Expect = 2.62e-171
Identity = 256/287 (89.20%), Postives = 269/287 (93.73%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
MATLESA+PIIS Y+SSSSS KL NKLPSAIKLRISFSSPL LNP T ISP+S + SR
Sbjct: 1 MATLESAIPIISQYISSSSS-KLRLNKLPSAIKLRISFSSPLRPLNPTTAISPLSLHLSR 60
Query: 61 NPGGGG--RLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVS 120
N GGGG RLCSAVQEVSLEEASE+ +DVNQKKKLYIFNLPWS SVVDIKELFGQCGTV+
Sbjct: 61 NHGGGGGSRLCSAVQEVSLEEASEQNEDVNQKKKLYIFNLPWSFSVVDIKELFGQCGTVT 120
Query: 121 DVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPP 180
DVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR K+PPPPKPP
Sbjct: 121 DVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKPP 180
Query: 181 GPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFATR 240
GPPP ETVNKLYVSNLAWKVRSSNLR+FFSE+FNP+AARVVFDSPSGRSAGYGFVSFATR
Sbjct: 181 GPPPVETVNKLYVSNLAWKVRSSNLREFFSENFNPVAARVVFDSPSGRSAGYGFVSFATR 240
Query: 241 EEAQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 285
EEA+TALSSLEGKELMGRPLRLKFSER+VNESETPKED VESQPEES
Sbjct: 241 EEAETALSSLEGKELMGRPLRLKFSERNVNESETPKEDNVESQPEES 286
BLAST of IVF0010567 vs. NCBI nr
Match:
KAG6577717.1 (hypothetical protein SDJN03_25291, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015754.1 hypothetical protein SDJN02_23392 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 481 bits (1237), Expect = 1.79e-169
Identity = 252/288 (87.50%), Postives = 268/288 (93.06%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISF---N 60
MATLESA+PIIS Y+SSSSS KL F+KLPSAIKLRISFSSPLLSLNP T +SP+ N
Sbjct: 1 MATLESAIPIISQYISSSSS-KLSFHKLPSAIKLRISFSSPLLSLNPTTAVSPLPLFLTN 60
Query: 61 SSRNPGGGGRLCSAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTV 120
SRN GGGGR CSAVQEVSLEEASEE QDVNQK+KLYIFNLPWS SVVDIKE FGQCGTV
Sbjct: 61 PSRNRGGGGRFCSAVQEVSLEEASEENQDVNQKRKLYIFNLPWSFSVVDIKEHFGQCGTV 120
Query: 121 SDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKP 180
+DVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR K+PPPPKP
Sbjct: 121 TDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRLKKPPPPKP 180
Query: 181 PGPPPGETVNKLYVSNLAWKVRSSNLRDFFSESFNPIAARVVFDSPSGRSAGYGFVSFAT 240
PGPPPGETV+KLYVSNLAWK RS+NLR+FFSE+FNPIAARVVFDSPSG+SAGYGFVSFAT
Sbjct: 181 PGPPPGETVHKLYVSNLAWKARSTNLREFFSENFNPIAARVVFDSPSGKSAGYGFVSFAT 240
Query: 241 REEAQTALSSLEGKELMGRPLRLKFSERSVNESETPKEDIVESQPEES 285
REEA+TALSSLEGKELMGRPLRLKFSER+V +SETPKED VESQPEES
Sbjct: 241 REEAETALSSLEGKELMGRPLRLKFSERTVVKSETPKEDTVESQPEES 287
BLAST of IVF0010567 vs. TAIR 10
Match:
AT2G35410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 285.8 bits (730), Expect = 3.8e-77
Identity = 163/287 (56.79%), Postives = 208/287 (72.47%), Query Frame = 0
Query: 1 MATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSR 60
MA LE++L I S SSSSS F+K S++KL LSL P+ +SP+ S R
Sbjct: 1 MAVLEASLSIFSFSSSSSSSKPYLFSKRSSSLKL------TALSLRIPSNLSPVF--SLR 60
Query: 61 NPGGGGR-----LC-------SAVQEVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIK 120
+ R LC SA +E S EE +EETQ+ N K+KL++FNLPWS+SV DI
Sbjct: 61 SGSDNSRRLVSVLCSVAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDIS 120
Query: 121 ELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR 180
ELFGQCGTV++VEII+QK+G++RGFAFVTMAS +EAQAAI KFD+ ++SGR+I V FA+R
Sbjct: 121 ELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARR 180
Query: 181 FKRPPPPKP---PGPPPGETVNKLYVSNLAWKVRSSNLRDFFSES-FNPIAARVVFDSPS 240
FK+P P P P P PG+T +KLYVSNLAWK RS++LR+ F+ + FNP++ARVVF P
Sbjct: 181 FKKPTPKSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPE 240
Query: 241 GRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSERSVNESE 272
GRS+GYGFVSFATREEA+ A++ L GKE+MGRP+ LKFS RS +ESE
Sbjct: 241 GRSSGYGFVSFATREEAENAITKLNGKEIMGRPITLKFSLRSASESE 279
BLAST of IVF0010567 vs. TAIR 10
Match:
AT4G09040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 141.0 bits (354), Expect = 1.5e-33
Identity = 80/215 (37.21%), Postives = 129/215 (60.00%), Query Frame = 0
Query: 76 SLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAF 135
S A E ++ K +L N+PW+ + DI+ LF + G+V D+E+ K R+RG F
Sbjct: 79 SSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVF 138
Query: 136 VTMASPDEAQAAIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGPPPGETVNKLYVSNLA 195
+ MASP+EA A++ +S E GR +KV++AK K+ P P T N L+V+NLA
Sbjct: 139 IEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFN-LFVANLA 198
Query: 196 WKVRSSNLRDFF-SESFNPIAARVVFDSPSGRSAGYGFVSFATREEAQTALSSLEGKELM 255
++ R+ +L++FF +++ N ++ V+F RS+GYGFVSF T+++A+ AL +GK+ +
Sbjct: 199 FEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFL 258
Query: 256 GRPLRL----KFSERSVNESETPKEDIVESQPEES 286
GRP+RL +F + E P E+ E +P +S
Sbjct: 259 GRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQS 292
BLAST of IVF0010567 vs. TAIR 10
Match:
AT4G09040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 138.7 bits (348), Expect = 7.5e-33
Identity = 77/201 (38.31%), Postives = 124/201 (61.69%), Query Frame = 0
Query: 90 KKKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKNGRSRGFAFVTMASPDEAQAAIQ 149
K +L N+PW+ + DI+ LF + G+V D+E+ K R+RG F+ MASP+EA A++
Sbjct: 33 KTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALK 92
Query: 150 KFDSQEISGRVIKVEFAKRFKRPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDFF-S 209
+S E GR +KV++AK K+ P P T N L+V+NLA++ R+ +L++FF +
Sbjct: 93 SLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFN-LFVANLAFEARAKHLKEFFDA 152
Query: 210 ESFNPIAARVVFDSPSGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL----KFSE 269
++ N ++ V+F RS+GYGFVSF T+++A+ AL +GK+ +GRP+RL +F +
Sbjct: 153 DTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFVK 212
Query: 270 RSVNESETPKEDIVESQPEES 286
E P E+ E +P +S
Sbjct: 213 LQAKEGLQPPEEEAEEEPSQS 232
BLAST of IVF0010567 vs. TAIR 10
Match:
AT3G52380.1 (chloroplast RNA-binding protein 33 )
HSP 1 Score: 134.8 bits (338), Expect = 1.1e-31
Identity = 93/314 (29.62%), Postives = 158/314 (50.32%), Query Frame = 0
Query: 2 ATLESALPIISPYVSSSSSSKLCFNKLPSAIKLRISFSSPLLSLNPPTPISPISFNSSRN 61
A S+ +P +SS S+S+L + P + KL + +PL+ + +
Sbjct: 15 AATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCAAETEA 74
Query: 62 PGGGGRLCSAVQ------------EVSLEEASEETQDVNQKKKLYIFNLPWSLSVVDIKE 121
+ ++V+ E +EE + TQ ++ +LY+ NLP++++ ++ +
Sbjct: 75 SSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQ 134
Query: 122 LFGQCGTVSDVEIIKQK-NGRSRGFAFVTMASPDEAQAAIQKFDSQEISGRVIKVEFAKR 181
+FG+ GTV DV+I+ K RSRGF FVTM S +EA+ A+Q F+S +I GR +KV F
Sbjct: 135 IFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNF--- 194
Query: 182 FKRPPPPKPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDFFSESF 241
P P GE + +K+Y NL W + S L+D F +
Sbjct: 195 --------PEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQP 254
Query: 242 NPIAARVVFDSPSGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSERSVNESE 286
+ A+V+++ +GRS G+GF+SF + E Q+AL+++ G E+ GR LRL + +
Sbjct: 255 GVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREKPTV 314
BLAST of IVF0010567 vs. TAIR 10
Match:
AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 126.3 bits (316), Expect = 3.9e-29
Identity = 90/238 (37.82%), Postives = 128/238 (53.78%), Query Frame = 0
Query: 37 SFSSPLLSLNPPTPISPISFNSSRNPGGGGRLCSAVQEVSLEEASEETQD---------V 96
S + LL N TP P+ SSR+ R+ S V LEE EE D
Sbjct: 26 SSNQTLLRFNFSTP-KPLLI-SSRSCSRRFRVLSETITVKLEE--EEKDDGASAVLDPPA 85
Query: 97 NQKKKLYIFNLPWSLSVVDIKELFGQCGTVSDVEIIKQKN-GRSRGFAFVTMASPDEAQA 156
KLY NLP+++ + ++ VE++ ++ G+SRGFAFVTM++ ++
Sbjct: 86 AVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNI 145
Query: 157 AIQKFDSQEISGRVIKVEFAKRFKRPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDF 216
I D E GR +KV FA +P P K P P ET +KL+V NL+W V S +L
Sbjct: 146 IIDNLDGTEYLGRALKVNFA---DKPKPNKEPLYP--ETEHKLFVGNLSWTVTSESLAGA 205
Query: 217 FSESFNPIAARVVFDSPSGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSE 265
F E + + ARVVFD +GRS GYGFV ++++ E +TAL SL+G EL GR +R+ ++
Sbjct: 206 FRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQ 254
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P19684 | 7.3e-33 | 36.91 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
Q39061 | 1.5e-30 | 29.62 | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP33 ... | [more] |
Q08935 | 1.7e-29 | 33.33 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 S... | [more] |
P19683 | 1.4e-28 | 35.75 | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=... | [more] |
P49313 | 1.2e-27 | 32.47 | 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia OX=4092 PE=... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3BK84 | 2.8e-152 | 100.00 | 28 kDa ribonucleoprotein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490770 ... | [more] |
A0A5A7UAR3 | 9.9e-150 | 99.30 | 28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A0A0L1U2 | 4.9e-141 | 92.01 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009490 PE=4 SV=1 | [more] |
A0A6J1E5Z7 | 2.7e-131 | 86.81 | 33 kDa ribonucleoprotein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114... | [more] |
A0A6J1KZ42 | 5.1e-130 | 85.71 | 29 kDa ribonucleoprotein A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC1115... | [more] |
Match Name | E-value | Identity | Description | |
XP_008448669.1 | 4.45e-197 | 100.00 | PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis melo] | [more] |
KAA0053033.1 | 9.33e-194 | 99.30 | 28 kDa ribonucleoprotein [Cucumis melo var. makuwa] >TYK11488.1 28 kDa ribonucle... | [more] |
XP_011650340.1 | 3.02e-182 | 92.01 | 29 kDa ribonucleoprotein A, chloroplastic [Cucumis sativus] >KGN55743.1 hypothet... | [more] |
XP_038904114.1 | 2.62e-171 | 89.20 | 33 kDa ribonucleoprotein, chloroplastic [Benincasa hispida] | [more] |
KAG6577717.1 | 1.79e-169 | 87.50 | hypothetical protein SDJN03_25291, partial [Cucurbita argyrosperma subsp. sorori... | [more] |