IVF0010562 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTAGGCAAGAGGACGAGGCCCTTCTCGTCACCAAAAACCCAATCATGTCAACCCTTGTCGGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAACGTCGTTGTGAACCTTTCAGACGATAACAACGATTTACCAGAAGACGCTTCCCCAGCCTCCGGTAATGATGTCGATGATCTTGACTATGACCCATACGAAGGCCTCGACATCAACGACCCATTTTTGGACACACAACCATATTAG ATGACTAGGCAAGAGGACGAGGCCCTTCTCGTCACCAAAAACCCAATCATGTCAACCCTTGTCGGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAACGTCGTTGTGAACCTTTCAGACGATAACAACGATTTACCAGAAGACGCTTCCCCAGCCTCCGGTAATGATGTCGATGATCTTGACTATGACCCATACGAAGGCCTCGACATCAACGACCCATTTTTGGACACACAACCATATTAG ATGACTAGGCAAGAGGACGAGGCCCTTCTCGTCACCAAAAACCCAATCATGTCAACCCTTGTCGGAGCAAGCACTCAACAGGAATTCAATTCTGTTGTCAATAACGTCGTTGTGAACCTTTCAGACGATAACAACGATTTACCAGAAGACGCTTCCCCAGCCTCCGGTAATGATGTCGATGATCTTGACTATGACCCATACGAAGGCCTCGACATCAACGACCCATTTTTGGACACACAACCATATTAG MTRQEDEALLVTKNPIMSTLVGASTQQEFNSVVNNVVVNLSDDNNDLPEDASPASGNDVDDLDYDPYEGLDINDPFLDTQPY Homology
BLAST of IVF0010562 vs. ExPASy TrEMBL
Match: A0A5D3BCD5 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold535G00150 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.2e-36 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of IVF0010562 vs. ExPASy TrEMBL
Match: A0A5D3DW87 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003410 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.1e-32 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of IVF0010562 vs. ExPASy TrEMBL
Match: A0A5A7T975 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002220 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 4.1e-32 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of IVF0010562 vs. ExPASy TrEMBL
Match: A0A5A7SR64 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold81G001720 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 7.0e-32 Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of IVF0010562 vs. ExPASy TrEMBL
Match: A0A5A7VIK9 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001410 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31 Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of IVF0010562 vs. NCBI nr
Match: KAA0058437.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYJ96699.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 162 bits (409), Expect = 1.25e-47 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of IVF0010562 vs. NCBI nr
Match: KAA0038025.1 (Enzymatic polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 147 bits (370), Expect = 3.02e-41 Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of IVF0010562 vs. NCBI nr
Match: KAA0066358.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (364), Expect = 4.17e-41 Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of IVF0010562 vs. NCBI nr
Match: KAA0054115.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYK29405.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 142 bits (359), Expect = 5.22e-41 Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 0
BLAST of IVF0010562 vs. NCBI nr
Match: TYK28077.1 (polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 149 bits (375), Expect = 5.31e-41 Identity = 75/82 (91.46%), Postives = 78/82 (95.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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