IVF0010051 (gene) Melon (IVF77) v1

Overview


Name	IVF0010051
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ribosome production factor 1-like
Location	chr04: 28144137 .. 28148411 (+)
RNA-Seq Expression	IVF0010051
Synteny	IVF0010051

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTTAACTTTCTGTTTCTCGCGCACGGCTGCGCTACCCTCTATTTTGCTCAAGCTCTGCCGCCACGCACGACCACCCCTCCGACGAACTTCGTCCGGCCGCCGCCGTCGTCTCCAGTCGCTCGTCGCCGGTTAGCGTTTGCCTCAGGCTTTACGCCGATTTTCTCTCTCTAGCATCTTTCGCCGCTGCTGTCTGCTGTTCGTCGCCGGTGCTACAGTTTCAGAGTCTTAGTTTTGGTAAGATTTGATATGTTTACGGGTTTTATTGAGAGTTTTGTTTTGGATACCCGCTACAATTTGGCTTCGTTATTGATTTAATTGTGATTTAGGAGGCTGGAATTGAAGTATTGAGACTGTCCAGTTGTGTTTAAGCTCGATTTTGGCAATTTGTTCTGGGTTGATACATTTTAAGCCCGAACCCTGTTTTCATATGTTAATAATCTGTCCAACCCGACTCCAAAATTTGAGAAAACTTTGTTATTTTTCTTCTCATAATTGTTTTCTCCTGTAGTTGCTTGCTTTCGTATTTGTTCTCTTTCACCAATTTTTCATTTATGTTAGAAGTTGATCAAGGAGTCTAAATGGGGGAGGAGAAGAAGAACAAGGGTATAATCCCATCTATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCGAACCTCAAGCACCAGAAGAAGCTTGAGAAACGCAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAAGTATATCCATCAACTCCAGCATCTACTCTGTTTGTCTTCTATCTCTGAGATTCTGACTTCATATCTTTTTTCCCGTAGCTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGGTTATTCTTTTAAAATCCAGTATATGACATTTTTTAGCTTTTGTTTATTTGTAATTCTTGTTATTTGGAGTTCACAATTTTAATAAGGCTAGTTTTTGATACTCTGCAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAACGCGACATTTTGCCTAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACGGTATGATTTCTTGTTATTACTAGTTATGCAGCAATTTATTTTTTGAGCAACATTGGCTAAATGGAGACTGACCTAAAACATTCGCAGTTGATTAGCCTTAGTATCTTATACTTAGATTTTCTGCTTGTATGTGACTTACTGTTTGCAGATTGGTCCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTATTACAAGAGAGGGACTAACGATTTGAAGAAGGTTATGCTCATATTTATATTTTCTAATGAACATGAAGAAGGAAAAGGAAATTAGAAAATAAAGAAGTTTATATTAATATTTATTGAATACCAATTCTTCTTGCTTGTAGATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACAAGTAGGAGAAAATTGGGTAAGTTGATAGCCCTTCATAAACCTTGCAGTTCATTCGTCTCTTTCAAACTTGTTCTCTCTTTTTCTAGTTTTTTTTTCTTTAGCTATATAGATTAGATTCTTTTCTCAATCTAATGCAATGTTTCGAAATTTTAGATGGACTTTTAATTATTGGATTACCTGAGGGACCTACTGCCCATTTCAAGATTTCAAATGTTGTCTTACGTAAGGACATTAAGGTATGCTGGTTCAAGTCAATAAAAAACCTCTGAACTGATGTATTGAATTTTAGCTACTACTGGCTTTTTGGAGGATTTGTTCTCCCAAGAACCCATAACCATTTAATCTTTTCTTGATTTGTAGAATCATGGAAATCCAACGGGTCATCAGCCAGAACTTGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGGTTATTTTCTGTACCTTAATTTCTTTATATGCAAATACCGCCTCTTGTGATGTCCGCATTTAATTTTTAGGCGTTCTTGTTTCTTTTTTATGTTTCTGTAATTATGATATCTCAAGCTTTTTTTTTCAATGCATTGACTTTTGTTGTTTTGTTGTTTCTTTAGATTAATACAATCACTATTCCCTCAAGATCCCAATTTTCGCGGTCGCCGGGTTGTAACTTTTCATAACCAACGAGATTTTATATTTTTTCGGCATCACCGGTATGCTGCCACATATATATATATACACATTTCTCTGTATTTAGGTGAGTTGGACTATGATTAATTCATGTTTTTACCTTCTCAGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCTGACTCAAAAAAGAAGTCCAAGGATACCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTGATTGCTCGTCTTCAGGTCGATATTAACCTACTACTCAAACAACGTTTTATGATTTCTATAGTGGTTTATTTTGCAACTTGGAGACTTCAATACCGTTTACTTGTTTTCATCTTGTCTCTCTTTCTACAACTCAGTTTATTTTCTTCCTCTAATTTTTTTGGGGGTGATGATTAACATCAATTCATTTATAATCAAGGAACCACGACAGAGGAACTCTGGAAATTTAGAAACGTTGAGTGGGTTTTGTGAGAAATAGTCTATGGAAGCCAAAAATTTCTTAGTGTAGCATACTCCTTTGGTTTTATACTGTCACTAATCCCACACATCAAAATTATTATTTTTTATCAGCTTTTGTTTCTTCAATCAATCTGGAAACTGACCAACGAGTGTGTGGGGTTAAAATTGACTTGTGTCAGAACACACCAAATTTTTGATTATGTTATCCTCGGAGATAATGTACTGCCATTTTTTTCCAGATTGTTAAGTCTTGTATCCCTTTGAATTTAGTCTTCCTTCTCCTTCGACAAAATAAAGAAGTTGCAGCTCATCCAAGAGGGTTAGCAAGGACCACGTCATCACTTAGTGTCCAGAACTTCCATGTTATTCTTTGTGCCAATTTTTGTTTCTTTTGCGATTAGATTTGAATGAAAGTGATATTAGTAGACTCTAAAATATGAGAAATAATTGGAGAAAACAAGGCTAAATAATGATGGGGGAGGAATGTTAGTGTAGACAACTGATTCTGAGATTTGATTTTTAGGAATGTGGTCCTCGGTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCGAAAGGCGGGGAATATGAATGGGTTCATAAGGTAAGTCGAGTCTATCTATCTCTATCAGATATGCATGGAATGGACACTAATAGATCATTATCTATACTGTTTATCTAATGTGTTTTTTGTTTACTTTCTTTGAATTCTAGCCTGAAATGGATACAAGCCGCAGAAGATTTTTCTTGTGACATTCTTTGGTAGTTCATTACTCTGGTCGTGGGGAGTTAAAATTGTTCAGCTCTAATTTATATAATATTTTGGTATGTAGACCTCCTTGCTCTTTTATTTATTATATGTAAAACACAATGATCTCTTTGATAAGAAGGAAATGAAGTATTGTTAGGAAGAAGGAATATATTAAAATATAAAATCAACGACTACAAAAAAGTCCAAGGCACTTGAAACTTCCTGCTTGAGTATGCACCCAAACCCTAGATCGTCACCATACAAAAATTGCCTACTTTCACACACTCACCCATCTTCTATTGATAACAAGATCCCCATAACTAACATCCTATACATTCGCCCTTGTAAAACTTACTGGCTTACACTACCAATATTCTTATTTAGGTACCTTACATCTCCTACCATCCAAGGGGATTAAATAAAGGTTAGACTTTGTTTCGTGAGTTTAGTCGTGTTAAAGTGTATGAATGTGAAATAAACCCAAACACTCGTAGAAGAAAAAAATAAATGTGAAAAAACCGATAATATTTGTTAGGGTTCAACTGATGGCCTCGTGATTGTGCAGGGTGGAATGGTGGAGTGCCGATCAATTTCAAATCTCCATTTCAGCCTTCATGTATGTTAGAAGTTGATTTCTTTTTGCACTATTCAAAATTTTGTAGCATTTGCTGAGTTTGTTCCATAGGTATCAATCAATCTAGTAGCTGGCAATTCAAAAGAGAAAGCCATAATATTTATTTCTCTTATTTAGGGGGGTGCAAGGGTTGATTCATTAACTTAGAGAATGCAAATTTGGGATGCTAAACTTGAAAGATTCGAGTTGAAATATTTTACAAGTTTATAAACTTATTAAAAAAAACTCAACTCAATTAAAAGTCCTAACATA

mRNA sequence

CTCTCTCTTAACTTTCTGTTTCTCGCGCACGGCTGCGCTACCCTCTATTTTGCTCAAGCTCTGCCGCCACGCACGACCACCCCTCCGACGAACTTCGTCCGGCCGCCGCCGTCGTCTCCAGTCGCTCGTCGCCGGTTAGCGTTTGCCTCAGGCTTTACGCCGATTTTCTCTCTCTAGCATCTTTCGCCGCTGCTGTCTGCTGTTCGTCGCCGGTGCTACAGTTTCAGAGTCTTAGTTTTGAAGTTGATCAAGGAGTCTAAATGGGGGAGGAGAAGAAGAACAAGGGTATAATCCCATCTATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCGAACCTCAAGCACCAGAAGAAGCTTGAGAAACGCAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAACGCGACATTTTGCCTAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACGATTGGTCCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTATTACAAGAGAGGGACTAACGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACAAGTAGGAGAAAATTGGATGGACTTTTAATTATTGGATTACCTGAGGGACCTACTGCCCATTTCAAGATTTCAAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACGGGTCATCAGCCAGAACTTGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGATTAATACAATCACTATTCCCTCAAGATCCCAATTTTCGCGGTCGCCGGGTTGTAACTTTTCATAACCAACGAGATTTTATATTTTTTCGGCATCACCGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCTGACTCAAAAAAGAAGTCCAAGGATACCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTGATTGCTCGTCTTCAGGAATGTGGTCCTCGGTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCGAAAGGCGGGGAATATGAATGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTTTTCTTGTGACATTCTTTGGTAGTTCATTACTCTGGTCGTGGGGAGTTAAAATTGTTCAGCTCTAATTTATATAATATTTTGGTACCTTACATCTCCTACCATCCAAGGGGATTAAATAAAGGGTGGAATGGTGGAGTGCCGATCAATTTCAAATCTCCATTTCAGCCTTCATGTATGTTAGAAGTTGATTTCTTTTTGCACTATTCAAAATTTTGTAGCATTTGCTGAGTTTGTTCCATAGGTATCAATCAATCTAGTAGCTGGCAATTCAAAAGAGAAAGCCATAATATTTATTTCTCTTATTTAGGGGGGTGCAAGGGTTGATTCATTAACTTAGAGAATGCAAATTTGGGATGCTAAACTTGAAAGATTCGAGTTGAAATATTTTACAAGTTTATAAACTTATTAAAAAAAACTCAACTCAATTAAAAGTCCTAACATA

Coding sequence (CDS)

ATGGGGGAGGAGAAGAAGAACAAGGGTATAATCCCATCTATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCGAACCTCAAGCACCAGAAGAAGCTTGAGAAACGCAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATGAGACTGTTTGCAAACCTGATGATGAAGAGCTATTTGCTGGAAATGATGCTGATGAATTTAGTTCCATCATAAAACGCGACATTTTGCCTAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACGATTGGTCCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTATTACAAGAGAGGGACTAACGATTTGAAGAAGATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACAAGTAGGAGAAAATTGGATGGACTTTTAATTATTGGATTACCTGAGGGACCTACTGCCCATTTCAAGATTTCAAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACGGGTCATCAGCCAGAACTTGTATTGACCAACTTCACAACACGCCTTGGTCTTCGTGTTGGAAGATTAATACAATCACTATTCCCTCAAGATCCCAATTTTCGCGGTCGCCGGGTTGTAACTTTTCATAACCAACGAGATTTTATATTTTTTCGGCATCACCGATACATTTTTGAAAGCAAGGAAAATAAAAAAGAGGCTGACTCAAAAAAGAAGTCCAAGGATACCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTGATTGCTCGTCTTCAGGAATGTGGTCCTCGGTTCACAATGAAATTGATCAGTTTGCAGCATGGAACTTTCGATTCGAAAGGCGGGGAATATGAATGGGTTCATAAGCCTGAAATGGATACAAGCCGCAGAAGATTTTTCTTGTGA

Protein sequence

MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL

Homology

[Close]

BLAST of IVF0010051 vs. ExPASy Swiss-Prot
Match: Q8AVP1 (Ribosome production factor 1 OS=Xenopus laevis OX=8355 GN=rpf1 PE=2 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-72
Identity = 155/326 (47.55%), Postives = 204/326 (62.58%), Query Frame = 0


Query: 13  SMIKNKEKRAEVHANLKHQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIEN 72
           S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN
Sbjct: 49  SEIKNKQRRQFMFIKLKQEKRKEKLILRKKRKKEREA-------LGDKAPPKPVPKTIEN 108

Query: 73  TREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVI 132
            R  DET   P DEE+      DEF+    +   PK+LITT          F  +L S+I
Sbjct: 109 QRVYDETTVDPADEEVALDEATDEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSII 168

Query: 133 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVV 192
           PN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV 
Sbjct: 169 PNSDVYYRRGLALKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAHFKISNVR 228

Query: 193 LRKDIKNHG-NPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF 252
           LRK++K  G  PT H+PE++L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD+
Sbjct: 229 LRKEMKRKGKEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVATFHNQRDY 288

Query: 253 IFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT 312
           IFFR+HRY+F+S++                           +QE GPRFT+KL SLQ GT
Sbjct: 289 IFFRYHRYLFKSEKK------------------------VGIQELGPRFTLKLRSLQKGT 343

Query: 313 FDSKGGEYEWVHK-PEMDTSRRRFFL 333
           FDSK GEYEWVHK  EMDTSRR+F L
Sbjct: 349 FDSKYGEYEWVHKRHEMDTSRRKFHL 343

[Close]

BLAST of IVF0010051 vs. ExPASy Swiss-Prot
Match: Q5R631 (Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.5e-72
Identity = 154/326 (47.24%), Postives = 202/326 (61.96%), Query Frame = 0


Query: 9   GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIEN 68
           G   S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N
Sbjct: 51  GFSISEIKNKERR---HLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDN 110

Query: 69  TREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVI 128
            R  DET   P+DEE+      DEF+S   +   PK+LITT             +L +VI
Sbjct: 111 QRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVI 170

Query: 129 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVV 188
           PN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V 
Sbjct: 171 PNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVR 230

Query: 189 LRKDIKNHG-NPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF 248
           LRK+IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD+
Sbjct: 231 LRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDY 290

Query: 249 IFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT 308
           IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Sbjct: 291 IFFRFHRYIFRSEKK------------------------VGIQELGPRFTLKLRSLQKGT 349

Query: 309 FDSKGGEYEWVHKP-EMDTSRRRFFL 333
           FDSK GEYEWVHKP EMDTSRR+F L
Sbjct: 351 FDSKYGEYEWVHKPREMDTSRRKFHL 349

[Close]

BLAST of IVF0010051 vs. ExPASy Swiss-Prot
Match: Q9H9Y2 (Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 5.5e-72
Identity = 153/326 (46.93%), Postives = 202/326 (61.96%), Query Frame = 0


Query: 9   GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIEN 68
           G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N
Sbjct: 51  GFSISEIKNKQRR---HLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDN 110

Query: 69  TREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVI 128
            R  DET   P+DEE+      DEF+S   +   PK+LITT             +L +VI
Sbjct: 111 QRVYDETTVDPNDEEVAYDEATDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVI 170

Query: 129 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVV 188
           PN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V 
Sbjct: 171 PNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVR 230

Query: 189 LRKDIKNHG-NPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF 248
           LRK+IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD+
Sbjct: 231 LRKEIKRRGKDPTEHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDY 290

Query: 249 IFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT 308
           IFFR HRYIF S++                           +QE GPRFT+KL SLQ GT
Sbjct: 291 IFFRFHRYIFRSEKK------------------------VGIQELGPRFTLKLRSLQKGT 349

Query: 309 FDSKGGEYEWVHKP-EMDTSRRRFFL 333
           FDSK GEYEWVHKP EMDTSRR+F L
Sbjct: 351 FDSKYGEYEWVHKPREMDTSRRKFHL 349

[Close]

BLAST of IVF0010051 vs. ExPASy Swiss-Prot
Match: Q7TND5 (Ribosome production factor 1 OS=Mus musculus OX=10090 GN=Rpf1 PE=2 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 5.5e-72
Identity = 153/326 (46.93%), Postives = 203/326 (62.27%), Query Frame = 0


Query: 9   GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIEN 68
           G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N
Sbjct: 51  GFSISEIKNKQRR---HLMFTRWKQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDN 110

Query: 69  TREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVI 128
            R  DET   P+DEE+      DEF+S   R   PK+LITT             +L +VI
Sbjct: 111 QRVYDETTVDPNDEEVAYDEATDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVI 170

Query: 129 PNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVV 188
           P++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V 
Sbjct: 171 PDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVR 230

Query: 189 LRKDIKNHG-NPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF 248
           LRK+IK  G +PT H PE++L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD+
Sbjct: 231 LRKEIKRRGKDPTEHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDY 290

Query: 249 IFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT 308
           IFFR HRYIF+S++                           +QE GPRFT+KL SLQ GT
Sbjct: 291 IFFRFHRYIFKSEKK------------------------VGIQELGPRFTLKLRSLQKGT 349

Query: 309 FDSKGGEYEWVHKP-EMDTSRRRFFL 333
           FDSK GEYEWVHKP EMDTSRR+F L
Sbjct: 351 FDSKYGEYEWVHKPREMDTSRRKFHL 349

[Close]

BLAST of IVF0010051 vs. ExPASy Swiss-Prot
Match: Q6IQU6 (Ribosome production factor 1 OS=Danio rerio OX=7955 GN=rpf1 PE=2 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.6e-71
Identity = 157/322 (48.76%), Postives = 204/322 (63.35%), Query Frame = 0


Query: 13  SMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREV 72
           S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  
Sbjct: 36  SEIKNKQRRHTMFLKLKEEKR-KKRMELKKKKKKERKALD--DKAPPKEVPKTIENQRIY 95

Query: 73  DETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAH 132
           DET   P+DEE+      DEFS+   R   PKVLITT          F  +L +VIP+A+
Sbjct: 96  DETTVNPEDEEVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAY 155

Query: 133 YYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKD 192
            Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK+
Sbjct: 156 VYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKE 215

Query: 193 IKNHG-NPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFR 252
           +K  G NPT H PE++L NFTTRLG  +GRL  +LFP DP F GR+V TFHNQRDFIFFR
Sbjct: 216 MKRRGKNPTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFR 275

Query: 253 HHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK 312
            HRYIF  K  KK                        +QE GPRFT+KL SLQ GTFDSK
Sbjct: 276 FHRYIF--KNEKK----------------------VGIQELGPRFTLKLRSLQKGTFDSK 330

Query: 313 GGEYEWVHK-PEMDTSRRRFFL 333
            GEYEWVHK  EMD+SRR+F L
Sbjct: 336 FGEYEWVHKRHEMDSSRRKFHL 330

[Close]

BLAST of IVF0010051 vs. ExPASy TrEMBL
Match: A0A1S3B854 (ribosome production factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486828 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 3.8e-185
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60
           MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240
           HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT
Sbjct: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of IVF0010051 vs. ExPASy TrEMBL
Match: A0A5A7UHC7 (Ribosome production factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006030 PE=4 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 3.8e-185
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60
           MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240
           HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT
Sbjct: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of IVF0010051 vs. ExPASy TrEMBL
Match: A0A0A0LH42 (Brix domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G814330 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 8.8e-182
Identity = 325/332 (97.89%), Postives = 329/332 (99.10%), Query Frame = 0


Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60
           MGEEKKNK I+PS IKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPK+LITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240
           HFKISNVVLRK+IKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT
Sbjct: 181 HFKISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKEADSKKKSK TKGEKVPQQKVIARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of IVF0010051 vs. ExPASy TrEMBL
Match: A0A6J1DPH5 (ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111023106 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 3.0e-174
Identity = 316/333 (94.89%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNSTIGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSTIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]

BLAST of IVF0010051 vs. ExPASy TrEMBL
Match: A0A6J1DT48 (ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111022909 PE=4 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 3.9e-174
Identity = 315/333 (94.59%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]

BLAST of IVF0010051 vs. NCBI nr
Match: XP_008443155.1 (PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_008443156.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_016899701.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >KAA0053947.1 ribosome production factor 1 isoform X1 [Cucumis melo var. makuwa] >TYK25457.1 ribosome production factor 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 653 bits (1684), Expect = 3.40e-236
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0


Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60
           MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240
           HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT
Sbjct: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of IVF0010051 vs. NCBI nr
Match: XP_031737500.1 (ribosome production factor 1 [Cucumis sativus] >KGN59366.1 hypothetical protein Csa_002461 [Cucumis sativus])

HSP 1 Score: 642 bits (1655), Expect = 8.97e-232
Identity = 325/332 (97.89%), Postives = 329/332 (99.10%), Query Frame = 0


Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60
           MGEEKKNK I+PS IKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEEKKNKVIVPSTIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPK+LITTCRFNSTIGPAF
Sbjct: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKILITTCRFNSTIGPAF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIVEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240
           HFKISNVVLRK+IKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT
Sbjct: 181 HFKISNVVLRKEIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKEADSKKKSK TKGEKVPQQKVIARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKGTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of IVF0010051 vs. NCBI nr
Match: XP_038906205.1 (ribosome production factor 1 [Benincasa hispida])

HSP 1 Score: 639 bits (1648), Expect = 1.05e-230
Identity = 323/332 (97.29%), Postives = 329/332 (99.10%), Query Frame = 0


Query: 1   MGEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPR 60
           MGEE KN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPR
Sbjct: 1   MGEENKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPR 60

Query: 61  KIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAF 120
           KIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR+ILPKVLITTCRFNSTIGP F
Sbjct: 61  KIPRTIENTREVDETLCKPDDEELFAGNDADEFSSIIKREILPKVLITTCRFNSTIGPTF 120

Query: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180
           ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA
Sbjct: 121 ISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTA 180

Query: 181 HFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVT 240
           HFKISNVVLRKDIKNHGNPT HQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVT
Sbjct: 181 HFKISNVVLRKDIKNHGNPTSHQPELVLTNFTTRLGLRIGRLIQALFPQDPNFRGRRVVT 240

Query: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300
           FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Sbjct: 241 FHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL 300

Query: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332
           ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 ISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332

[Close]

BLAST of IVF0010051 vs. NCBI nr
Match: XP_022156150.1 (ribosome production factor 1-like [Momordica charantia] >XP_022156151.1 ribosome production factor 1-like [Momordica charantia])

HSP 1 Score: 617 bits (1590), Expect = 7.51e-222
Identity = 316/333 (94.89%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNSTIGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSTIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDFIFFRHHRYIF+SKENKKEADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFIFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPKQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]

BLAST of IVF0010051 vs. NCBI nr
Match: XP_022155906.1 (ribosome production factor 1-like [Momordica charantia])

HSP 1 Score: 616 bits (1589), Expect = 1.07e-221
Identity = 315/333 (94.59%), Postives = 321/333 (96.40%), Query Frame = 0


Query: 1   MGEEKKNK-GIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPP 60
           MGEEKKNK  IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PP
Sbjct: 1   MGEEKKNKRDIIPSMIKNKEKRKEVHANLKQQKKLEKRKRAKARDASEKQALELGEEPPP 60

Query: 61  RKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPA 120
           R IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR  LPKVLITTCRFNS+IGP+
Sbjct: 61  RMIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRHTLPKVLITTCRFNSSIGPS 120

Query: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180
           FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT
Sbjct: 121 FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPT 180

Query: 181 AHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240
           AHFKISNVVLRKDIKNHGNPT H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV
Sbjct: 181 AHFKISNVVLRKDIKNHGNPTSHEPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVV 240

Query: 241 TFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK 300
           TFHNQRDF+FFRHHRYIF+SKENKKEADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Sbjct: 241 TFHNQRDFVFFRHHRYIFDSKENKKEADSKSNSKDAKGEKVPQQKVIARLQECGPRFTMK 300

Query: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 332
           LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL
Sbjct: 301 LISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333

[Close]

BLAST of IVF0010051 vs. TAIR 10
Match: AT4G01560.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 491.9 bits (1265), Expect = 4.1e-139
Identity = 245/331 (74.02%), Postives = 283/331 (85.50%), Query Frame = 0


Query: 2   GEEKKNKGIIPSMIKNKEKRAEVHANLKHQKKLEKRKRAKARDAAEKQALELGEELPPRK 61
           G EK+N  I+PSMIKNK+KR++V+A  KH+KKLEK+K+ +ARDAAEK+ALELGEE P + 
Sbjct: 27  GGEKRNV-ILPSMIKNKDKRSKVYAKQKHEKKLEKQKKIRARDAAEKRALELGEEPPQKM 86

Query: 62  IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFI 121
           IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R+I PKVL+TTCRFNST GPA I
Sbjct: 87  IPKTIENTRESDETVCRPDDEELFADIDADEFNPVLRREIAPKVLLTTCRFNSTRGPALI 146

Query: 122 SELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAH 181
           SELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAH
Sbjct: 147 SELLSVIPNSHYQKRGTYDLKKIVEYATKKDFTSLIVVHTNRREPDALLIIGLPNGPTAH 206

Query: 182 FKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTF 241
           FK+SN+VLRKDIKNHGNPT HQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVTF
Sbjct: 207 FKLSNLVLRKDIKNHGNPTSHQPELVLNNFTTRLGNRVGRFFQSLFPPDPNFRGRRVVTF 266

Query: 242 HNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLI 301
           HNQRDFIFFRHHRYIFE+KE             +K +K  ++ +  RLQECGPRFT+KL+
Sbjct: 267 HNQRDFIFFRHHRYIFETKE-------------SKSDKGKEETIKPRLQECGPRFTLKLV 326

Query: 302 SLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
           +LQHGTFD+KGGE+EWVHKPEMDTSRRRFFL
Sbjct: 327 TLQHGTFDTKGGEFEWVHKPEMDTSRRRFFL 343

[Close]

BLAST of IVF0010051 vs. TAIR 10
Match: AT1G63780.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.8e-38
Identity = 101/288 (35.07%), Postives = 154/288 (53.47%), Query Frame = 0


Query: 48  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLI 107
           ++AL+ G+ +P        +  +E+D    +  +  +   +  DE+++  + D  PK+L+
Sbjct: 33  REALQEGKPIPTELRNVEAKLRQEID---LEDQNTAVPRSHIDDEYANATEAD--PKILL 92

Query: 108 TTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLD 167
           TT R  S     F  EL  V PN+    RG+  + +IIE A + DFT +++VH  R   D
Sbjct: 93  TTSRNPSAPLIRFTKELKFVFPNSQRINRGSQVISEIIETARSHDFTDVILVHEHRGVPD 152

Query: 168 GLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTGHQPELVLTNFTTRLGLRVGRLIQ 227
           GL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RVG +++
Sbjct: 153 GLIISHLPFGPTAYFGLLNVVTRHDISDKKSIGKMPEQYPHLIFNNFTTQMGQRVGNILK 212

Query: 228 SLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKEADSKKKSKDTKGEKVPQQK 287
            +FP  P    +R+VTF NQ D+I FR+H Y                    KGE  P+  
Sbjct: 213 HIFPA-PKLDAKRIVTFSNQSDYISFRNHVY-------------------DKGEGGPKS- 272

Query: 288 VIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 333
               L+E GPRF ++L  ++ GT +    E EWV +P M+TS++R F+
Sbjct: 273 --IELKEIGPRFELRLYQVKLGTVEQNEAEIEWVIRPYMNTSKKRKFI 292

The following BLAST results are available for this feature:

BLAST of IVF0010051 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8AVP1	1.1e-72	47.55	Ribosome production factor 1 OS=Xenopus laevis OX=8355 GN=rpf1 PE=2 SV=1	[more]
Q5R631	2.5e-72	47.24	Ribosome production factor 1 OS=Pongo abelii OX=9601 GN=RPF1 PE=2 SV=1	[more]
Q9H9Y2	5.5e-72	46.93	Ribosome production factor 1 OS=Homo sapiens OX=9606 GN=RPF1 PE=1 SV=2	[more]
Q7TND5	5.5e-72	46.93	Ribosome production factor 1 OS=Mus musculus OX=10090 GN=Rpf1 PE=2 SV=2	[more]
Q6IQU6	4.6e-71	48.76	Ribosome production factor 1 OS=Danio rerio OX=7955 GN=rpf1 PE=2 SV=1	[more]

BLAST of IVF0010051 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B854	3.8e-185	100.00	ribosome production factor 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486828 ...	[more]
A0A5A7UHC7	3.8e-185	100.00	Ribosome production factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0LH42	8.8e-182	97.89	Brix domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G814330 PE=4 S...	[more]
A0A6J1DPH5	3.0e-174	94.89	ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111023106...	[more]
A0A6J1DT48	3.9e-174	94.59	ribosome production factor 1-like OS=Momordica charantia OX=3673 GN=LOC111022909...	[more]

BLAST of IVF0010051 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443155.1	3.40e-236	100.00	PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo] >XP_008443156....	[more]
XP_031737500.1	8.97e-232	97.89	ribosome production factor 1 [Cucumis sativus] >KGN59366.1 hypothetical protein ...	[more]
XP_038906205.1	1.05e-230	97.29	ribosome production factor 1 [Benincasa hispida]	[more]
XP_022156150.1	7.51e-222	94.89	ribosome production factor 1-like [Momordica charantia] >XP_022156151.1 ribosome...	[more]
XP_022155906.1	1.07e-221	94.59	ribosome production factor 1-like [Momordica charantia]	[more]

BLAST of IVF0010051 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01560.1	4.1e-139	74.02	Ribosomal RNA processing Brix domain protein	[more]
AT1G63780.1	1.8e-38	35.07	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 106..303 e-value: 1.2E-57 score: 207.5
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 119..301 e-value: 1.7E-33 score: 116.4
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 103..309 score: 41.374249
None	No IPR available	GENE3D	3.40.50.10480		coord: 103..299 e-value: 1.1E-36 score: 128.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..57
None	No IPR available	PANTHER	PTHR22734:SF3	RIBOSOME PRODUCTION FACTOR 1	coord: 1..332
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 103..306
IPR044281	U3 snoRNP protein/Ribosome production factor 1	PANTHER	PTHR22734	U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4	coord: 1..332

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0010051.6	IVF0010051.6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0042134	rRNA primary transcript binding
molecular_function	GO:0019843	rRNA binding