
IVF0009425 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATACATGAGGCATTGGAGTATGCGAATGACCAGCTGAGGGCCATTGTCGAGTTGCCTTTGCGGACACTTCAGGATGAGACCACAATTCGCAAGGAAGTCCTTCGTCAATTGAATGCGATGCCCGATCTAAGTAGGTTGGATAGGGCACACTGCTCGGAGAGCCTCTTTCGTAGTTTGGACGACATGCATGGCTTCATTGAGATAATGGAAGAGGAGAGGATGGACTACTGCACAGTCCTCCTACGAGAAGACCCATGA ATGATACATGAGGCATTGGAGTATGCGAATGACCAGCTGAGGGCCATTGTCGAGTTGCCTTTGCGGACACTTCAGGATGAGACCACAATTCGCAAGGAAGTCCTTCGTCAATTGAATGCGATGCCCGATCTAAGTAGGTTGGATAGGGCACACTGCTCGGAGAGCCTCTTTCGTAGTTTGGACGACATGCATGGCTTCATTGAGATAATGGAAGAGGAGAGGATGGACTACTGCACAGTCCTCCTACGAGAAGACCCATGA ATGATACATGAGGCATTGGAGTATGCGAATGACCAGCTGAGGGCCATTGTCGAGTTGCCTTTGCGGACACTTCAGGATGAGACCACAATTCGCAAGGAAGTCCTTCGTCAATTGAATGCGATGCCCGATCTAAGTAGGTTGGATAGGGCACACTGCTCGGAGAGCCTCTTTCGTAGTTTGGACGACATGCATGGCTTCATTGAGATAATGGAAGAGGAGAGGATGGACTACTGCACAGTCCTCCTACGAGAAGACCCATGA MIHEALEYANDQLRAIVELPLRTLQDETTIRKEVLRQLNAMPDLSRLDRAHCSESLFRSLDDMHGFIEIMEEERMDYCTVLLREDP Homology
BLAST of IVF0009425 vs. ExPASy TrEMBL
Match: A0A5D3BFC4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold234G00670 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 2.7e-34 Identity = 76/86 (88.37%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of IVF0009425 vs. ExPASy TrEMBL
Match: A0A5A7URM1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold697G00200 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.6e-21 Identity = 54/85 (63.53%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of IVF0009425 vs. ExPASy TrEMBL
Match: A0A5D3CSY3 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00140 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.4e-21 Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of IVF0009425 vs. ExPASy TrEMBL
Match: A0A5A7V3G0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00270 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.7e-21 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of IVF0009425 vs. ExPASy TrEMBL
Match: A0A5A7UUF7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001110 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 8.2e-15 Identity = 43/85 (50.59%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of IVF0009425 vs. NCBI nr
Match: KAA0051644.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ97963.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 155 bits (392), Expect = 4.20e-46 Identity = 76/86 (88.37%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of IVF0009425 vs. NCBI nr
Match: KAA0060299.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK22049.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 110 bits (275), Expect = 8.64e-29 Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0
BLAST of IVF0009425 vs. NCBI nr
Match: KAA0056139.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (279), Expect = 2.28e-28 Identity = 54/85 (63.53%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of IVF0009425 vs. NCBI nr
Match: TYK14144.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 111 bits (278), Expect = 2.72e-28 Identity = 55/85 (64.71%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of IVF0009425 vs. NCBI nr
Match: KAA0051652.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYJ97958.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 88.6 bits (218), Expect = 1.51e-20 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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