IVF0008708 (gene) Melon (IVF77) v1

Overview
NameIVF0008708
Typegene
OrganismCucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein DELETION OF SUV3 SUPPRESSOR 1(I)-like
Locationchr03: 21204325 .. 21208241 (+)
RNA-Seq ExpressionIVF0008708
SyntenyIVF0008708
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAGATCTAATTGTCATGAAATTGAATTCCTAAAGTAATAATGATTTAGAAAGCATCGGCTTGCCGACTTGTCTCTCAAGATATCTCGACTCATTTTTCCAATAGAAAATCAATCAATACCAGACTCCCTCGATCTTTCCTGCTCCACGGCTCTCTCATCACAACTCTCTCCCAAGGTTCTTAGCTTCTTTCTCTCTCCATTTTTATCTGCTTTCAATTTTAATGTTACATTTCTCACTCTGGACTATACTTTACTGTTTGTCTTTTGAATTATGATTTAGTTGATTCCTTGCTTTATAATTCCTGCTGTGATTCTCCTCAGAATTAGGAGGGAAGAGAACGAACATATGTATTTTCTTATTTTTCCTTTTGCCTCCACTCCTCTCTTCTGGGTCTGCTTTCTTCTCTGTTTTTGTCTAGAATCTGCAACCAGAAATGTAGAATGGGGCCAGCTCAGTGTGGCTGCGTGATAAGAACTGTTTACTTTCTGTGCTTTCAAATATGCATTTGTAGAACAGAAAAGTTTCAGAACTCGAGACTGTATATTTGATATTCGAAGGCTACCGTTTTCAAAGATATATTTTTCCTTTTCGAGTTGGCTCCCTATGCTTCAAATTTTAGTACTATAAAAAAATGCAAAAATCCCATTTAGTTCTTTGAATTATCTTAGTACAACTTTTAAGTGTAACTATGGATGATGGAAAAGGGGCCTAGCCTGTGAATTGGGATGTGGTTTTGAAGTCTGTGAACATGAGCTTGATCTTGAGAATTTAAGGACTCAGTTACTAAAACCTGTTGGTGAAATGGATTTAACATTTCCTTCTTGAGTCTTAAACCAGTGGTGAAGGATTATCGCGAGTAAGTACGGTGTCACCCCTTTGAGTGGAAGGATATCTCTTTTGACCTTCCTTCTTTCTCTCATTTAGTCTATTGTGTTGTGGGGAAGGGGATGAAATCGTGCTTTTGGGGTAGGATCAGTGGTAGGAGATAGACCCCTCATCTTTACCATTTATCCTCTTTGAAAAACTGTTTCGTGGATGAGGTTTTAGTTTTGTCTGGGACTTTGGGAGCTCCTCTCTTTGTCGTGCGGCTTTCATTGTTCTTTAGAGAAAGGATGGTCAGCCCTTCTGTCTCTGATAAAGGAGTTTGATTAGGATCAGTAGAAGGGATGTGCGTATTTGATGCTCTAACCCTTCTGGAGGTCTCTCTTGTAGTTTTTCTTTTTTTCAATTGTTTGATGGACCCTTCACCCAATATGGATTTTTTTTCTTAGCTCTCTTGAATATTAAGATTCCAAAGAAGGTTAAGTTCTTTGTCTATCAGGTCATCCATAGGCAATGTAACACTCTTGATTAAGTCTTGAGAAAGCAACCTACATTAATTGGCCCATTTTTTTAACCCTCCTTTGGAAGGCAAAGGAAGACCTGGATCATATTTTTTGAAGATTGTATGAACGATTTTTGGAGGCATTTGGCTTTTCATTAGCCCACTCTAGAGACCTGAACATTTCTCATGGTTCCTTCTCCATTTGCGTTTTAAGAAGGGTTGTTTCTTATGGCTTGCCGGAGTGTGCTATATTGTAGGATTTTTGAGGAGAGAGGAATAATTGAGTGTTTAGAGGATTGGAAAGAGATCCAAGTATGTTTGGTCCTTTCTTTGTTTCCATGTTTCTCTTTGGACTTCGGTGGTTTTTTGCAACTACCGAATAGGTATTATTTAATAGAACGAGAAAACCCTTCCTTTCTTGGCCTCCCTTTTCATGGTTTTTTCCTCTTTCTGTGTGCTCATTCATTTTTTCTCAATGAAAGGTTGTTTTTTCATTAAACAACAAAAAGGAAAAAAAGAAAGAAAAATGTGCTTTCAGTTGTTTATCTTTCACTTGTTAATGTAATTCAAAAATTTTGCTGATCTTTCAGATTACAAAGATTTGTAGATCAATTTGAGCTTTGTGATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTATTTGAGGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGGTATGGCTTGTAATTATTTTTATTTTTTATTCCTTCCCTTGTTTGGATTCCTTTATTGCAGGTTTTAATTGCTCCCATTTTTCATTTATTAGTGCCTGTTGTGCAAGATCTCCTTTCTTTCAGCCAAATGAATGTGAATGTTATGCAACGGGCTGGAAATCCTGTTACTGACCCAATCCTAACTGCTAGTATTCTTCATTTGGATGCCTCGTTACTGTTGCTTGTTCATTATTTCTTCATCTATCAATGAAGCAGTTCTGTCTCTGTCAAAAAAAGAAAAAAGAAAAAAAAACATTGTTTCGAAGTAAAGTCGTGGAATCCAGTGTCTGAAACGAATAAGCCAGAATGTTTGTAAACTCAATTGCAATAGTAATAATCAATGAAAAAAGCGTATTGAAAAAGAAAAGTTGGATTAATACATGGTTTTAAAATACATGTCCCTCAAGTATATATTTGGATGGACCCTTTTCTCTTTAAAAATTAATCTATTAAAATCCTCTAGATGTTTGTTTGAAGCTAATGTAGTGACTTATTTCTTGAAAAAAGTTTATAGAATTACTTGTTTTCTTGGAAGAAAAAAAAGTTTATTTGGAGTTGATTTCTTCTGTGACATACATTTTCCTTTTAAGCTCAGAAGTGCTTGAAGTGTTATATAAGGAAGCTGATAGAATAGCTTTTGGATGGAGTATATTCAGATTTTGCTTTGATTACTTGAAATGTTCTTGGAAGAGTAAACTTTTTCCAACTTATATTCCTAAAAGAGAGAGAGAGAGATGACCATAAAACCACTTCTCTTTGTTCAGTGAAAGTGGGCGCTTTTCCCTATTTTTCAGAAATGGTTACGGTTACTTGATTGTTTGGAAGATAACAAAGAATGTGTTTTGTATTCAGACCATATGGTTGCTCGATAATGTTGTCAACTGAAACTACGATTTGACAGTCCTACAAGTCTTGCATATGTGACGTTAGCCTAACACTGTTAATTGTTAACTTAATGTTGTATGTTCTATACATGTCACAATCGCAATGTGTTAGCAAAAAATGCTTGTAAGTTTGGAAATGAAGTGAAAGATTTGATGGATTGCCATTTTGATCTTGTCTGAGAGCTTTCATGTATTTATTATTATTTTTTTTTTATCTAAATAAGAGTGTTTAGGTTTCTTAAGTGCACCTATATATATATGCAACGGGCATAAGGTCTTTTAACACATCCCTCCTAAAGAACTTTTTACTTATTCACATGCTCTTGGGAAATAGTAAGGCAAGTCATGGTGGTTCTTTTTCCTCCTTTTCAAAGTTATTTTGCAACTCTAATATGTCCTCAGATTCTGGTGTAAAGCGTATTACTCTTCTTGTTATTCTTAGCCTAACATCTTTAAGCCTTATGATATTTTTATAATCTTTCCTTCTGGTTCTCACTGGTCAAATGGATTACAGAGTGGGAAGTGAAGGAAGGCAAAGAAATCACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTTAATGATGACTTCTCGTTGCAGCTGAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGAAGAGAATTTAGGCACTTTCTTTTTTTCATGTCAACACCTATGTTTAATTTGCACTGTTTGACCTTCAAAGACAGTTTTATTTTGCCTTCTATCACTCAAATAGTGTCTAACATCGGCATATTGAATACCTATGGCCTGTCATTGTCCAGAAGATGCGGCGACCAGAGATTAATTGTGTGGTAGTTACCTATTCAGAATTTGAAGTTTTACTGAAAAAAACCAAAAGTGATTTAAGCAATTGGAATTATAGATTGTTTAAACGATATAATTGTCCAAGAAAGTCAAATTTTAATGATCATAAATTTTTAT

mRNA sequence

AATAGATCTAATTGTCATGAAATTGAATTCCTAAAGTAATAATGATTTAGAAAGCATCGGCTTGCCGACTTGTCTCTCAAGATATCTCGACTCATTTTTCCAATAGAAAATCAATCAATACCAGACTCCCTCGATCTTTCCTGCTCCACGGCTCTCTCATCACAACTCTCTCCCAAGATTACAAAGATTTGTAGATCAATTTGAGCTTTGTGATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTATTTGAGGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTGAAGGAAGGCAAAGAAATCACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTTAATGATGACTTCTCGTTGCAGCTGAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGAAGAGAATTTAGGCACTTTCTTTTTTTCATGTCAACACCTATGTTTAATTTGCACTGTTTGACCTTCAAAGACAGTTTTATTTTGCCTTCTATCACTCAAATAGTGTCTAACATCGGCATATTGAATACCTATGGCCTGTCATTGTCCAGAAGATGCGGCGACCAGAGATTAATTGTGTGGTAGTTACCTATTCAGAATTTGAAGTTTTACTGAAAAAAACCAAAAGTGATTTAAGCAATTGGAATTATAGATTGTTTAAACGATATAATTGTCCAAGAAAGTCAAATTTTAATGATCATAAATTTTTAT

Coding sequence (CDS)

ATGGCAACTGAACTGAAAGCAGCTTCTGAGGAAGTGAAAGTTGACCTATTTGAGGATGATGACGAGTTTGAAGAGTTTGAGATTAATGAAGAGTGGGAAGTGAAGGAAGGCAAAGAAATCACTCAGCAATGGGAAGATGACTGGGATGATGATGATGTTAATGATGACTTCTCGTTGCAGCTGAAGAGAGAATTGGAGAACAATGCTGAGAAAAAATGA

Protein sequence

MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK
Homology
[Close]
BLAST of IVF0008708 vs. ExPASy Swiss-Prot
Match: Q9FL96 (Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.2e-21
Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E KAA E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKRELENNAEKK 73
          QLK+ELEN +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]
BLAST of IVF0008708 vs. ExPASy Swiss-Prot
Match: Q9XIR8 (Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1(I) PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.8e-20
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA E KAA+ E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKRELENNAEKK 73
           QL++ELEN  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of IVF0008708 vs. ExPASy Swiss-Prot
Match: Q3ZBR6 (26S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.3e-06
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 10 EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNA 69
          + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]
BLAST of IVF0008708 vs. ExPASy Swiss-Prot
Match: P60896 (26S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.3e-06
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 10 EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNA 69
          + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]
BLAST of IVF0008708 vs. ExPASy Swiss-Prot
Match: P60897 (26S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.3e-06
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 0 

Query: 10 EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNA 69
          + V + L E+DDEFEEF   E+W   +  E    WED+WDDD+V DDFS QL+ ELE + 
Sbjct: 6  QPVDLGLLEEDDEFEEFPA-EDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAELEKHG 65

Query: 70 EK 72
           K
Sbjct: 66 YK 66

[Close]
BLAST of IVF0008708 vs. ExPASy TrEMBL
Match: A0A0A0KIG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 73
          LKRELENNAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]
BLAST of IVF0008708 vs. ExPASy TrEMBL
Match: A0A1S3CMK4 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC103502626 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-29
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 73
          LKRELENNAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]
BLAST of IVF0008708 vs. ExPASy TrEMBL
Match: A0A6J1KGK6 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC111494033 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.1e-28
Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE+KAA+EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 73
          LKRELE+N EKK
Sbjct: 61 LKRELESNVEKK 72

[Close]
BLAST of IVF0008708 vs. ExPASy TrEMBL
Match: A0A6J1DJN7 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Momordica charantia OX=3673 GN=LOC111020683 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.5e-27
Identity = 66/72 (91.67%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATELKA +EE+KVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFS+Q
Sbjct: 1  MATELKAVTEEMKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSVQ 60

Query: 61 LKRELENNAEKK 73
          L+RELENN EKK
Sbjct: 61 LRRELENNGEKK 72

[Close]
BLAST of IVF0008708 vs. ExPASy TrEMBL
Match: A0A6J1KMT1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC111496037 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.0e-27
Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KA +EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEPKAGTEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 73
          LKRELE+NAE+K
Sbjct: 61 LKRELEDNAERK 72

[Close]
BLAST of IVF0008708 vs. NCBI nr
Match: XP_004144232.1 (protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED: protein DSS1 HOMOLOG ON CHROMOSOME V-like [Cucumis melo] >KGN47541.1 hypothetical protein Csa_019014 [Cucumis sativus])

HSP 1 Score: 135 bits (340), Expect = 8.36e-40
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 72
          LKRELENNAEKK
Sbjct: 61 LKRELENNAEKK 72

[Close]
BLAST of IVF0008708 vs. NCBI nr
Match: XP_023546762.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130 bits (327), Expect = 8.06e-38
Identity = 69/72 (95.83%), Postives = 72/72 (100.00%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATELKAA+EEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATELKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 72
          LKRELE+NAEKK
Sbjct: 61 LKRELESNAEKK 72

[Close]
BLAST of IVF0008708 vs. NCBI nr
Match: XP_022999790.1 (protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima])

HSP 1 Score: 130 bits (326), Expect = 1.15e-37
Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE+KAA+EEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEMKAATEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 72
          LKRELE+N EKK
Sbjct: 61 LKRELESNVEKK 72

[Close]
BLAST of IVF0008708 vs. NCBI nr
Match: XP_038884052.1 (protein DSS1 HOMOLOG ON CHROMOSOME V-like [Benincasa hispida])

HSP 1 Score: 129 bits (325), Expect = 1.82e-37
Identity = 72/76 (94.74%), Postives = 72/76 (94.74%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEW----EVKEGKEITQQWEDDWDDDDVNDD 60
          MATELKAASEEVKVDLFEDDDEFEEFEINEEW    EVKEGKEITQQWEDDWDDDDVNDD
Sbjct: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWITEWEVKEGKEITQQWEDDWDDDDVNDD 60

Query: 61 FSLQLKRELENNAEKK 72
          FSLQLKRELENNAEKK
Sbjct: 61 FSLQLKRELENNAEKK 76

[Close]
BLAST of IVF0008708 vs. NCBI nr
Match: KAG6599102.1 (Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128 bits (321), Expect = 6.64e-37
Identity = 68/72 (94.44%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60
          MATE KAA+EEVKVDLFEDDDEFEEFEI+EEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ
Sbjct: 1  MATEQKAATEEVKVDLFEDDDEFEEFEIDEEWEVKEGKEITQQWEDDWDDDDVNDDFSLQ 60

Query: 61 LKRELENNAEKK 72
          LKRELE+NAEKK
Sbjct: 61 LKRELESNAEKK 72

[Close]
BLAST of IVF0008708 vs. TAIR 10
Match: AT5G45010.1 (DSS1 homolog on chromosome V )

HSP 1 Score: 100.9 bits (250), Expect = 4.4e-22
Identity = 56/73 (76.71%), Postives = 63/73 (86.30%), Query Frame = 0 

Query: 1  MATELKAASEEVKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFSL 60
          MA E KAA E VKVDLFEDDDEFEEFEINE+W E +E KE++ QWEDDWDDDDV+DDFS 
Sbjct: 1  MAAEPKAAVEVVKVDLFEDDDEFEEFEINEDWLEKEEVKEVSLQWEDDWDDDDVSDDFSR 60

Query: 61 QLKRELENNAEKK 73
          QLK+ELEN +EKK
Sbjct: 61 QLKKELENASEKK 73

[Close]
BLAST of IVF0008708 vs. TAIR 10
Match: AT1G64750.1 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA E KAA+ E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKRELENNAEKK 73
           QL++ELEN  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of IVF0008708 vs. TAIR 10
Match: AT1G64750.2 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 99.4 bits (246), Expect = 1.3e-21
Identity = 55/74 (74.32%), Postives = 64/74 (86.49%), Query Frame = 0 

Query: 1  MATELKAASEE-VKVDLFEDDDEFEEFEINEEW-EVKEGKEITQQWEDDWDDDDVNDDFS 60
          MA E KAA+ E VK+DLFEDDDEFEEFEINE+W E +E KE++QQWEDDWDDDDVNDDFS
Sbjct: 1  MAAEPKAATAEVVKMDLFEDDDEFEEFEINEDWLEKEEVKEVSQQWEDDWDDDDVNDDFS 60

Query: 61 LQLKRELENNAEKK 73
           QL++ELEN  +KK
Sbjct: 61 RQLRKELENGTDKK 74

[Close]
BLAST of IVF0008708 vs. TAIR 10
Match: AT1G64750.3 (deletion of SUV3 suppressor 1(I) )

HSP 1 Score: 79.3 bits (194), Expect = 1.4e-15
Identity = 55/115 (47.83%), Postives = 64/115 (55.65%), Query Frame = 0 

Query: 1   MATELKAASEE-VKVDLFEDDDEFEEFEINE----------------------------- 60
           MA E KAA+ E VK+DLFEDDDEFEEFEINE                             
Sbjct: 1   MAAEPKAATAEVVKMDLFEDDDEFEEFEINEVDSSDLTSSCIERIDKDGLVYELSRSDMK 60

Query: 61  ------------EW-EVKEGKEITQQWEDDWDDDDVNDDFSLQLKRELENNAEKK 73
                       +W E +E KE++QQWEDDWDDDDVNDDFS QL++ELEN  +KK
Sbjct: 61  TNLFDVNFRCEIDWLEKEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELENGTDKK 115

The following BLAST results are available for this feature:
BLAST of IVF0008708 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FL966.2e-2176.71Protein DSS1 HOMOLOG ON CHROMOSOME V OS=Arabidopsis thaliana OX=3702 GN=DSS1(V) ... [more]
Q9XIR81.8e-2074.32Protein DELETION OF SUV3 SUPPRESSOR 1(I) OS=Arabidopsis thaliana OX=3702 GN=DSS1... [more]
Q3ZBR67.3e-0650.0026S proteasome complex subunit SEM1 OS=Bos taurus OX=9913 GN=SEM1 PE=3 SV=1[more]
P608967.3e-0650.0026S proteasome complex subunit SEM1 OS=Homo sapiens OX=9606 GN=SEM1 PE=1 SV=1[more]
P608977.3e-0650.0026S proteasome complex subunit SEM1 OS=Mus musculus OX=10090 GN=Sem1 PE=3 SV=1[more]
BLAST of IVF0008708 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIG91.7e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358050 PE=4 SV=1[more]
A0A1S3CMK41.7e-29100.00protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucumis melo OX=3656 GN=LOC10350262... [more]
A0A6J1KGK67.1e-2894.44protein DELETION OF SUV3 SUPPRESSOR 1(I)-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1DJN73.5e-2791.67protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1KMT16.0e-2793.06protein DSS1 HOMOLOG ON CHROMOSOME V-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
BLAST of IVF0008708 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144232.18.36e-40100.00protein DSS1 HOMOLOG ON CHROMOSOME V [Cucumis sativus] >XP_008464856.1 PREDICTED... [more]
XP_023546762.18.06e-3895.83protein DSS1 HOMOLOG ON CHROMOSOME V-like isoform X2 [Cucurbita pepo subsp. pepo... [more]
XP_022999790.11.15e-3794.44protein DELETION OF SUV3 SUPPRESSOR 1(I)-like [Cucurbita maxima][more]
XP_038884052.11.82e-3794.74protein DSS1 HOMOLOG ON CHROMOSOME V-like [Benincasa hispida][more]
KAG6599102.16.64e-3794.44Protein DSS1-like ON CHROMOSOME V, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of IVF0008708 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G45010.14.4e-2276.71DSS1 homolog on chromosome V [more]
AT1G64750.11.3e-2174.32deletion of SUV3 suppressor 1(I) [more]
AT1G64750.21.3e-2174.32deletion of SUV3 suppressor 1(I) [more]
AT1G64750.31.4e-1547.83deletion of SUV3 suppressor 1(I) [more]
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007834DSS1/SEM1SMARTSM01385DSS1_SEM1_2coord: 9..67
e-value: 1.1E-19
score: 81.4
IPR007834DSS1/SEM1PFAMPF05160DSS1_SEM1coord: 10..66
e-value: 6.4E-17
score: 61.4
IPR007834DSS1/SEM1PANTHERPTHR1677126 PROTEASOME COMPLEX SUBUNIT DSS1coord: 1..72
NoneNo IPR availablePANTHERPTHR16771:SF8OS01G0316800 PROTEINcoord: 1..72

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
IVF0008708.2IVF0008708.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0043248 proteasome assembly
cellular_component GO:0008541 proteasome regulatory particle, lid subcomplex