Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTGTGTTATGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCAAAACGAAAGCTATTGGAGTTGGAGAAGGAAAACGATTCTTTAAATACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATGAAGAGATAGAAGCTAAAAAGGTATGCATTACAGATTTGAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTCCAAAATGCATTACATGAACAAGCCACGTCATCTCAATAG
mRNA sequence
ATGAATTGTGTTATGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCAAAACGAAAGCTATTGGAGTTGGAGAAGGAAAACGATTCTTTAAATACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATGAAGAGATAGAAGCTAAAAAGGTATGCATTACAGATTTGAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTCCAAAATGCATTACATGAACAAGCCACGTCATCTCAATAG
Coding sequence (CDS)
ATGAATTGTGTTATGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATACTCAAAGAGATTTAGACGAGGCAAAACGAAAGCTATTGGAGTTGGAGAAGGAAAACGATTCTTTAAATACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATGAAGAGATAGAAGCTAAAAAGGTATGCATTACAGATTTGAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTCCAAAATGCATTACATGAACAAGCCACGTCATCTCAATAG
Protein sequence
MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ
Homology
BLAST of IVF0008567 vs. ExPASy TrEMBL
Match:
A0A5A7VDD9 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00070 PE=4 SV=1)
HSP 1 Score: 196.1 bits (497), Expect = 7.8e-47
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQ+RKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQMRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 109
LLRNIANLHEEIEAKKVCITDLKHEIE+LNG+ALEFQNALHEQA SSQ
Sbjct: 61 LLRNIANLHEEIEAKKVCITDLKHEIEKLNGIALEFQNALHEQAISSQ 108
BLAST of IVF0008567 vs. ExPASy TrEMBL
Match:
A0A5A7SGB8 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00210 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 5.1e-46
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVNTQ LDEAKRK LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQSYLDEAKRKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 109
LLRNI NLHEEIEAKKVCITDLKHE+ERLNGVALEFQNALHEQATSSQ
Sbjct: 61 LLRNITNLHEEIEAKKVCITDLKHEVERLNGVALEFQNALHEQATSSQ 108
BLAST of IVF0008567 vs. ExPASy TrEMBL
Match:
A0A5D3C8B8 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G002190 PE=4 SV=1)
HSP 1 Score: 193.4 bits (490), Expect = 5.1e-46
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVNTQ LDEAKRK LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQSYLDEAKRKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 109
LLRNI NLHEEIEAKKVCITDLKHE+ERLNGVALEFQNALHEQATSSQ
Sbjct: 61 LLRNITNLHEEIEAKKVCITDLKHEVERLNGVALEFQNALHEQATSSQ 108
BLAST of IVF0008567 vs. ExPASy TrEMBL
Match:
A0A5A7SM49 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold23528G00010 PE=4 SV=1)
HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 100/108 (92.59%), Postives = 104/108 (96.30%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVN QRDLDEAKRK LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNIQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 109
LLRNIANLHEEIEA+KVCITDLKHEIE+LNG+ LEFQNALHEQA SSQ
Sbjct: 61 LLRNIANLHEEIEAEKVCITDLKHEIEKLNGITLEFQNALHEQAISSQ 108
BLAST of IVF0008567 vs. ExPASy TrEMBL
Match:
A0A5D3CE19 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00510 PE=4 SV=1)
HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKL EEVKKWVQQAVNT RDLDEAK+K LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLGEEVKKWVQQAVNTPRDLDEAKQKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 109
LLRNIA+LH E+EAKKVCIT LKHEIERLNGVALEFQNALHEQATSSQ
Sbjct: 61 LLRNIADLH-EVEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQ 107
BLAST of IVF0008567 vs. NCBI nr
Match:
KAA0065294.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 192 bits (487), Expect = 4.19e-59
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVNTQRDLDEAKRK LELEKENDSLNTEAIQ+RKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRKRLELEKENDSLNTEAIQMRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 108
LLRNIANLHEEIEAKKVCITDLKHEIE+LNG+ALEFQNALHEQA SSQ
Sbjct: 61 LLRNIANLHEEIEAKKVCITDLKHEIEKLNGIALEFQNALHEQAISSQ 108
BLAST of IVF0008567 vs. NCBI nr
Match:
KAA0025321.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 187 bits (476), Expect = 1.95e-57
Identity = 100/108 (92.59%), Postives = 104/108 (96.30%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVN QRDLDEAKRK LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNIQRDLDEAKRKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 108
LLRNIANLHEEIEA+KVCITDLKHEIE+LNG+ LEFQNALHEQA SSQ
Sbjct: 61 LLRNIANLHEEIEAEKVCITDLKHEIEKLNGITLEFQNALHEQAISSQ 108
BLAST of IVF0008567 vs. NCBI nr
Match:
TYK07484.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 189 bits (480), Expect = 5.50e-57
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVNTQ LDEAKRK LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQSYLDEAKRKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 108
LLRNI NLHEEIEAKKVCITDLKHE+ERLNGVALEFQNALHEQATSSQ
Sbjct: 61 LLRNITNLHEEIEAKKVCITDLKHEVERLNGVALEFQNALHEQATSSQ 108
BLAST of IVF0008567 vs. NCBI nr
Match:
TYK09458.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 178 bits (451), Expect = 1.99e-55
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKL EEVKKWVQQAVNT RDLDEAK+K LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLGEEVKKWVQQAVNTPRDLDEAKQKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 108
LLRNIA+LHE +EAKKVCIT LKHEIERLNGVALEFQNALHEQATSSQ
Sbjct: 61 LLRNIADLHE-VEAKKVCITYLKHEIERLNGVALEFQNALHEQATSSQ 107
BLAST of IVF0008567 vs. NCBI nr
Match:
KAA0025178.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 189 bits (480), Expect = 3.89e-55
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0
Query: 1 MNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKR 60
MNCV+ATENEKLREEVKKWVQQAVNTQ LDEAKRK LELEKENDSLNTEAIQVRKKNKR
Sbjct: 1 MNCVLATENEKLREEVKKWVQQAVNTQSYLDEAKRKRLELEKENDSLNTEAIQVRKKNKR 60
Query: 61 LLRNIANLHEEIEAKKVCITDLKHEIERLNGVALEFQNALHEQATSSQ 108
LLRNI NLHEEIEAKKVCITDLKHE+ERLNGVALEFQNALHEQATSSQ
Sbjct: 61 LLRNITNLHEEIEAKKVCITDLKHEVERLNGVALEFQNALHEQATSSQ 108
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VDD9 | 7.8e-47 | 94.44 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5A7SGB8 | 5.1e-46 | 94.44 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5D3C8B8 | 5.1e-46 | 94.44 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5A7SM49 | 1.5e-45 | 92.59 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
A0A5D3CE19 | 1.2e-42 | 91.67 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
Match Name | E-value | Identity | Description | |
KAA0065294.1 | 4.19e-59 | 94.44 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
KAA0025321.1 | 1.95e-57 | 92.59 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
TYK07484.1 | 5.50e-57 | 94.44 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
TYK09458.1 | 1.99e-55 | 91.67 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
KAA0025178.1 | 3.89e-55 | 94.44 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |