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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGTGGTGGTGGTACTGATGGATTTCCAGAAAAATATTGCAGAGGAAGCTCTGATATCTGGTTTCAAGTACTTTCCATCTTCATTAACATTGTTTTTTTTTTATAACAATATTTCTTTTTACAATTCTTACTCTTACTCTAGGAAAATTGTAGGATTGTCGTTCTCTTCAAACTCAAAGGTGGGAGATGGGGAATTTTGTTTTTCAGGATGGAGACGAAAAGGTGACACCTCACATCTTTTATAGGATGCATTATGCTGCGAATTTCTAG mRNA sequence ATGGTGGTGGTGGTACTGATGGATTTCCAGAAAAATATTGCAGAGGAAGCTCTGATATCTGGTTTCAAGTGGGAGATGGGGAATTTTGTTTTTCAGGATGGAGACGAAAAGGTGACACCTCACATCTTTTATAGGATGCATTATGCTGCGAATTTCTAG Coding sequence (CDS) ATGGTGGTGGTGGTACTGATGGATTTCCAGAAAAATATTGCAGAGGAAGCTCTGATATCTGGTTTCAAGTGGGAGATGGGGAATTTTGTTTTTCAGGATGGAGACGAAAAGGTGACACCTCACATCTTTTATAGGATGCATTATGCTGCGAATTTCTAG Protein sequence MVVVVLMDFQKNIAEEALISGFKWEMGNFVFQDGDEKVTPHIFYRMHYAANF
Homology
BLAST of IVF0008486 vs. ExPASy TrEMBL
Match: A0A5A7TYE8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001220 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.4e-09 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 23 KWEMGNFVFQDGDEKVTPHIFYRMHYAANF 53
+WEMGNFVFQDGDEKVTPHIFYRMHYAANF
Sbjct: 916 RWEMGNFVFQDGDEKVTPHIFYRMHYAANF 945
BLAST of IVF0008486 vs. ExPASy TrEMBL
Match: A0A0A0LGI5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033380 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.6e-08 Identity = 40/67 (59.70%), Postives = 41/67 (61.19%), Query Frame = 0
Query: 1 MVVVVLMDFQKNIAEEALISGFK-------------WEMGN---------FVFQDGDEKV 46
MVV+VLMDFQ NIAEEALISGF EMGN FVFQDGDEK
Sbjct: 1 MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA 60
BLAST of IVF0008486 vs. NCBI nr
Match: KGN60983.1 (hypothetical protein Csa_021168 [Cucumis sativus]) HSP 1 Score: 65.1 bits (157), Expect = 2.91e-12 Identity = 40/67 (59.70%), Postives = 41/67 (61.19%), Query Frame = 0
Query: 1 MVVVVLMDFQKNIAEEALISGFK-------------WEMGNF---------VFQDGDEKV 45
MVV+VLMDFQ NIAEEALISGF EMGNF VFQDGDEK
Sbjct: 1 MVVMVLMDFQTNIAEEALISGFNKIVGLSFSSKSKVGEMGNFFFFFFFLDFVFQDGDEKA 60
BLAST of IVF0008486 vs. NCBI nr
Match: KAA0048054.1 (uncharacterized protein E6C27_scaffold385G001220 [Cucumis melo var. makuwa]) HSP 1 Score: 69.7 bits (169), Expect = 3.99e-12 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
Query: 23 KWEMGNFVFQDGDEKVTPHIFYRMHYAANF 52
+WEMGNFVFQDGDEKVTPHIFYRMHYAANF
Sbjct: 916 RWEMGNFVFQDGDEKVTPHIFYRMHYAANF 945
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TYE8 | 2.4e-09 | 96.67 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A0A0LGI5 | 2.6e-08 | 59.70 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G033380 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN60983.1 | 2.91e-12 | 59.70 | hypothetical protein Csa_021168 [Cucumis sativus] | [more] |
| KAA0048054.1 | 3.99e-12 | 96.67 | uncharacterized protein E6C27_scaffold385G001220 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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