IVF0006871 (gene) Melon (IVF77) v1

Overview


Name	IVF0006871
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	LIM domain-containing protein WLIM1
Location	chr03: 26323537 .. 26325048 (+)
RNA-Seq Expression	IVF0006871
Synteny	IVF0006871

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTACCTCTCATGATTCAATTTGAGATTTCTTTCTCTTTAATTAATTTTTTAGTGATTTGATTTCAAGACAGCTACAGGTTGAGACATTTTATCAAAGAAACAAGTTGTTGGGTCTGCTCCCAAGATCCAACGAAATGATTGTTTGCTTCCCCACTGACATTAATCATCTATATATCCTCTGCTTCATCTCTCCATTCTTCTAAATTAAAGCTCACTTCTTCCATTGAAGCCTCCACAGACAAGAATAGATCTTCGTTCTTGTAGTGAACAACACTCCAAAACCATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTTGTCGACAAGCTGACCGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCATCATTGCAAAGGCACTCTGAAGGTGAAACCAATGGTTCCACCCCCCTTATTTTTTTGTTTGTGACTGATGAGGGAAATGGAACTTTGAAACTGATGTCGTTGATCTGTTTTCAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTATTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGACAAAAGCTTTGAAGGTACAAATTATAAGTTCTGTTGGATGGATGGATCTGATTTCTCAGATTTTTCATTTTAGGTTTCTGTTGATAACTGAATCATTTTGGTTTTTTCTTTTTTCTTGTTTTCTATTTTGTGTGTGTTTTTAGGAACGCCAAAGATCGTAAAGCCAGAGAAACCGATTGATAGCGAGGTAATTCCCTGTTTGCTTGTACTTGAGCCTGTTACAGCTGATGTAATTCTTCTAATTCTACCATTGATCTTGAAAATACATCAACAGAAACCGACAGCAAACAAGGTTGCTAGCATGTTTGGAGGAACCAGAGATAAGTGTCTTGGCTGTGACAACACTGTTTATCCAACAGAAAAGGTAACAACAATATACAAAAGTTTTCTTTTCTGCTTCCTGCATTTCATTTTATTAACTGAACGAGAAAATCCAACCTCTGTAAATGGTCTACGTTTCAAGGTTACTGTGAACGGAATTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCGAACTATATTGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTAATCAAAGAGAAAGGAAACTTGAGTCAACTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGATTTTTCAGAATCAAGCTTTATCAGAATCAAAGGCTGTACACTAAGAGAAGTACTGGCATCCATTGCGTTTCGTGTTAAAAGTGTGTTTTTGGCCTGTCTGTTTCTCAAATATTCAAATAACATGCTCAAACAGATGCCAAGATCTGTTTGATTTTCACCATCTTTCGTCTTAAAAGAAGTGTGGCATGTTTGTAGATTTGAATCATATTCCTATCAATTCCAAT

mRNA sequence

CGTACCTCTCATGATTCAATTTGAGATTTCTTTCTCTTTAATTAATTTTTTAGTGATTTGATTTCAAGACAGCTACAGGTTGAGACATTTTATCAAAGAAACAAGTTGTTGGGTCTGCTCCCAAGATCCAACGAAATGATTGTTTGCTTCCCCACTGACATTAATCATCTATATATCCTCTGCTTCATCTCTCCATTCTTCTAAATTAAAGCTCACTTCTTCCATTGAAGCCTCCACAGACAAGAATAGATCTTCGTTCTTGTAGTGAACAACACTCCAAAACCATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTTGTCGACAAGCTGACCGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCATCATTGCAAAGGCACTCTGAAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTATTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGACAAAAGCTTTGAAGGAACGCCAAAGATCGTAAAGCCAGAGAAACCGATTGATAGCGAGGTAATTCCCTGTTTGCTTGTACTTGAGCCTGTTACAGCTGATGTAATTCTTCTAATTCTACCATTGATCTTGAAAATACATCAACAGAAACCGACAGCAAACAAGGTTGCTAGCATGTTTGGAGGAACCAGAGATAAGTGTCTTGGCTGTGACAACACTGTTTATCCAACAGAAAAGGTTACTGTGAACGGAATTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCGAACTATATTGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTAATCAAAGAGAAAGGAAACTTGAGTCAACTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGATTTTTCAGAATCAAGCTTTATCAGAATCAAAGGCTGTACACTAAGAGAAGTACTGGCATCCATTGCGTTTCGTGTTAAAAGTGTGTTTTTGGCCTGTCTGTTTCTCAAATATTCAAATAACATGCTCAAACAGATGCCAAGATCTGTTTGATTTTCACCATCTTTCGTCTTAAAAGAAGTGTGGCATGTTTGTAGATTTGAATCATATTCCTATCAATTCCAAT

Coding sequence (CDS)

ATGGCTTTTGCAGGCACAACCCAGAAATGTATGGCTTGTGAAAAAACCGTGTATCTTGTCGACAAGCTGACCGCTGATAACCGCATCTACCACAAAGCCTGTTTCAGATGCCATCATTGCAAAGGCACTCTGAAGCTCAGCAACTACAATTCCTTTGAGGGAGTGCTTTATTGTAGGCCACACTTTGATCAGATTTTTAAGAGGACTGGCAGTCTTGACAAAAGCTTTGAAGGAACGCCAAAGATCGTAAAGCCAGAGAAACCGATTGATAGCGAGGTAATTCCCTGTTTGCTTGTACTTGAGCCTGTTACAGCTGATGTAATTCTTCTAATTCTACCATTGATCTTGAAAATACATCAACAGAAACCGACAGCAAACAAGGTTGCTAGCATGTTTGGAGGAACCAGAGATAAGTGTCTTGGCTGTGACAACACTGTTTATCCAACAGAAAAGGTTACTGTGAACGGAATTCCATACCATAAAAGTTGTTTCAAATGCTGCCATGGAGGATGCACGATCAGCCCTTCGAACTATATTGCTCATGAGGGGCGACTTTACTGCAAGCACCACCATATCCAACTAATCAAAGAGAAAGGAAACTTGAGTCAACTTGAGGGAGACCATGAAAAGATAACAGCAAAGGAGAAAATCAATGGCGGAGAGGTGGTGGCTTCAGAAGCCTGA

Protein sequence

MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQQKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA

Homology

[Close]

BLAST of IVF0006871 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.4e-90
Identity = 156/217 (71.89%), Postives = 172/217 (79.26%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQ FKRTGSL+KSFEGTPKI KP++P++ E                            
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            +P   KV++MFGGTR+KC+GCD TVYP EKV+VNG  YHKSCFKC HGGCTISPSNYIA
Sbjct: 121 -RPAGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKI 218
           HEG+LYCKHHHIQLIKEKGNLSQLEG  E   AK+K+
Sbjct: 181 HEGKLYCKHHHIQLIKEKGNLSQLEGGGEN-AAKDKV 187

[Close]

BLAST of IVF0006871 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 8.9e-74
Identity = 127/204 (62.25%), Postives = 147/204 (72.06%), Query Frame = 0


Query: 2   AFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRPH 61
           +F GTTQKC  CEKTVYLVDKL A+ R+YHKACFRCHHC  TLKLSN+NSF+GV+YCR H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 62  FDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQQ 121
           FDQ+FKRTGSL+KSF+GTPK  KPE+                                Q+
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKF-KPERTFS-----------------------------QE 122

Query: 122 KPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIAH 181
             +AN+++S F GTRDKC  C   VYP E+V V+G  YH++CFKCCHGGCTISPSNYIAH
Sbjct: 123 TQSANRLSSFFEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAH 176

Query: 182 EGRLYCKHHHIQLIKEKGNLSQLE 206
           EGRLYCKHHHIQL K+KGN SQLE
Sbjct: 183 EGRLYCKHHHIQLFKKKGNYSQLE 176

[Close]

BLAST of IVF0006871 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.4e-57
Identity = 107/204 (52.45%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HF+Q+FK +GS  K+F+       P KP+  +  P                        +
Sbjct: 61  HFEQLFKESGSFSKNFQ------SPAKPLTDKPTP------------------------E 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
              T +++A MF GT+DKC  C  TVYP EKVTV    YHKSCFKC HGGC ISPSNY A
Sbjct: 121 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAA 174

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQL 205
            EG LYCKHH  QL KEKG+ + L
Sbjct: 181 LEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of IVF0006871 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.1e-55
Identity = 102/204 (50.00%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HF+Q+FK +GS +K+F+   K      P                               +
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTP-------------------------------E 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
              T ++VA  F GT++KC  C  TVYP EKVTV    YHKSCFKC HGGC ISPSNY A
Sbjct: 121 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAA 173

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQL 205
            EG LYCKHH  QL KEKG+ + L
Sbjct: 181 LEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of IVF0006871 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.0e-49
Identity = 93/204 (45.59%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT  KC AC+KTVY++D LT +   YHK+CFRC HCKGTL +SNY+S +GVLYC+P
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HF+Q+FK +G+  K+F+      K EKP D                            H 
Sbjct: 61  HFEQLFKESGNYSKNFQAG----KTEKPND----------------------------HL 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            + T +K++S F GT+DKC  C  TVYP EKVT+ G  YHK+CF+C H GC ++ S+Y +
Sbjct: 121 TR-TPSKLSSFFSGTQDKCATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYAS 171

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQL 205
             G LYCK H  QL  EKG+ + +
Sbjct: 181 LNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of IVF0006871 vs. ExPASy TrEMBL
Match: A0A1S3BBD7 (LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.5e-112
Identity = 198/227 (87.22%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE                            
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            KPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 -KPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 228
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 198

[Close]

BLAST of IVF0006871 vs. ExPASy TrEMBL
Match: A0A5A7V272 (LIM domain-containing protein WLIM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00910 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.5e-111
Identity = 200/227 (88.11%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQIFKRTGSLDKSFE                           ADVILLILPLILKIHQ
Sbjct: 61  HFDQIFKRTGSLDKSFE---------------------------ADVILLILPLILKIHQ 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
           QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 228
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 200

[Close]

BLAST of IVF0006871 vs. ExPASy TrEMBL
Match: A0A0A0LNS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.7e-110
Identity = 195/227 (85.90%), Postives = 196/227 (86.34%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE                            
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            +PTANKVAS FGGTRDKCLGCDNTVYPTEKVTVNG PYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 -RPTANKVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 228
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 198

[Close]

BLAST of IVF0006871 vs. ExPASy TrEMBL
Match: A0A6J1BT53 (LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC111004606 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.5e-108
Identity = 192/227 (84.58%), Postives = 195/227 (85.90%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID E                            
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            KPTANKVASMFGGTRDKCLGC+NTVYPTEKVTVNG PYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 -KPTANKVASMFGGTRDKCLGCNNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 228
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITA+EKINGGE VASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAREKINGGE-VASEA 197

[Close]

BLAST of IVF0006871 vs. ExPASy TrEMBL
Match: A0A6J1K7W9 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111492481 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.1e-106
Identity = 189/227 (83.26%), Postives = 193/227 (85.02%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKP+DSE                            
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPVDSE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            KPTA KVASMFGGTRDKCLGC+NTVYPTEKVTVNG PYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 -KPTAKKVASMFGGTRDKCLGCNNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 228
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKI +KEKIN GE VASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKIPSKEKIN-GEAVASEA 197

[Close]

BLAST of IVF0006871 vs. NCBI nr
Match: KAE8652064.1 (hypothetical protein Csa_018727 [Cucumis sativus])

HSP 1 Score: 462 bits (1189), Expect = 2.90e-164
Identity = 221/227 (97.36%), Postives = 223/227 (98.24%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLL+LE VTADVILL LPLILKIHQ
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLILELVTADVILLFLPLILKIHQ 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
           Q+PTANKVAS FGGTRDKCLGCDNTVYPTEKVTVNG PYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 QRPTANKVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 227
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 227

[Close]

BLAST of IVF0006871 vs. NCBI nr
Match: XP_008444540.1 (PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo])

HSP 1 Score: 409 bits (1052), Expect = 7.88e-144
Identity = 198/227 (87.22%), Postives = 198/227 (87.22%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE                            
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            KPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 -KPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 227
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 198

[Close]

BLAST of IVF0006871 vs. NCBI nr
Match: KAA0060957.1 (LIM domain-containing protein WLIM1 [Cucumis melo var. makuwa])

HSP 1 Score: 407 bits (1046), Expect = 6.96e-143
Identity = 200/227 (88.11%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQIFKRTGSLDKSFE                           ADVILLILPLILKIHQ
Sbjct: 61  HFDQIFKRTGSLDKSFE---------------------------ADVILLILPLILKIHQ 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
           QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 227
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 200

[Close]

BLAST of IVF0006871 vs. NCBI nr
Match: XP_004142897.1 (LIM domain-containing protein WLIM1 [Cucumis sativus] >XP_031737336.1 LIM domain-containing protein WLIM1 [Cucumis sativus])

HSP 1 Score: 404 bits (1038), Expect = 1.07e-141
Identity = 195/227 (85.90%), Postives = 196/227 (86.34%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE                            
Sbjct: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            +PTANKVAS FGGTRDKCLGCDNTVYPTEKVTVNG PYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 -RPTANKVASKFGGTRDKCLGCDNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 227
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 198

[Close]

BLAST of IVF0006871 vs. NCBI nr
Match: XP_038886389.1 (LIM domain-containing protein WLIM1-like [Benincasa hispida])

HSP 1 Score: 400 bits (1027), Expect = 5.10e-140
Identity = 192/227 (84.58%), Postives = 195/227 (85.90%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQ+FKRTGSLDKSFEGTPKIVKPEKPID E                            
Sbjct: 61  HFDQLFKRTGSLDKSFEGTPKIVKPEKPIDGE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            KPTANKVAS FGGTRDKCLGC+NTVYPTEKVTVNG PYHKSCFKCCHGGCTISPSNYIA
Sbjct: 121 -KPTANKVASKFGGTRDKCLGCNNTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEVVASEA 227
           HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGE+VASEA
Sbjct: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKINGGEMVASEA 198

[Close]

BLAST of IVF0006871 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 334.0 bits (855), Expect = 9.7e-92
Identity = 156/217 (71.89%), Postives = 172/217 (79.26%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           MAFAGTTQKCMAC+KTVYLVDKLTADNR+YHKACFRCHHCKGTLKLSNYNSFEGVLYCRP
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HFDQ FKRTGSL+KSFEGTPKI KP++P++ E                            
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGE---------------------------- 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
            +P   KV++MFGGTR+KC+GCD TVYP EKV+VNG  YHKSCFKC HGGCTISPSNYIA
Sbjct: 121 -RPAGTKVSNMFGGTREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIA 180

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQLEGDHEKITAKEKI 218
           HEG+LYCKHHHIQLIKEKGNLSQLEG  E   AK+K+
Sbjct: 181 HEGKLYCKHHHIQLIKEKGNLSQLEGGGEN-AAKDKV 187

[Close]

BLAST of IVF0006871 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 223.0 bits (567), Expect = 2.4e-58
Identity = 107/204 (52.45%), Postives = 128/204 (62.75%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHKACF+C HCK  L+LSNY+S EGV+YCRP
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HF+Q+FK +GS  K+F+       P KP+  +  P                        +
Sbjct: 61  HFEQLFKESGSFSKNFQ------SPAKPLTDKPTP------------------------E 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
              T +++A MF GT+DKC  C  TVYP EKVTV    YHKSCFKC HGGC ISPSNY A
Sbjct: 121 LNRTPSRLAGMFSGTQDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAA 174

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQL 205
            EG LYCKHH  QL KEKG+ + L
Sbjct: 181 LEGILYCKHHFAQLFKEKGSYNHL 174

[Close]

BLAST of IVF0006871 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-56
Identity = 102/204 (50.00%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HF+Q+FK +GS +K+F+   K      P                               +
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTP-------------------------------E 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
              T ++VA  F GT++KC  C  TVYP EKVTV    YHKSCFKC HGGC ISPSNY A
Sbjct: 121 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAA 173

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQL 205
            EG LYCKHH  QL KEKG+ + L
Sbjct: 181 LEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of IVF0006871 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-56
Identity = 102/204 (50.00%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HF+Q+FK +GS +K+F+   K      P                               +
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTP-------------------------------E 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
              T ++VA  F GT++KC  C  TVYP EKVTV    YHKSCFKC HGGC ISPSNY A
Sbjct: 121 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAA 173

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQL 205
            EG LYCKHH  QL KEKG+ + L
Sbjct: 181 LEGILYCKHHFAQLFKEKGSYNHL 173

[Close]

BLAST of IVF0006871 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 215.3 bits (547), Expect = 5.0e-56
Identity = 102/204 (50.00%), Postives = 124/204 (60.78%), Query Frame = 0


Query: 1   MAFAGTTQKCMACEKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60
           M+F GT QKC ACEKTVY V+ L+AD   YHK+CF+C HCK  L+LS+Y+S EGVLYC+P
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFDQIFKRTGSLDKSFEGTPKIVKPEKPIDSEVIPCLLVLEPVTADVILLILPLILKIHQ 120
           HF+Q+FK +GS +K+F+   K      P                               +
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTP-------------------------------E 120

Query: 121 QKPTANKVASMFGGTRDKCLGCDNTVYPTEKVTVNGIPYHKSCFKCCHGGCTISPSNYIA 180
              T ++VA  F GT++KC  C  TVYP EKVTV    YHKSCFKC HGGC ISPSNY A
Sbjct: 121 LTRTPSRVAGRFSGTQEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAA 173

Query: 181 HEGRLYCKHHHIQLIKEKGNLSQL 205
            EG LYCKHH  QL KEKG+ + L
Sbjct: 181 LEGILYCKHHFAQLFKEKGSYNHL 173

The following BLAST results are available for this feature:

BLAST of IVF0006871 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	1.4e-90	71.89	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	8.9e-74	62.25	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
O04193	3.4e-57	52.45	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	7.1e-55	50.00	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O80839	2.0e-49	45.59	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of IVF0006871 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BBD7	6.5e-112	87.22	LIM domain-containing protein WLIM1 OS=Cucumis melo OX=3656 GN=LOC103487830 PE=4...	[more]
A0A5A7V272	1.5e-111	88.11	LIM domain-containing protein WLIM1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0LNS7	2.7e-110	85.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354680 PE=4 SV=1	[more]
A0A6J1BT53	7.5e-108	84.58	LIM domain-containing protein WLIM1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1K7W9	3.1e-106	83.26	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of IVF0006871 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652064.1	2.90e-164	97.36	hypothetical protein Csa_018727 [Cucumis sativus]	[more]
XP_008444540.1	7.88e-144	87.22	PREDICTED: LIM domain-containing protein WLIM1 [Cucumis melo]	[more]
KAA0060957.1	6.96e-143	88.11	LIM domain-containing protein WLIM1 [Cucumis melo var. makuwa]	[more]
XP_004142897.1	1.07e-141	85.90	LIM domain-containing protein WLIM1 [Cucumis sativus] >XP_031737336.1 LIM domain...	[more]
XP_038886389.1	5.10e-140	84.58	LIM domain-containing protein WLIM1-like [Benincasa hispida]	[more]

BLAST of IVF0006871 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	9.7e-92	71.89	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	2.4e-58	52.45	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	5.0e-56	50.00	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	5.0e-56	50.00	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	5.0e-56	50.00	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 5.2E-10 score: 49.3 coord: 138..190 e-value: 2.7E-11 score: 53.5
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..63 e-value: 1.7E-9 score: 37.8 coord: 139..193 e-value: 4.9E-11 score: 42.7
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 137..197 score: 12.1474
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.0285
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 4..74 e-value: 6.1E-19 score: 70.0 coord: 134..203 e-value: 2.5E-17 score: 64.8
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 117..214
None	No IPR available	PANTHER	PTHR24206:SF77	LIM DOMAIN-CONTAINING PROTEIN WLIM1-LIKE	coord: 1..92
None	No IPR available	PANTHER	PTHR24206:SF77	LIM DOMAIN-CONTAINING PROTEIN WLIM1-LIKE	coord: 117..214
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..92
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 3.54768E-40 score: 130.277
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 139..199 e-value: 3.71448E-37 score: 122.579
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 3..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 165..204
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 131..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0006871.4	IVF0006871.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding