IVF0006604 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGCCTTTCTTAATTCAGTGGATAACATATGTTGGAAATCCGTTTTGACAGGATGGGAATCGCCTTCTGTTAAAGATGTTGCTAGCAAAACTACTCCGAAGCGTGAGATTACCCGGACAAAGGAGGAAGATGAAGAATTGTTTGGAAATTCGAAGGCTCTAAATGCATTGTTCAATGGTGTGGACCATAATGTCTTCAAGCTTATTAACGCATGTACCTCAGCAAAAGAAGGCTAG ATGATTGCCTTTCTTAATTCAGTGGATAACATATGTTGGAAATCCGTTTTGACAGGATGGGAATCGCCTTCTGTTAAAGATGTTGCTAGCAAAACTACTCCGAAGCGTGAGATTACCCGGACAAAGGAGGAAGATGAAGAATTGTTTGGAAATTCGAAGGCTCTAAATGCATTGTTCAATGGTGTGGACCATAATGTCTTCAAGCTTATTAACGCATGTACCTCAGCAAAAGAAGGCTAG ATGATTGCCTTTCTTAATTCAGTGGATAACATATGTTGGAAATCCGTTTTGACAGGATGGGAATCGCCTTCTGTTAAAGATGTTGCTAGCAAAACTACTCCGAAGCGTGAGATTACCCGGACAAAGGAGGAAGATGAAGAATTGTTTGGAAATTCGAAGGCTCTAAATGCATTGTTCAATGGTGTGGACCATAATGTCTTCAAGCTTATTAACGCATGTACCTCAGCAAAAGAAGGCTAG MIAFLNSVDNICWKSVLTGWESPSVKDVASKTTPKREITRTKEEDEELFGNSKALNALFNGVDHNVFKLINACTSAKEG Homology
BLAST of IVF0006604 vs. ExPASy TrEMBL
Match: A0A5A7VAY3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001490 PE=4 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 7.0e-37 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of IVF0006604 vs. ExPASy TrEMBL
Match: A0A5D3CDY8 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold404G00030 PE=4 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22 Identity = 57/78 (73.08%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of IVF0006604 vs. ExPASy TrEMBL
Match: A0A5D3C137 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00680 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.4e-21 Identity = 57/71 (80.28%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of IVF0006604 vs. ExPASy TrEMBL
Match: A0A5D3BG63 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold369G00170 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.0e-19 Identity = 53/78 (67.95%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of IVF0006604 vs. ExPASy TrEMBL
Match: A0A5A7SVY3 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00220 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.5e-18 Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 0
BLAST of IVF0006604 vs. NCBI nr
Match: KAA0065462.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 160 bits (405), Expect = 1.65e-49 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of IVF0006604 vs. NCBI nr
Match: KAA0038855.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK09428.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 8.86e-29 Identity = 57/78 (73.08%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of IVF0006604 vs. NCBI nr
Match: KAA0047417.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK04126.1 gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 107 bits (268), Expect = 1.71e-26 Identity = 57/71 (80.28%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of IVF0006604 vs. NCBI nr
Match: TYJ98064.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 102 bits (253), Expect = 8.59e-24 Identity = 53/78 (67.95%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of IVF0006604 vs. NCBI nr
Match: KAA0035422.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa] >TYK25729.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 1.52e-23 Identity = 47/78 (60.26%), Postives = 61/78 (78.21%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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