IVF0006361 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACTTAGGCATGAAGGAAGCTCGACTCCACGACTTCCAGTTTTGAATGGATCGAATTATGCATTTTGGAAAGCTAGGATGATTGCCTTCTTAAAATCAATTGACAACAAGTCTTGGAAGACTATTATTACTAGGTATGAACATCCTATTGTGAAAGATGTTGATGGTAAGGTTACTCAAAAGCCAGAAATCTCTTGGTCAAATACAGAGGGTGAAGCCTCTCTTGAAAATTCTCGTGTTGAAATGGAATTTTAA ATGGAACTTAGGCATGAAGGAAGCTCGACTCCACGACTTCCAGTTTTGAATGGATCGAATTATGCATTTTGGAAAGCTAGGATGATTGCCTTCTTAAAATCAATTGACAACAAGTCTTGGAAGACTATTATTACTAGGTATGAACATCCTATTGTGAAAGATGTTGATGGTAAGGTTACTCAAAAGCCAGAAATCTCTTGGTCAAATACAGAGGGTGAAGCCTCTCTTGAAAATTCTCGTGTTGAAATGGAATTTTAA ATGGAACTTAGGCATGAAGGAAGCTCGACTCCACGACTTCCAGTTTTGAATGGATCGAATTATGCATTTTGGAAAGCTAGGATGATTGCCTTCTTAAAATCAATTGACAACAAGTCTTGGAAGACTATTATTACTAGGTATGAACATCCTATTGTGAAAGATGTTGATGGTAAGGTTACTCAAAAGCCAGAAATCTCTTGGTCAAATACAGAGGGTGAAGCCTCTCTTGAAAATTCTCGTGTTGAAATGGAATTTTAA MELRHEGSSTPRLPVLNGSNYAFWKARMIAFLKSIDNKSWKTIITRYEHPIVKDVDGKVTQKPEISWSNTEGEASLENSRVEMEF Homology
BLAST of IVF0006361 vs. ExPASy TrEMBL
Match: A0A5D3DD91 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00460 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.1e-18 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0
BLAST of IVF0006361 vs. ExPASy TrEMBL
Match: A0A5A7V2Z3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00860 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.1e-18 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0
BLAST of IVF0006361 vs. ExPASy TrEMBL
Match: A0A5A7TXB8 (Gag-proteinase polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001800 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.0e-18 Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 0
BLAST of IVF0006361 vs. ExPASy TrEMBL
Match: A0A5D3D4I7 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00050 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.7e-17 Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0
BLAST of IVF0006361 vs. ExPASy TrEMBL
Match: A0A5D3BKV1 (Receptor-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00170 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.6e-17 Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of IVF0006361 vs. NCBI nr
Match: TYK21554.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (249), Expect = 6.22e-24 Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of IVF0006361 vs. NCBI nr
Match: KAA0060245.1 (gag-pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (249), Expect = 6.94e-24 Identity = 49/77 (63.64%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of IVF0006361 vs. NCBI nr
Match: TYJ99644.1 (Receptor-like protein 12 [Cucumis melo var. makuwa]) HSP 1 Score: 94.7 bits (234), Expect = 2.54e-23 Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 0
BLAST of IVF0006361 vs. NCBI nr
Match: KAA0046626.1 (gag-proteinase polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 99.0 bits (245), Expect = 8.95e-23 Identity = 46/76 (60.53%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of IVF0006361 vs. NCBI nr
Match: KAA0054815.1 (Receptor-like protein 12 [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 2.08e-22 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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