IVF0006166 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCTCGGCTCGAACAAGTATCGCGGCTCGGCTTGGACAGGGATTGTGGCTCGGCTTGGCAGCGATTGTGGCTCGGCTTGGCAGCGATCTCGGCTCGGCTTGGACAGCCGACTTGGAGCCGGGTCGGGTTGGACGAAGAAAATGGTAGCCGCGGTTTCGAGGGTCCTTTCTTCCGGCGAACGACGGCGGTACGAAGGCCGATGGCTTGCCCTCTCGTCGATGCTGGTTTGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCGTGGACGGCTGTCACTGTGGCTTCCGTCGGTGAGTGCGGATGGAGAGAGACGGCGGTCGTCGAAGGCGCACGGACGGAAGAAGAAAAGAATGAGGAGGAAGAGATGGGCTGCTGGCGGTTGGAGGCGGAACGGAATGGATGGAGGACGAAGAGAAAAAAATGGGTGGCGGCGCGCGGTGGAGAGGAGAAAACGGAAGAGAGAAAAATCGATGGGGGGGGGGGGCGGCGCGGCTAGGGTTTCTTCTTCTTCTCTTTTTTTTTTTTTTTGTAAATTATATATATATATACATATAAACTTTAATAATTATAAACAATTAATAGTTTAA ATGGCGGCTCGGCTCGAACAAGTATCGCGGCTCGGCTTGGACAGGGATTGTGGCTCGGCTTGGCAGCGATTGTGGCTCGGCTTGGCAGCGATCTCGGCTCGGCTTGGACAGCCGACTTGGAGCCGGGTCGGGTTGGACGAAGAAAATGGTAGCCGCGGTTTCGAGGGTCCTTTCTTCCGGCGAACGACGGCGGTACGAAGGCCGATGGCTTGCCCTCTCGTCGATGCTGGTTTGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCGTGGACGGCTGTCACTGTGGCTTCCGTCGGTGAGTGCGGATGGAGAGAGACGGCGGTCGTCGAAGGCGCACGGACGGAAGAAGAAAAGAATGAGGAGGAAGAGATGGGCTGCTGGCGGTTGGAGGCGGAACGGAATGGATGGAGGACGAAGAGAAAAAAATGGGTGGCGGCGCGCGGTGGAGAGGAGAAAACGGAAGAGAGAAAAATCGATGGGGGGGGGGGGCGGCGCGGCTAGGGTTTCTTCTTCTTCTCTTTTTTTTTTTTTTTGTAAATTATATATATATATACATATAAACTTTAATAATTATAAACAATTAATAGTTTAA ATGGCGGCTCGGCTCGAACAAGTATCGCGGCTCGGCTTGGACAGGGATTGTGGCTCGGCTTGGCAGCGATTGTGGCTCGGCTTGGCAGCGATCTCGGCTCGGCTTGGACAGCCGACTTGGAGCCGGGTCGGGTTGGACGAAGAAAATGGTAGCCGCGGTTTCGAGGGTCCTTTCTTCCGGCGAACGACGGCGGTACGAAGGCCGATGGCTTGCCCTCTCGTCGATGCTGGTTTGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCGTGGACGGCTGTCACTGTGGCTTCCGTCGGTGAGTGCGGATGGAGAGAGACGGCGGTCGTCGAAGGCGCACGGACGGAAGAAGAAAAGAATGAGGAGGAAGAGATGGGCTGCTGGCGGTTGGAGGCGGAACGGAATGGATGGAGGACGAAGAGAAAAAAATGGGTGGCGGCGCGCGGTGGAGAGGAGAAAACGGAAGAGAGAAAAATCGATGGGGGGGGGGGGCGGCGCGGCTAGGGTTTCTTCTTCTTCTCTTTTTTTTTTTTTTTGTAAATTATATATATATATACATATAAACTTTAATAATTATAAACAATTAATAGTTTAA MAARLEQVSRLGLDRDCGSAWQRLWLGLAAISARLGQPTWSRVGLDEENGSRGFEGPFFRRTTAVRRPMACPLVDAGLVTADAAPPRQRRPMAGRARGTQKKDGRGRLSLWLPSVSADGERRRSSKAHGRKKKRMRRKRWAAGGWRRNGMDGGRREKNGWRRAVERRKRKREKSMGGGGGAARVSSSSLFFFFCKLYIYIHINFNNYKQLIV Homology
BLAST of IVF0006166 vs. ExPASy TrEMBL
Match: A0A5A7VN13 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001400 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 8.2e-08 Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of IVF0006166 vs. ExPASy TrEMBL
Match: A0A5A7VD11 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G002580 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.0e-07 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of IVF0006166 vs. ExPASy TrEMBL
Match: A0A5A7SMF0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00030 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.9e-05 Identity = 39/76 (51.32%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of IVF0006166 vs. ExPASy TrEMBL
Match: A0A5D3D2P4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002650 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 5.5e-04 Identity = 30/49 (61.22%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of IVF0006166 vs. NCBI nr
Match: KAA0067956.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 4.70e-10 Identity = 35/44 (79.55%), Postives = 38/44 (86.36%), Query Frame = 0
BLAST of IVF0006166 vs. NCBI nr
Match: KAA0066232.1 (transposase [Cucumis melo var. makuwa]) HSP 1 Score: 63.5 bits (153), Expect = 5.26e-09 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 0
BLAST of IVF0006166 vs. NCBI nr
Match: KAA0031930.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 3.15e-06 Identity = 39/76 (51.32%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of IVF0006166 vs. NCBI nr
Match: TYK17960.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 3.80e-05 Identity = 33/55 (60.00%), Postives = 34/55 (61.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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