IVF0005944 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTTCGAGCAACGAGATAGTAAGAATTTAATCGATGTGTGGACGAGATTTAAAAGGAAGGTCAAGAGATGCCCTCACCATTGCATCCTTGAATGCGTTTTGATGGAGCAGTTCTATTTTGGGCTGAGTGAGGATACACAACAATCTGCTGACACTATGTTTACAGGTATGATGTTGAGATCATTATACAACCAGATCAAGAATGCATTGGATGTTATGGCCAGAAATAGTTAG ATGACCTTCGAGCAACGAGATAGTAAGAATTTAATCGATGTGTGGACGAGATTTAAAAGGAAGGTCAAGAGATGCCCTCACCATTGCATCCTTGAATGCGTTTTGATGGAGCAGTTCTATTTTGGGCTGAGTGAGGATACACAACAATCTGCTGACACTATGTTTACAGGTATGATGTTGAGATCATTATACAACCAGATCAAGAATGCATTGGATGTTATGGCCAGAAATAGTTAG ATGACCTTCGAGCAACGAGATAGTAAGAATTTAATCGATGTGTGGACGAGATTTAAAAGGAAGGTCAAGAGATGCCCTCACCATTGCATCCTTGAATGCGTTTTGATGGAGCAGTTCTATTTTGGGCTGAGTGAGGATACACAACAATCTGCTGACACTATGTTTACAGGTATGATGTTGAGATCATTATACAACCAGATCAAGAATGCATTGGATGTTATGGCCAGAAATAGTTAG MTFEQRDSKNLIDVWTRFKRKVKRCPHHCILECVLMEQFYFGLSEDTQQSADTMFTGMMLRSLYNQIKNALDVMARNS Homology
BLAST of IVF0005944 vs. ExPASy TrEMBL
Match: A0A5D3D677 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold368G00040 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.8e-27 Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of IVF0005944 vs. ExPASy TrEMBL
Match: A0A5D3CC26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00270 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of IVF0005944 vs. ExPASy TrEMBL
Match: A0A0A0K6F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307410 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18 Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of IVF0005944 vs. ExPASy TrEMBL
Match: A0A5A7V1F3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002850 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.2e-18 Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 0
BLAST of IVF0005944 vs. ExPASy TrEMBL
Match: A0A5D3DEY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold494G00470 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.5e-18 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of IVF0005944 vs. NCBI nr
Match: KAA0049658.1 (uncharacterized protein E6C27_scaffold163G001290 [Cucumis melo var. makuwa] >TYK19035.1 uncharacterized protein E5676_scaffold368G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 130 bits (326), Expect = 6.76e-36 Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of IVF0005944 vs. NCBI nr
Match: KAA0048713.1 (hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa] >TYK07916.1 hypothetical protein E5676_scaffold265G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 129 bits (324), Expect = 6.73e-34 Identity = 61/78 (78.21%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of IVF0005944 vs. NCBI nr
Match: TYK21909.1 (hypothetical protein E5676_scaffold494G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 3.56e-25 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of IVF0005944 vs. NCBI nr
Match: KGN44484.1 (hypothetical protein Csa_015918 [Cucumis sativus]) HSP 1 Score: 100 bits (250), Expect = 7.40e-25 Identity = 49/78 (62.82%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of IVF0005944 vs. NCBI nr
Match: KAA0041115.1 (hypothetical protein E6C27_scaffold128G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 1.69e-23 Identity = 44/74 (59.46%), Postives = 54/74 (72.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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