Homology
BLAST of IVF0003022 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 295.0 bits (754), Expect = 2.0e-78
Identity = 180/496 (36.29%), Postives = 275/496 (55.44%), Query Frame = 0
Query: 190 CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYV 249
C+ CL GK + F L+LV+SD+CGPM ++ GG +YF+TF DD SR +V
Sbjct: 457 CDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWV 516
Query: 250 YLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAP 309
Y+++ K + + F+++ A VE + + +K RSD GGEY +F+ Y I + + P
Sbjct: 517 YILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVP 576
Query: 310 GTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLK 369
GTPQ NGV ER NRT+++ V SM+ A LP SF G AVQ Y++N PS ++ EIP +
Sbjct: 577 GTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPER 636
Query: 370 LWIGHKGSLRHFRIWGCQ--AHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKD--- 429
+W + S H +++GC+ AHV + KL+ +S C+F+GY + + Y L D
Sbjct: 637 VWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGD---EEFGYRLWDPVK 696
Query: 430 NKVFVSTNATFLEEDHIREYKPRSKIVLNEL---------------SNEST--ELSTRVV 489
KV S + F E +R S+ V N + S EST E+S +
Sbjct: 697 KKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGE 756
Query: 490 EEPSTLARVVHVSSSIRIRQPKSLGEP-----RRSGRVTNLPIHYMSLTETLTVISDGNI 549
+ + + + + + + GE RRS R Y S TE + + D
Sbjct: 757 QPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPS-TEYVLISDD--- 816
Query: 550 GDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGAD 609
+P + K+ + +K++ +KAM E+ES+ N + LV+ P G +P+ CKW++K K+ D
Sbjct: 817 REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGD 876
Query: 610 GKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTIL 658
K+ +KARLV KG+ Q +G+D+++IFS V + SIR +LS+AA D E+ Q+ VKT L
Sbjct: 877 CKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFL 936
BLAST of IVF0003022 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 213.4 bits (542), Expect = 7.8e-54
Identity = 160/574 (27.87%), Postives = 251/574 (43.73%), Query Frame = 0
Query: 186 SLPVCESCLEGKMTKRPF---TGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDD 245
S +CE CL GK + PF K HI K PL +VHSD+CGP+ YF+ F D
Sbjct: 451 SCEICEPCLNGKQARLPFKQLKDKTHI-KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQ 510
Query: 246 YSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEI 305
++ Y YL+++KS+ F+++ A+ E + + D G EY+ + + + ++ I
Sbjct: 511 FTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGI 570
Query: 306 VSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSI 365
L+ P TPQ NGV ER RT+ + +M+S A L SF G AV Y++N +PS+++
Sbjct: 571 SYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRAL 630
Query: 366 ---SEIPLKLWIGHKGSLRHFRIWGCQAHV-LETNPKKLEPRSKLCLFVGY-PKGTR--- 425
S+ P ++W K L+H R++G +V ++ K + +S +FVGY P G +
Sbjct: 631 VDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYEPNGFKLWD 690
Query: 426 --DGYFYGLKD---------NKVFVSTNATFLEEDHIREYK----PRSKIVLNELSNEST 485
+ F +D N V FL++ E K KI+ E NES
Sbjct: 691 AVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESK 750
Query: 486 E-------------------------LSTRVVEEPSTLARVVHVSSS------------- 545
E + T E + + S
Sbjct: 751 ECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKK 810
Query: 546 ----IRIRQPKSLGEP------------------------------RRSGRVTNLP-IHY 605
+ + K G P RRS R+ P I Y
Sbjct: 811 RKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISY 870
Query: 606 MSLTETL--TVISDGNIGD--PLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQP 657
+L V++ I + P +F + DK W +A+N EL + N W + +P
Sbjct: 871 NEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRP 930
BLAST of IVF0003022 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 1.6e-46
Identity = 151/596 (25.34%), Postives = 245/596 (41.11%), Query Frame = 0
Query: 190 CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYV 249
C CL K K PF+ S PLE ++SD+ + + Y++ F D ++RY ++
Sbjct: 500 CSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWL 559
Query: 250 YLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAP 309
Y ++ KS+ E F +K +EN+ I TF SD GGE++ L Y + I S P
Sbjct: 560 YPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHGISHLTSPP 619
Query: 310 GTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLK 369
TP+ NG+ ER++R +++ +++S+A +P ++ YA VY++N +P+ + E P +
Sbjct: 620 HTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQ 679
Query: 370 LWIGHKGSLRHFRIWGCQAH--VLETNPKKLEPRSKLCLFVGYPKGTRDGYF-YGLKDNK 429
G + R++GC + + N KL+ +S+ C+F+GY T+ Y L+ ++
Sbjct: 680 KLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSL-TQSAYLCLHLQTSR 739
Query: 430 VFVSTNATFLEE-----------DHIREYKPRSKIV------------------------ 489
+++S + F E ++E + S V
Sbjct: 740 LYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHH 799
Query: 490 ------------------------------------------------------LNELSN 549
S+
Sbjct: 800 AATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSS 859
Query: 550 ESTELSTRVVEEPSTLARVVHVSS-----------------------SIRIRQPKSLGEP 609
++T + E PS LA+ + + SI I P L +
Sbjct: 860 QNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQI 919
Query: 610 RRSGRVTNLPIHYMSLTETLTVI----------SDGNIGDPLTFKKAMEDVDKDEWIKAM 659
+ L H M +I S +P T +A++D + W AM
Sbjct: 920 VNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKD---ERWRNAM 979
BLAST of IVF0003022 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 185.3 bits (469), Expect = 2.3e-45
Identity = 154/618 (24.92%), Postives = 256/618 (41.42%), Query Frame = 0
Query: 182 VRRNSLPV---------CESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARGG 241
+ +SLPV C C K K PF+ S +PLE ++SD+ +
Sbjct: 462 ISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDN 521
Query: 242 FEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLK 301
+ Y++ F D ++RY ++Y ++ KS+ + F +K+ VEN+ I T SD GGE++ L+
Sbjct: 522 YRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR 581
Query: 302 FQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVY 361
+YL + I S P TP+ NG+ ER++R +++M +++S+A +P ++ YA VY
Sbjct: 582 --DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVY 641
Query: 362 ILNCVPSKSIS-EIPLKLWIGHKGSLRHFRIWGCQAH--VLETNPKKLEPRSKLCLFVGY 421
++N +P+ + + P + G + +++GC + + N KLE +SK C F+GY
Sbjct: 642 LINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGY 701
Query: 422 PKGTRDGYF-YGLKDNKVFVSTNATFLEE------------------------------- 481
T+ Y + +++ S + F E
Sbjct: 702 SL-TQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTL 761
Query: 482 --------------DHIREYKPR-----SKIVLNELSNE---STELSTRVVEEPSTLAR- 541
H+ + PR S + ++S+ S+ +S+ EP+ +
Sbjct: 762 PTTPLVLPAPPCLGPHL-DTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHN 821
Query: 542 ------VVHVSSSIRIRQP---------KSLGEPRRSGRVTNLPIHYMSLTETLTVISDG 601
H + + P S P ++ + PI + T IS+
Sbjct: 822 GPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEP 881
Query: 602 NI---------------------------------------------------------- 659
N
Sbjct: 882 NSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAAN 941
BLAST of IVF0003022 vs. ExPASy Swiss-Prot
Match:
Q12490 (Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY1B-BL PE=1 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 1.9e-15
Identity = 53/176 (30.11%), Postives = 89/176 (50.57%), Query Frame = 0
Query: 190 CESCLEGKMTK-RPFTG---KGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSR 249
C CL GK TK R G K S EP + +H+D+ GP++ + YFI+FTD+ ++
Sbjct: 637 CPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTK 696
Query: 250 YGYVYLMQHKSE--ALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIV 309
+ +VY + + E L+ F A ++N+ ++ + DRG EY + +L + I
Sbjct: 697 FRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGIT 756
Query: 310 SQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPS 360
+ + +GV ER NRTLLD + + + LPN A++ + + N + S
Sbjct: 757 PCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLAS 812
BLAST of IVF0003022 vs. ExPASy TrEMBL
Match:
A0A5D3BDY3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00250 PE=4 SV=1)
HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 610/702 (86.89%), Postives = 614/702 (87.46%), Query Frame = 0
Query: 40 SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE- 99
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE
Sbjct: 5 SLVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREH 64
Query: 100 --------------------------IMDSLQEI---------------GSTSGTKSVPS 159
I++SL E GSTSGTKSVPS
Sbjct: 65 VLNMMVHFNVVGMNGAVIDEASRVSFILESLPESFLQFRSKAVMNKFHRGSTSGTKSVPS 124
Query: 160 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 219
SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Sbjct: 125 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 184
Query: 220 QEWASKR-----------------------------------VRRNSLPVCESCLEGKMT 279
Q +KR + NSLPVCESCLEGKMT
Sbjct: 185 QVTQNKRLNISPEENAHLWHLRLGHMNLNRIEKLVKNGLLSELEENSLPVCESCLEGKMT 244
Query: 280 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 339
KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Sbjct: 245 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 304
Query: 340 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 399
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE
Sbjct: 305 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 364
Query: 400 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 459
RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH
Sbjct: 365 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 424
Query: 460 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 519
FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH
Sbjct: 425 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 484
Query: 520 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 579
IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV
Sbjct: 485 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 544
Query: 580 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 639
TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Sbjct: 545 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 604
Query: 640 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 662
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI
Sbjct: 605 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 664
BLAST of IVF0003022 vs. ExPASy TrEMBL
Match:
A0A5A7SWF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00290 PE=4 SV=1)
HSP 1 Score: 1180.6 bits (3053), Expect = 0.0e+00
Identity = 610/702 (86.89%), Postives = 614/702 (87.46%), Query Frame = 0
Query: 40 SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE- 99
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE
Sbjct: 5 SLVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREH 64
Query: 100 --------------------------IMDSLQEI---------------GSTSGTKSVPS 159
I++SL E GSTSGTKSVPS
Sbjct: 65 VLNMMVHFNVVGMNGAVIDEASRVSFILESLPESFLQFRSKAVMNKFHRGSTSGTKSVPS 124
Query: 160 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 219
SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Sbjct: 125 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 184
Query: 220 QEWASKR-----------------------------------VRRNSLPVCESCLEGKMT 279
Q +KR + NSLPVCESCLEGKMT
Sbjct: 185 QVTQNKRLNISPEENAHLWHLRLGHMNLNRIEKLVKNGLLSELEENSLPVCESCLEGKMT 244
Query: 280 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 339
KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Sbjct: 245 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 304
Query: 340 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 399
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE
Sbjct: 305 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 364
Query: 400 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 459
RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH
Sbjct: 365 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 424
Query: 460 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 519
FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH
Sbjct: 425 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 484
Query: 520 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 579
IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV
Sbjct: 485 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 544
Query: 580 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 639
TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Sbjct: 545 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 604
Query: 640 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 662
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI
Sbjct: 605 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 664
BLAST of IVF0003022 vs. ExPASy TrEMBL
Match:
A0A5D3BHG7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G00150 PE=4 SV=1)
HSP 1 Score: 1053.9 bits (2724), Expect = 2.8e-304
Identity = 550/702 (78.35%), Postives = 567/702 (80.77%), Query Frame = 0
Query: 42 VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQ 101
V+E QVP ANAT+TVRE YERWAK NEK RAYILASLSEVL KKHESMLTAREIMDSLQ
Sbjct: 40 VEECPQVPAANATQTVREPYERWAKGNEKGRAYILASLSEVLAKKHESMLTAREIMDSLQ 99
Query: 102 EI---------------------------------------------------------- 161
E+
Sbjct: 100 EMFGQASYQINHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQGQKGE 159
Query: 162 ------------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICF 221
GSTSGTKS+PSSSGNKKWKKKKGGQGNKAN A AKT KK+KA KGICF
Sbjct: 160 ANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKSKATKGICF 219
Query: 222 HCNQEGHWKRNCPKYLAEKKKAKQEWAS-KRVRR------------NSLPVCESCLEGKM 281
H NQEGHWKRNCPKYLAEKKKAKQ + R+ R NSLP+CESCLEGKM
Sbjct: 220 HYNQEGHWKRNCPKYLAEKKKAKQGHINLNRIERLVKNGILSELEENSLPICESCLEGKM 279
Query: 282 TKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEA 341
TKRPFTGKGH +KEPLELVHSDLCGPMN KARG FEYFITFTDDYSRYGYVYLMQHKSEA
Sbjct: 280 TKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEA 339
Query: 342 LEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVL 401
LEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECEI+SQLSAPGTPQQNGV
Sbjct: 340 LEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGVS 399
Query: 402 ERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLR 461
ERRNRTLLDMV SM+SYAHLPNSF GYAVQ VYILNCVPSKS+SE PLKLW G KGSLR
Sbjct: 400 ERRNRTLLDMVRSMISYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLR 459
Query: 462 HFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEED 521
HFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKVFVSTNATFLEED
Sbjct: 460 HFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEED 519
Query: 522 HIREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGR 581
HIRE+KPRSKIVLNELS E+TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGR
Sbjct: 520 HIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGR 579
Query: 582 VTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDL 641
VTNLPI YMSLTETLTVISDG+I DPLTFKKAMEDVDKDEWIKAMNLELESMYFN VWDL
Sbjct: 580 VTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDL 639
Query: 642 VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIR 661
VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIR
Sbjct: 640 VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIR 699
BLAST of IVF0003022 vs. ExPASy TrEMBL
Match:
A0A5A7SNP8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002160 PE=4 SV=1)
HSP 1 Score: 1019.6 bits (2635), Expect = 5.8e-294
Identity = 543/734 (73.98%), Postives = 555/734 (75.61%), Query Frame = 0
Query: 42 VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQ 101
V++ QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQ
Sbjct: 102 VEDCPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQ 161
Query: 102 EI---------------------------------------------------------- 161
E+
Sbjct: 162 EMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFIL 221
Query: 162 ---------------------------------------------------------GST 221
GST
Sbjct: 222 ESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGST 281
Query: 222 SGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKY 281
SGTKS+PSSSGNKKWKKKKGGQGNKAN A AKT KKAKAAKGICF CNQEGHWKRNCPKY
Sbjct: 282 SGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKY 341
Query: 282 LAEKKKAKQEWASKRVRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMN 341
LA+KKKAKQ GKMTKRPFTGKGH +KEPLELVHSDLCGPMN
Sbjct: 342 LAKKKKAKQ--------------------GKMTKRPFTGKGHRAKEPLELVHSDLCGPMN 401
Query: 342 AKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGG 401
KARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGG
Sbjct: 402 VKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGG 461
Query: 402 EYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYA 461
EYMDLKFQNYLMEC IVSQLSAP TPQQNGV ERRNRTLLDMV SMMSYAHLPNSF GYA
Sbjct: 462 EYMDLKFQNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYA 521
Query: 462 VQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLF 521
VQ VYILNCVPSKS+SE PLKLW GHKGSLRHFRIWGC AHVLE NPKKLEPRSKLCLF
Sbjct: 522 VQTAVYILNCVPSKSVSETPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLF 581
Query: 522 VGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNESTELSTRVV 581
VGYPKGTR GYFY KDNKVFVSTNATFLEEDHIRE+KPRSKIVLNELS E+TE STRVV
Sbjct: 582 VGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVV 641
Query: 582 EEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLT 641
EEPS L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLT
Sbjct: 642 EEPSALIRVVHVRSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLT 701
Query: 642 FKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQT 661
FKKAMEDVDKDEWIKAMNLELESMYFN VWDLVDQPDGVKPIGCKWIYKRKRGADGKVQT
Sbjct: 702 FKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQT 761
BLAST of IVF0003022 vs. ExPASy TrEMBL
Match:
A0A5A7V4M1 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00930 PE=4 SV=1)
HSP 1 Score: 989.2 bits (2556), Expect = 8.4e-285
Identity = 561/917 (61.18%), Postives = 573/917 (62.49%), Query Frame = 0
Query: 42 VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQ 101
VKE QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQ
Sbjct: 157 VKECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQ 216
Query: 102 EI---------------------------------------------------------- 161
E+
Sbjct: 217 EMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFIL 276
Query: 162 ---------------------------------------------------------GST 221
GST
Sbjct: 277 ESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGST 336
Query: 222 SGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKY 281
SGTKS+PSSSGNKKWKKKKGGQGNKAN A AKT KKAKAAKGICFHCNQEGHWKRNCPKY
Sbjct: 337 SGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKY 396
Query: 282 LAEKKKAKQ--------------------------------------EW----------- 341
LAEKKKAKQ W
Sbjct: 397 LAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMR 456
Query: 342 ------------------------------------------------------------ 401
Sbjct: 457 VGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVF 516
Query: 402 ---------------------------------------ASKRVR--------------- 461
+KR++
Sbjct: 517 IYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLG 576
Query: 462 --------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCG 521
NSLPVCESCLEGKMTKRPFTGKGH +KEPLELVHSDLCG
Sbjct: 577 HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCG 636
Query: 522 PMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSD 581
PMN KARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSD
Sbjct: 637 PMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSD 696
Query: 582 RGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFR 641
RGGEYMDLKFQNYLMEC IVSQLSAPGTPQQNGV ERRNRTLLDMV SMMSYAHLPNSF
Sbjct: 697 RGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFW 756
Query: 642 GYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKL 661
GYAVQ VYILNCVPSKS+SE PLKLW G KGSLRHFRIWGC AHVLE NPKKLEPRSKL
Sbjct: 757 GYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKL 816
BLAST of IVF0003022 vs. NCBI nr
Match:
TYJ96675.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1173 bits (3035), Expect = 0.0
Identity = 610/702 (86.89%), Postives = 614/702 (87.46%), Query Frame = 0
Query: 40 SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE- 99
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE
Sbjct: 5 SLVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREH 64
Query: 100 --------------------------IMDSLQEI---------------GSTSGTKSVPS 159
I++SL E GSTSGTKSVPS
Sbjct: 65 VLNMMVHFNVVGMNGAVIDEASRVSFILESLPESFLQFRSKAVMNKFHRGSTSGTKSVPS 124
Query: 160 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 219
SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Sbjct: 125 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 184
Query: 220 QEWASKRVR-----------------------------------RNSLPVCESCLEGKMT 279
Q +KR+ NSLPVCESCLEGKMT
Sbjct: 185 QVTQNKRLNISPEENAHLWHLRLGHMNLNRIEKLVKNGLLSELEENSLPVCESCLEGKMT 244
Query: 280 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 339
KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Sbjct: 245 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 304
Query: 340 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 399
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE
Sbjct: 305 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 364
Query: 400 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 459
RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH
Sbjct: 365 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 424
Query: 460 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 519
FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH
Sbjct: 425 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 484
Query: 520 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 579
IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV
Sbjct: 485 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 544
Query: 580 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 639
TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Sbjct: 545 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 604
Query: 640 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 661
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI
Sbjct: 605 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 664
BLAST of IVF0003022 vs. NCBI nr
Match:
KAA0034863.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1173 bits (3035), Expect = 0.0
Identity = 610/702 (86.89%), Postives = 614/702 (87.46%), Query Frame = 0
Query: 40 SRVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA---RE- 99
S VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTA RE
Sbjct: 5 SLVKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAPSVREH 64
Query: 100 --------------------------IMDSLQEI---------------GSTSGTKSVPS 159
I++SL E GSTSGTKSVPS
Sbjct: 65 VLNMMVHFNVVGMNGAVIDEASRVSFILESLPESFLQFRSKAVMNKFHRGSTSGTKSVPS 124
Query: 160 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 219
SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK
Sbjct: 125 SSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKKKAK 184
Query: 220 QEWASKRVR-----------------------------------RNSLPVCESCLEGKMT 279
Q +KR+ NSLPVCESCLEGKMT
Sbjct: 185 QVTQNKRLNISPEENAHLWHLRLGHMNLNRIEKLVKNGLLSELEENSLPVCESCLEGKMT 244
Query: 280 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 339
KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL
Sbjct: 245 KRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEAL 304
Query: 340 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 399
EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE
Sbjct: 305 EKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLE 364
Query: 400 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 459
RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH
Sbjct: 365 RRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRH 424
Query: 460 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 519
FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH
Sbjct: 425 FRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEEDH 484
Query: 520 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 579
IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV
Sbjct: 485 IREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGRV 544
Query: 580 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 639
TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV
Sbjct: 545 TNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLV 604
Query: 640 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 661
DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI
Sbjct: 605 DQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRI 664
BLAST of IVF0003022 vs. NCBI nr
Match:
TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1046 bits (2706), Expect = 0.0
Identity = 550/702 (78.35%), Postives = 567/702 (80.77%), Query Frame = 0
Query: 42 VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQ 101
V+E QVP ANAT+TVRE YERWAK NEK RAYILASLSEVL KKHESMLTAREIMDSLQ
Sbjct: 40 VEECPQVPAANATQTVREPYERWAKGNEKGRAYILASLSEVLAKKHESMLTAREIMDSLQ 99
Query: 102 EI---------------------------------------------------------- 161
E+
Sbjct: 100 EMFGQASYQINHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQGQKGE 159
Query: 162 ------------GSTSGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICF 221
GSTSGTKS+PSSSGNKKWKKKKGGQGNKAN A AKT KK+KA KGICF
Sbjct: 160 ANVATSTRKFHRGSTSGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKSKATKGICF 219
Query: 222 HCNQEGHWKRNCPKYLAEKKKAKQEWAS-KRVRR------------NSLPVCESCLEGKM 281
H NQEGHWKRNCPKYLAEKKKAKQ + R+ R NSLP+CESCLEGKM
Sbjct: 220 HYNQEGHWKRNCPKYLAEKKKAKQGHINLNRIERLVKNGILSELEENSLPICESCLEGKM 279
Query: 282 TKRPFTGKGHISKEPLELVHSDLCGPMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEA 341
TKRPFTGKGH +KEPLELVHSDLCGPMN KARG FEYFITFTDDYSRYGYVYLMQHKSEA
Sbjct: 280 TKRPFTGKGHRAKEPLELVHSDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEA 339
Query: 342 LEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVL 401
LEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDLKFQNYLMECEI+SQLSAPGTPQQNGV
Sbjct: 340 LEKFKEYKAEVENALSKTIKTFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGVS 399
Query: 402 ERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLR 461
ERRNRTLLDMV SM+SYAHLPNSF GYAVQ VYILNCVPSKS+SE PLKLW G KGSLR
Sbjct: 400 ERRNRTLLDMVRSMISYAHLPNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLR 459
Query: 462 HFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPKGTRDGYFYGLKDNKVFVSTNATFLEED 521
HFRIWGC AHVLE NPKKLEPRSKLCLFVGYPKGTR GYFY KDNKVFVSTNATFLEED
Sbjct: 460 HFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEED 519
Query: 522 HIREYKPRSKIVLNELSNESTELSTRVVEEPSTLARVVHVSSSIRIRQPKSLGEPRRSGR 581
HIRE+KPRSKIVLNELS E+TE STRVVEEPS L RVVHV SS R QP+SL EPRRSGR
Sbjct: 520 HIREHKPRSKIVLNELSKETTEPSTRVVEEPSALTRVVHVGSSTRTHQPQSLREPRRSGR 579
Query: 582 VTNLPIHYMSLTETLTVISDGNIGDPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDL 641
VTNLPI YMSLTETLTVISDG+I DPLTFKKAMEDVDKDEWIKAMNLELESMYFN VWDL
Sbjct: 580 VTNLPIRYMSLTETLTVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDL 639
Query: 642 VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIR 660
VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYE+ FS VAMLKSIR
Sbjct: 640 VDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSPVAMLKSIR 699
BLAST of IVF0003022 vs. NCBI nr
Match:
KAA0026233.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 1012 bits (2617), Expect = 0.0
Identity = 542/729 (74.35%), Postives = 552/729 (75.72%), Query Frame = 0
Query: 47 QVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQEI--- 106
QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQE+
Sbjct: 107 QVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQ 166
Query: 107 ------------------------------------------------------------ 166
Sbjct: 167 ASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAVMNEAVIDEASQVSFILESLPE 226
Query: 167 ----------------------------------------------------GSTSGTKS 226
GSTSGTKS
Sbjct: 227 SFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGSTSGTKS 286
Query: 227 VPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKYLAEKK 286
+PSSSGNKKWKKKKGGQGNKAN A AKT KKAKAAKGICF CNQEGHWKRNCPKYLA+KK
Sbjct: 287 MPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFLCNQEGHWKRNCPKYLAKKK 346
Query: 287 KAKQEWASKRVRRNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCGPMNAKARG 346
KAKQ GKMTKRPFTGKGH +KEPLELVHSDLCGPMN KARG
Sbjct: 347 KAKQ--------------------GKMTKRPFTGKGHRAKEPLELVHSDLCGPMNVKARG 406
Query: 347 GFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSDRGGEYMDL 406
GFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSDRGGEYMDL
Sbjct: 407 GFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSDRGGEYMDL 466
Query: 407 KFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFRGYAVQATV 466
KFQNYLMEC IVSQLSAP TPQQNGV ERRNRTLLDMV SMMSYAHLPNSF GYAVQ V
Sbjct: 467 KFQNYLMECGIVSQLSAPDTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFWGYAVQTAV 526
Query: 467 YILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKLCLFVGYPK 526
YILNCVPSKS+SE PLKLW GHKGSLRHFRIWGC AHVLE NPKKLEPRSKLCLFVGYPK
Sbjct: 527 YILNCVPSKSVSETPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 586
Query: 527 GTRDGYFYGLKDNKVFVSTNATFLEEDHIREYKPRSKIVLNELSNESTELSTRVVEEPST 586
GTR GYFY KDNKVFVSTNATFLEEDHIRE+KPRSKIVLNELS E+TE STRVVEEPS
Sbjct: 587 GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 646
Query: 587 LARVVHVSSSIRIRQPKSLGEPRRSGRVTNLPIHYMSLTETLTVISDGNIGDPLTFKKAM 646
L RVVHV SS R QP+SL EPRRSGRVTNLPI YMSLTETLTVISDG+I DPLTFKKAM
Sbjct: 647 LIRVVHVRSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 706
Query: 647 EDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 660
EDVDKDEWIKAMNLELESMYFN VWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 707 EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 766
BLAST of IVF0003022 vs. NCBI nr
Match:
KAA0062993.1 (gag/pol protein [Cucumis melo var. makuwa])
HSP 1 Score: 982 bits (2538), Expect = 0.0
Identity = 561/917 (61.18%), Postives = 573/917 (62.49%), Query Frame = 0
Query: 42 VKEYLQVPTANATRTVREAYERWAKANEKARAYILASLSEVLTKKHESMLTAREIMDSLQ 101
VKE QVP ANATRTVRE YERWAKANEKARAYILASLSEVL KKHESMLTAREIMDSLQ
Sbjct: 157 VKECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLAKKHESMLTAREIMDSLQ 216
Query: 102 EI---------------------------------------------------------- 161
E+
Sbjct: 217 EMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQVSFIL 276
Query: 162 ---------------------------------------------------------GST 221
GST
Sbjct: 277 ESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQKGEANVATSTRKFHRGST 336
Query: 222 SGTKSVPSSSGNKKWKKKKGGQGNKANPATAKTRKKAKAAKGICFHCNQEGHWKRNCPKY 281
SGTKS+PSSSGNKKWKKKKGGQGNKAN A AKT KKAKAAKGICFHCNQEGHWKRNCPKY
Sbjct: 337 SGTKSMPSSSGNKKWKKKKGGQGNKANLAAAKTTKKAKAAKGICFHCNQEGHWKRNCPKY 396
Query: 282 LAEKKKAKQ--------------------------------------EWA---------- 341
LAEKKKAKQ W
Sbjct: 397 LAEKKKAKQGKYDLLVLETCLVENDDSAWIIDSGATNHVCSSFQGISSWRQLETGEMTMR 456
Query: 342 ------------------------------------------------------------ 401
Sbjct: 457 VGTGHVVSAIAVGGLRLCLQKSFLLLENVYVVPDLKRNLISVKCLLEQSYSLTFNVNKVF 516
Query: 402 ----------------------------------------SKRVR--------------- 461
+KR++
Sbjct: 517 IYKNGVEICSAKLENNLYVLRSLTSKALLNTEMFKTAITQNKRLKISPKENAHLWHLRLG 576
Query: 462 --------------------RNSLPVCESCLEGKMTKRPFTGKGHISKEPLELVHSDLCG 521
NSLPVCESCLEGKMTKRPFTGKGH +KEPLELVHSDLCG
Sbjct: 577 HINLNRIERLVKNGLLSELEENSLPVCESCLEGKMTKRPFTGKGHRAKEPLELVHSDLCG 636
Query: 522 PMNAKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENKLSKTIKTFRSD 581
PMN KARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVEN LSKTIKTFRSD
Sbjct: 637 PMNVKARGGFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIKTFRSD 696
Query: 582 RGGEYMDLKFQNYLMECEIVSQLSAPGTPQQNGVLERRNRTLLDMVWSMMSYAHLPNSFR 641
RGGEYMDLKFQNYLMEC IVSQLSAPGTPQQNGV ERRNRTLLDMV SMMSYAHLPNSF
Sbjct: 697 RGGEYMDLKFQNYLMECGIVSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAHLPNSFW 756
Query: 642 GYAVQATVYILNCVPSKSISEIPLKLWIGHKGSLRHFRIWGCQAHVLETNPKKLEPRSKL 660
GYAVQ VYILNCVPSKS+SE PLKLW G KGSLRHFRIWGC AHVLE NPKKLEPRSKL
Sbjct: 757 GYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKL 816
BLAST of IVF0003022 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 119.8 bits (299), Expect = 8.4e-27
Identity = 55/135 (40.74%), Postives = 88/135 (65.19%), Query Frame = 0
Query: 523 DPLTFKKAMEDVDKDEWIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADG 582
+P T+ +A E + W AM+ E+ +M W++ P KPIGCKW+YK K +DG
Sbjct: 85 EPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 144
Query: 583 KVQTFKARLVAKGYTQVEGVDYEKIFSSVAMLKSIRILLSIAAYFDYEIWQMYVKTTILN 642
++ +KARLVAKGYTQ EG+D+ + FS V L S++++L+I+A +++ + Q+ + LN
Sbjct: 145 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 204
Query: 643 DNLEETIYMQQPEGF 658
+L+E IYM+ P G+
Sbjct: 205 GDLDEEIYMKLPPGY 216
BLAST of IVF0003022 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 75.5 bits (184), Expect = 1.8e-13
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 539 WIKAMNLELESMYFNLVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQ 598
W +AM EL+++ N W LV P +GCKW++K K +DG + KARLVAKG+ Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 599 VEGVDYEKIFSSVAMLKSIRILLSIA 625
EG+ + + +S V +IR +L++A
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of IVF0003022 vs. TAIR 10
Match:
ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 54.7 bits (130), Expect = 3.3e-07
Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 322 NRTLLDMVWSMMSYAHLPNSFRGYAVQATVYILNCVPSKSIS-EIPLKLWIGHKGSLRHF 381
NRT+++ V SM+ LP +FR A V+I+N PS +I+ +P ++W + +
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 382 RIWGCQAHVLETNPKKLEPRSK 403
R +GC A++ + KL+PR+K
Sbjct: 62 RRFGCVAYI-HCDEGKLKPRAK 82
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 2.0e-78 | 36.29 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 7.8e-54 | 27.87 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 1.6e-46 | 25.34 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.3e-45 | 24.92 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q12490 | 1.9e-15 | 30.11 | Transposon Ty1-BL Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 2... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BDY3 | 0.0e+00 | 86.89 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G0025... | [more] |
A0A5A7SWF4 | 0.0e+00 | 86.89 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G0029... | [more] |
A0A5D3BHG7 | 2.8e-304 | 78.35 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G0015... | [more] |
A0A5A7SNP8 | 5.8e-294 | 73.98 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00216... | [more] |
A0A5A7V4M1 | 8.4e-285 | 61.18 | Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G0093... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 8.4e-27 | 40.74 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 1.8e-13 | 40.70 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00710.1 | 3.3e-07 | 34.15 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |