IVF0003012 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAAGGACAAAGAAATGGAATCAAATGTTGCTATCACAGAGAAAGAATTAGTGAGAGGATCATCCTCTAAGACTAGAGTTGGACCTTCACTTATGAAAAATAAGAGAAAGGGGAAGACTCCCATGAATAGTAAGGGAAAGAATGTTGCTAAAGGTAAATGTTACCACTGCAACGAGGATGGACATTGGTTAAGAAATTGCCCAAAGTACCTTGCTGAGAAGAAAGCTGAGAAGGAAGCACAAGAAAACTAG ATGAGTAAGGACAAAGAAATGGAATCAAATGTTGCTATCACAGAGAAAGAATTAGTGAGAGGATCATCCTCTAAGACTAGAGTTGGACCTTCACTTATGAAAAATAAGAGAAAGGGGAAGACTCCCATGAATAGTAAGGGAAAGAATGTTGCTAAAGGTAAATGTTACCACTGCAACGAGGATGGACATTGGTTAAGAAATTGCCCAAAGTACCTTGCTGAGAAGAAAGCTGAGAAGGAAGCACAAGAAAACTAG ATGAGTAAGGACAAAGAAATGGAATCAAATGTTGCTATCACAGAGAAAGAATTAGTGAGAGGATCATCCTCTAAGACTAGAGTTGGACCTTCACTTATGAAAAATAAGAGAAAGGGGAAGACTCCCATGAATAGTAAGGGAAAGAATGTTGCTAAAGGTAAATGTTACCACTGCAACGAGGATGGACATTGGTTAAGAAATTGCCCAAAGTACCTTGCTGAGAAGAAAGCTGAGAAGGAAGCACAAGAAAACTAG MSKDKEMESNVAITEKELVRGSSSKTRVGPSLMKNKRKGKTPMNSKGKNVAKGKCYHCNEDGHWLRNCPKYLAEKKAEKEAQEN Homology
BLAST of IVF0003012 vs. ExPASy TrEMBL
Match: A0A5A7TXW7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold688G00290 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 7.9e-39 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of IVF0003012 vs. ExPASy TrEMBL
Match: A0A5D3E1U5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001090 PE=4 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 1.5e-29 Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of IVF0003012 vs. ExPASy TrEMBL
Match: A0A5A7T0L9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00290 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 7.5e-29 Identity = 67/82 (81.71%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of IVF0003012 vs. ExPASy TrEMBL
Match: A0A5A7TUI5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00480 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 9.7e-29 Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of IVF0003012 vs. ExPASy TrEMBL
Match: A0A5D3BYQ2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00100 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.7e-28 Identity = 67/84 (79.76%), Postives = 71/84 (84.52%), Query Frame = 0
BLAST of IVF0003012 vs. NCBI nr
Match: KAA0046201.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK14168.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 167 bits (424), Expect = 2.94e-50 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of IVF0003012 vs. NCBI nr
Match: TYK29862.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 137 bits (344), Expect = 6.52e-39 Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of IVF0003012 vs. NCBI nr
Match: KAA0045181.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK27371.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (337), Expect = 2.51e-38 Identity = 68/82 (82.93%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of IVF0003012 vs. NCBI nr
Match: KAA0035756.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (338), Expect = 5.31e-38 Identity = 67/82 (81.71%), Postives = 72/82 (87.80%), Query Frame = 0
BLAST of IVF0003012 vs. NCBI nr
Match: TYK04285.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 133 bits (335), Expect = 2.33e-37 Identity = 67/84 (79.76%), Postives = 71/84 (84.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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