IVF0002275 (gene) Melon (IVF77) v1

Overview


Name	IVF0002275
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ulp1-like peptidase
Location	chr04: 6024974 .. 6025377 (+)
RNA-Seq Expression	IVF0002275
Synteny	IVF0002275

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGTTTATATACCTTGATTAGGTTCTCGACATCCCTTCTACGGAAGGTTACGAGGATACCCCCAAAGCTCCTCTTAGAGAAGATGACGCTCCCCTTCCTATCCACATGGCCAACGTTCATTCAACTTCTCACCCATCGTCAACCTCCACTACCTACCCATCCTCGTGAGCCTGAGGATAACCCTAGGGGCTTTCCTTTGGACAATCGTGACCCTTTTGGACTTGTCCGAAGCTAGCTGAATCGAAAGCGAGTACGGGCCACTTTGACTCCAAGCTTGACGATATGAAGTTGAAGTTGGATCGCATGGACTCGAGATTGGATCACATGGAGTCCTCCTTTACAGCCGAGTTATCTACCATAAAGGAGTTGTCGATAGTTTTAGTCGCGTATGTTGTGTAA

mRNA sequence

ATGAGGAGTTTATATACCTTGATTAGGTTCTCGACATCCCTTCTACGGAAGGTTACGAGGATACCCCCAAAGCTCCTCTTAGAGAAGATGACGCTCCCCTTCCTATCCACATGGCCAACGTTCATTCAACTTCTCACCCATCGTCAACCTCCACTACCTACCCATCCTCGTGAGCCTGAGGATAACCCTAGGGGCTTTCCTTTGGACAATCCTGAATCGAAAGCGAGTACGGGCCACTTTGACTCCAAGCTTGACGATATGAAGTTGAAGTTGGATCGCATGGACTCGAGATTGGATCACATGGAGTCCTCCTTTACAGCCGAGTTATCTACCATAAAGGAGTTGTCGATAGTTTTAGTCGCGTATGTTGTGTAA

Coding sequence (CDS)

ATGAGGAGTTTATATACCTTGATTAGGTTCTCGACATCCCTTCTACGGAAGGTTACGAGGATACCCCCAAAGCTCCTCTTAGAGAAGATGACGCTCCCCTTCCTATCCACATGGCCAACGTTCATTCAACTTCTCACCCATCGTCAACCTCCACTACCTACCCATCCTCGTGAGCCTGAGGATAACCCTAGGGGCTTTCCTTTGGACAATCCTGAATCGAAAGCGAGTACGGGCCACTTTGACTCCAAGCTTGACGATATGAAGTTGAAGTTGGATCGCATGGACTCGAGATTGGATCACATGGAGTCCTCCTTTACAGCCGAGTTATCTACCATAAAGGAGTTGTCGATAGTTTTAGTCGCGTATGTTGTGTAA

Protein sequence

MRSLYTLIRFSTSLLRKVTRIPPKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPEDNPRGFPLDNPESKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAELSTIKELSIVLVAYVV

Homology

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BLAST of IVF0002275 vs. ExPASy TrEMBL
Match: A0A5A7U969 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2376G00080 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.1e-56
Identity = 123/134 (91.79%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 1   MRSLYTLIRFSTSLLRKVTRIPPKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPE 60
           MRSLYTLIRFSTSLLRKVTRIPPKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPE
Sbjct: 1   MRSLYTLIRFSTSLLRKVTRIPPKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPE 60

Query: 61  DNPRGFPLDN----------PESKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAELS 120
           DNPRGFPLDN           ESKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAELS
Sbjct: 61  DNPRGFPLDNRDPFWTCPKLAESKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAELS 120

Query: 121 TIKELSIVLVAYVV 125
           TIKELSIVLVAYVV
Sbjct: 121 TIKELSIVLVAYVV 134

[Close]

BLAST of IVF0002275 vs. ExPASy TrEMBL
Match: A0A5A7TSR5 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G00240 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 47/96 (48.96%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 23  PKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPEDNPRGFPLD-------NPE--- 82
           P   L+   LP        +Q L H QPP   HP E +DN +GF  D       +PE   
Sbjct: 162 PDAFLQDDALPSHPYGQHQLQFLAHHQPPPDAHPLEHKDNLKGFASDIGGPSSTHPEPAK 221

Query: 83  SKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAE 109
           ++AS GH DSKLDDM+LKLDRMD RLD MESSFT +
Sbjct: 222 AEASVGHSDSKLDDMELKLDRMDLRLDCMESSFTTK 257

[Close]

BLAST of IVF0002275 vs. ExPASy TrEMBL
Match: A0A5D3BDB5 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00700 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 47/96 (48.96%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 23  PKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPEDNPRGFPLD-------NPE--- 82
           P   L+   LP        +Q L H QPP   HP E +DN +GF  D       +PE   
Sbjct: 162 PDAFLQDDALPSHPYGQHQLQFLAHHQPPPDAHPLEHKDNLKGFASDIGGPSSTHPEPAK 221

Query: 83  SKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAE 109
           ++AS GH DSKLDDM+LKLDRMD RLD MESSFT +
Sbjct: 222 AEASVGHSDSKLDDMELKLDRMDLRLDCMESSFTTK 257

[Close]

BLAST of IVF0002275 vs. ExPASy TrEMBL
Match: A0A5A7T917 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001470 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.7e-08
Identity = 47/87 (54.02%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 42  IQLLTHRQPPLPTHPREPEDNPRGFPLD------NPESKASTG--HFDSKLDDMKLKLDR 101
           +Q     QP    HPR  EDN  GF  +       PE KA     HFDSK DDM+LKLD 
Sbjct: 26  LQFSAQCQPTPHAHPR--EDNTEGFASNISGLSTCPELKAEANMRHFDSKPDDMELKLDH 85

Query: 102 MDSRLDHMESSFTAELSTIKELSIVLV 121
           MDSR D MES FT ELSTI EL  VLV
Sbjct: 86  MDSRFDRMESFFTTELSTINELLTVLV 110

[Close]

BLAST of IVF0002275 vs. ExPASy TrEMBL
Match: A0A5A7SJV4 (Protein SPIRRIG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00490 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.4e-07
Identity = 44/90 (48.89%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 42  IQLLTHRQPPLPTHPREPEDNPRGFPLD--NPES------KASTGHFDSKLDDMKLKLDR 101
           IQ+   RQP L  HP   EDNP  F LD   P +      +AS GH D +LD+++ KL+ 
Sbjct: 114 IQVHGQRQPSLSVHPH--EDNPDAFALDIGGPSTCSELKVEASAGHLDFRLDNIEFKLNH 173

Query: 102 MDSRLDHMESSFTAELSTIKELSIVLVAYV 124
           MDSRLD ++ SFT ELS  K+L  VLVA V
Sbjct: 174 MDSRLDRVDFSFTVELSIKKKLVTVLVARV 201

[Close]

BLAST of IVF0002275 vs. NCBI nr
Match: KAA0051700.1 (hypothetical protein E6C27_scaffold60G00850 [Cucumis melo var. makuwa] >TYK31606.1 hypothetical protein E5676_scaffold2376G00080 [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (581), Expect = 8.55e-75
Identity = 123/134 (91.79%), Postives = 123/134 (91.79%), Query Frame = 0


Query: 1   MRSLYTLIRFSTSLLRKVTRIPPKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPE 60
           MRSLYTLIRFSTSLLRKVTRIPPKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPE
Sbjct: 1   MRSLYTLIRFSTSLLRKVTRIPPKLLLEKMTLPFLSTWPTFIQLLTHRQPPLPTHPREPE 60

Query: 61  DNPRGFPLDN----------PESKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAELS 120
           DNPRGFPLDN           ESKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAELS
Sbjct: 61  DNPRGFPLDNRDPFWTCPKLAESKASTGHFDSKLDDMKLKLDRMDSRLDHMESSFTAELS 120

Query: 121 TIKELSIVLVAYVV 124
           TIKELSIVLVAYVV
Sbjct: 121 TIKELSIVLVAYVV 134

[Close]

BLAST of IVF0002275 vs. NCBI nr
Match: TYJ97762.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.10e-12
Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 42  IQLLTHRQPPLPTHPREPEDNPRGFPLD-------NPE---SKASTGHFDSKLDDMKLKL 101
           +Q L H QPP   HP E +DN +GF  D       +PE   ++AS GH DSKLDDM+LKL
Sbjct: 181 LQFLAHHQPPPDAHPLEHKDNLKGFASDIGGPSSTHPEPAKAEASVGHSDSKLDDMELKL 240

Query: 102 DRMDSRLDHMESSFTAE 108
           DRMD RLD MESSFT +
Sbjct: 241 DRMDLRLDCMESSFTTK 257

[Close]

BLAST of IVF0002275 vs. NCBI nr
Match: KAA0046452.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 1.11e-12
Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 0


Query: 42  IQLLTHRQPPLPTHPREPEDNPRGFPLD-------NPE---SKASTGHFDSKLDDMKLKL 101
           +Q L H QPP   HP E +DN +GF  D       +PE   ++AS GH DSKLDDM+LKL
Sbjct: 181 LQFLAHHQPPPDAHPLEHKDNLKGFASDIGGPSSTHPEPAKAEASVGHSDSKLDDMELKL 240

Query: 102 DRMDSRLDHMESSFTAE 108
           DRMD RLD MESSFT +
Sbjct: 241 DRMDLRLDCMESSFTTK 257

[Close]

BLAST of IVF0002275 vs. NCBI nr
Match: KAA0037965.1 (hypothetical protein E6C27_scaffold36G001470 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 1.71e-11
Identity = 47/87 (54.02%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 42  IQLLTHRQPPLPTHPREPEDNPRGFPLDN------PESKASTG--HFDSKLDDMKLKLDR 101
           +Q     QP    HPRE  DN  GF  +       PE KA     HFDSK DDM+LKLD 
Sbjct: 26  LQFSAQCQPTPHAHPRE--DNTEGFASNISGLSTCPELKAEANMRHFDSKPDDMELKLDH 85

Query: 102 MDSRLDHMESSFTAELSTIKELSIVLV 120
           MDSR D MES FT ELSTI EL  VLV
Sbjct: 86  MDSRFDRMESFFTTELSTINELLTVLV 110

[Close]

BLAST of IVF0002275 vs. NCBI nr
Match: KAA0026076.1 (protein SPIRRIG [Cucumis melo var. makuwa] >TYJ96341.1 protein SPIRRIG [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 6.56e-10
Identity = 44/90 (48.89%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 42  IQLLTHRQPPLPTHPREPEDNPRGFPLD--NPES------KASTGHFDSKLDDMKLKLDR 101
           IQ+   RQP L  HP E  DNP  F LD   P +      +AS GH D +LD+++ KL+ 
Sbjct: 114 IQVHGQRQPSLSVHPHE--DNPDAFALDIGGPSTCSELKVEASAGHLDFRLDNIEFKLNH 173

Query: 102 MDSRLDHMESSFTAELSTIKELSIVLVAYV 123
           MDSRLD ++ SFT ELS  K+L  VLVA V
Sbjct: 174 MDSRLDRVDFSFTVELSIKKKLVTVLVARV 201

The following BLAST results are available for this feature:

BLAST of IVF0002275 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0002275 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U969	2.1e-56	91.79	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TSR5	1.1e-09	48.96	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold543G...	[more]
A0A5D3BDB5	1.1e-09	48.96	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251...	[more]
A0A5A7T917	3.7e-08	54.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7SJV4	2.4e-07	48.89	Protein SPIRRIG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G004...	[more]

BLAST of IVF0002275 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051700.1	8.55e-75	91.79	hypothetical protein E6C27_scaffold60G00850 [Cucumis melo var. makuwa] >TYK31606...	[more]
TYJ97762.1	1.10e-12	55.84	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0046452.1	1.11e-12	55.84	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0037965.1	1.71e-11	54.02	hypothetical protein E6C27_scaffold36G001470 [Cucumis melo var. makuwa]	[more]
KAA0026076.1	6.56e-10	48.89	protein SPIRRIG [Cucumis melo var. makuwa] >TYJ96341.1 protein SPIRRIG [Cucumis ...	[more]

BLAST of IVF0002275 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 84..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0002275.1	IVF0002275.1	mRNA