IVF0001072 (gene) Melon (IVF77) v1

Overview


Name	IVF0001072
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr04: 858603 .. 861020 (+)
RNA-Seq Expression	IVF0001072
Synteny	IVF0001072

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTTTTTGATACAAACACTGAAACCGCTTTACCAACTGTGACGGCCGGAATGACTGAGCGATAACCAATTTTTATGCTTCTTTTTTGGTCGCTATTTATGAATGAATCACAATCACTCTCTTCTTTGAAGAAAAGTTCAAACTTGGAACAACTCTCCCATGAAACTTATAACCTTCAACCATACCAAAAAGCATTCATTACTTTAATAAATTCCCCCACCAGCATCATCACCTCTTAGTCAACAAACTGTTTTTTTCCCAAAAGCAGAAAAAAAGAAAGAGATAAAATAAAGATAATCAAGAACAACATGTAAAAAAAAATAAATAAAGAAAAAGATAGATACTGAAAAACATGACTAACCATTTTCATTTACATCATCATCCTCTGCTCTGCTTTTCCACTCCCTTCTAACCCATTTTTCCATTGCAGGATTTATTGGAGTTGAGGAGTCCCACAATCTTTATGTTCTGTTCTGTTCTGTTTGTTTTTCCATCACTTTTTCAGGGCTGTTCAATTGGAGTTCTTCCATCTTCAGGTAATATTAATGTGTTTGTTTCTAAGATAATTCTTCTAGACACTTGTTTCTGTTGTCTCCATCCACCAACTGTTTGATGAAAGGCCGCATTGAATAATTTTGTGGGTTCTGGGGAAGCTTGTGATCTATGTGTTGTGGAATTTGTATAATTAGTTAGACATTAACCCATTTCTCTGGAGTTCTCTCCTGTTGCATTGTTGGGTTGATTGTAATTTGTAATAGTGTCTGGATTCTCCCTAAACATTGATGGGTTCAGGGTCGTATGGCAACCCTAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGTTTCTGCAGTGTATATTGTCCTCAATGGTGCTATATCATGTTTTCACCTCCACCACCCTTGGAGTTTCCAGATGATAATTCAGGCCCAAATTTTTCACCTCTTGTTATTGCAATTATTGGAATTCTGGCCAGTGCTCTCCTTCTTGTAACCTATTACACCATTATTTCAAAGTATTGTGGCAACACAAACCGTTTGTCTGGAACTGGAAACTATGACCCAAGTGAGGAATACGAAGATAATCACAACCCAACACTTCATGAGCCATGGCATGTTGCCACAACTGGCTTGGATGAAGCACTTATCAAGTCCATTACTGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTTAGTGAGTTTCAAGAAGATGAAAGCCTTAGATTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGCATTGATACATGGCTCAAATCACACTCCAATTGTCCCTTATGTCGTGCTAATATCATCTCTATCAATGCTGGTTCTCCAGTTCAACTCCCTGCAAGCACTGCATATCCCATAACTAATGAGACCGTGCCAGAGTCTTCTCAGGATAATGACCACGAGGCTGTTTCACTAGACTCTGGACAAAGTTTTAGCAATGAGGATGCAAAGAACTCCGTTCGCGCTTTCAGCGACCTCGGAAATCTGGAGAAAAGAGATACTACCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCAATTTCAATGGATCATTGCAGCCAAAACCGTCTTATTATTGCAGATGTTCTACGTCTAAATGAAGATGAATTTGGAGGTATTGATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCAAAACATTCTGTAGGAGAAGACAGTAGGTCAAGTCATAGAAAAAGAATCTTGCATTGTGTGATGAGTCCTGTTTCAATGAAGAGATCATTTTCAAGTGGAAGACTTTCTCTCACCAAGCATGGGAGAGAACACAGGGGAATTGCTCCTGTCTCATATTTTACAACACAGAATCAGAATGATTTGCAGTTTTGATGAGAAAAAAAAAACACAACAGAGGATTTTACGAGATGAACATATACCATGTGAGTTCTTTAGCTGCTTTCAATGATTTCCCTTTATGGTTGGTTATTGGTTTTAGTGAAAGAAAAGATCACCCATGGCTTTTGCTTTATCATTCAACTGTCACAAATATGTCTGATGCATCAGTATGTTTCTTCTTCCATCAATTATTTGACTGCCTTTGCATTGCTTCTATGAAGATTATTACAAGATCTCTCTATTTCTCTCTCTAAACTTTCGAAGTAAATTACAACTGGCTTGAGGGATAATATTGGTAGAGAAGAAGACAGGAGAATTAATTAGAATACAGAATGATGTGTATAAAGAAACAAAAAATAAGAAAAGGATGATGATGAGAAGAAAGTAGCGATAATAAAACAAAATTGTGCATCGAATGGCACAATTTAAATAAACCCTTTTAGCTTCAGCTTTTTCTCTGTTCAATGCTAAAAAGTATATATGCATGTCATTTCTTTTTCCCAAT

mRNA sequence

TGCTTTTTGATACAAACACTGAAACCGCTTTACCAACTGTGACGGCCGGAATGACTGAGCGATAACCAATTTTTATGCTTCTTTTTTGGTCGCTATTTATGAATGAATCACAATCACTCTCTTCTTTGAAGAAAAGTTCAAACTTGGAACAACTCTCCCATGAAACTTATAACCTTCAACCATACCAAAAAGCATTCATTACTTTAATAAATTCCCCCACCAGCATCATCACCTCTTAGTCAACAAACTGTTTTTTTCCCAAAAGCAGAAAAAAAGAAAGAGATAAAATAAAGATAATCAAGAACAACATGTAAAAAAAAATAAATAAAGAAAAAGATAGATACTGAAAAACATGACTAACCATTTTCATTTACATCATCATCCTCTGCTCTGCTTTTCCACTCCCTTCTAACCCATTTTTCCATTGCAGGATTTATTGGAGTTGAGGAGTCCCACAATCTTTATGTTCTGTTCTGTTCTGTTTGTTTTTCCATCACTTTTTCAGGGCTGTTCAATTGGAGTTCTTCCATCTTCAGGTAATATTAATGTGTTTGTTTCTAAGATAATTCTTCTAGACACTTGTTTCTGTTGTCTCCATCCACCAACTGTTTGATGAAAGGCCGCATTGAATAATTTTGTGGGTTCTGGGGAAGCTTGTGATCTATGTGTTGTGGAATTTGTATAATTAGTTAGACATTAACCCATTTCTCTGGAGTTCTCTCCTGTTGCATTGTTGGGTTGATTGTAATTTGTAATAGTGTCTGGATTCTCCCTAAACATTGATGGGTTCAGGGTCGTATGGCAACCCTAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGTTTCTGCAGTGTATATTGTCCTCAATGGTGCTATATCATGTTTTCACCTCCACCACCCTTGGAGTTTCCAGATGATAATTCAGGCCCAAATTTTTCACCTCTTGTTATTGCAATTATTGGAATTCTGGCCAGTGCTCTCCTTCTTGTAACCTATTACACCATTATTTCAAAGTATTGTGGCAACACAAACCGTTTGTCTGGAACTGGAAACTATGACCCAAGTGAGGAATACGAAGATAATCACAACCCAACACTTCATGAGCCATGGCATGTTGCCACAACTGGCTTGGATGAAGCACTTATCAAGTCCATTACTGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTTAGTGAGTTTCAAGAAGATGAAAGCCTTAGATTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGCATTGATACATGGCTCAAATCACACTCCAATTGTCCCTTATGTCGTGCTAATATCATCTCTATCAATGCTGGTTCTCCAGTTCAACTCCCTGCAAGCACTGCATATCCCATAACTAATGAGACCGTGCCAGAGTCTTCTCAGGATAATGACCACGAGGCTGTTTCACTAGACTCTGGACAAAGTTTTAGCAATGAGGATGCAAAGAACTCCGTTCGCGCTTTCAGCGACCTCGGAAATCTGGAGAAAAGAGATACTACCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCAATTTCAATGGATCATTGCAGCCAAAACCGTCTTATTATTGCAGATGTTCTACGTCTAAATGAAGATGAATTTGGAGGTATTGATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCAAAACATTCTGTAGGAGAAGACAGTAGGTCAAGTCATAGAAAAAGAATCTTGCATTGTGTGATGAGTCCTGTTTCAATGAAGAGATCATTTTCAAGTGGAAGACTTTCTCTCACCAAGCATGGGAGAGAACACAGGGGAATTGCTCCTGTCTCATATTTTACAACACAGAATCAGAATGATTTGCAGTTTTGATGAGAAAAAAAAAACACAACAGAGGATTTTACGAGATGAACATATACCATGTGAGTTCTTTAGCTGCTTTCAATGATTTCCCTTTATGGTTGGTTATTGGTTTTAGTGAAAGAAAAGATCACCCATGGCTTTTGCTTTATCATTCAACTGTCACAAATATGTCTGATGCATCAGTATGTTTCTTCTTCCATCAATTATTTGACTGCCTTTGCATTGCTTCTATGAAGATTATTACAAGATCTCTCTATTTCTCTCTCTAAACTTTCGAAGTAAATTACAACTGGCTTGAGGGATAATATTGGTAGAGAAGAAGACAGGAGAATTAATTAGAATACAGAATGATGTGTATAAAGAAACAAAAAATAAGAAAAGGATGATGATGAGAAGAAAGTAGCGATAATAAAACAAAATTGTGCATCGAATGGCACAATTTAAATAAACCCTTTTAGCTTCAGCTTTTTCTCTGTTCAATGCTAAAAAGTATATATGCATGTCATTTCTTTTTCCCAAT

Coding sequence (CDS)

ATGGGTTCAGGGTCGTATGGCAACCCTAAAACTTGGATACCATATATGAGCAACAAAGATTGCTCTCAAGGTTTCTGCAGTGTATATTGTCCTCAATGGTGCTATATCATGTTTTCACCTCCACCACCCTTGGAGTTTCCAGATGATAATTCAGGCCCAAATTTTTCACCTCTTGTTATTGCAATTATTGGAATTCTGGCCAGTGCTCTCCTTCTTGTAACCTATTACACCATTATTTCAAAGTATTGTGGCAACACAAACCGTTTGTCTGGAACTGGAAACTATGACCCAAGTGAGGAATACGAAGATAATCACAACCCAACACTTCATGAGCCATGGCATGTTGCCACAACTGGCTTGGATGAAGCACTTATCAAGTCCATTACTGTTTGCAAGTACAAGAGAGGAGATGGGTTGGTTGAAGGCTCTGATTGCTCTGTTTGCCTTAGTGAGTTTCAAGAAGATGAAAGCCTTAGATTGTTGCCTAAATGCAGCCATGCTTTTCATCTTCAATGCATTGATACATGGCTCAAATCACACTCCAATTGTCCCTTATGTCGTGCTAATATCATCTCTATCAATGCTGGTTCTCCAGTTCAACTCCCTGCAAGCACTGCATATCCCATAACTAATGAGACCGTGCCAGAGTCTTCTCAGGATAATGACCACGAGGCTGTTTCACTAGACTCTGGACAAAGTTTTAGCAATGAGGATGCAAAGAACTCCGTTCGCGCTTTCAGCGACCTCGGAAATCTGGAGAAAAGAGATACTACCATTGAGCTTAGAGATGGAAGATTGCAGCAAATTAGAAGGTCAATTTCAATGGATCATTGCAGCCAAAACCGTCTTATTATTGCAGATGTTCTACGTCTAAATGAAGATGAATTTGGAGGTATTGATGAAGCAGGAAGTTCAGGTGATGTTGGATCATCAAAACATTCTGTAGGAGAAGACAGTAGGTCAAGTCATAGAAAAAGAATCTTGCATTGTGTGATGAGTCCTGTTTCAATGAAGAGATCATTTTCAAGTGGAAGACTTTCTCTCACCAAGCATGGGAGAGAACACAGGGGAATTGCTCCTGTCTCATATTTTACAACACAGAATCAGAATGATTTGCAGTTTTGA

Protein sequence

MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPVSYFTTQNQNDLQF

Homology

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BLAST of IVF0001072 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 266.9 bits (681), Expect = 3.4e-70
Identity = 168/375 (44.80%), Postives = 209/375 (55.73%), Query Frame = 0


Query: 12  WIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEF----PDDNSGPNFSPLVIAIIGILA 71
           W+PY   +DCSQG CS+YCPQWCY +F PPPP +      DD+SGP FSPLVIAIIG+LA
Sbjct: 8   WVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLA 67

Query: 72  SALLLVTYYTIISKYCGNTNRLSGT-----------GNYDPSEEYEDNHNPTLHEPWHVA 131
           SA LLV+YYT ISKYCG  + L G            G    S     +     HE W+V+
Sbjct: 68  SAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVS 127

Query: 132 -TTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDT 191
             +GLDE LI  ITVCKY+RGDG V  +DCSVCL EF + ESLRLLP+CSHAFH QCIDT
Sbjct: 128 PPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDT 187

Query: 192 WLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFS 251
           WLKSHSNCPLCRANI  +  G     P   A         E+  DN HE V +  G    
Sbjct: 188 WLKSHSNCPLCRANITFVTVGLASPEPEGCA-------PGETGGDNTHEVVVVMDGLENL 247

Query: 252 NEDAKNSVRAFSDLGN----------LEKRDTTIELRDGRLQQIRRSISMDHCSQNRLII 311
            E+ + +V   S   +          +E+ +   E+R+      R + S D    NR+ I
Sbjct: 248 CEEQQEAVSRASTADDDHDAKDVAEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCI 307

Query: 312 ADVLRLN-EDEFGGIDEAG-SSGDVGSSKHSVGEDSRS----SHRKRILHCVMSPVSMKR 354
           ADVL+ + EDE     E+G  +G  G+S+   GE+S+     S R   L   M  +  KR
Sbjct: 308 ADVLQESMEDELTAARESGLLAGGAGTSRRCHGENSKGRGGRSRRALQLQDAMEALPGKR 367

[Close]

BLAST of IVF0001072 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.1e-64
Identity = 154/327 (47.09%), Postives = 197/327 (60.24%), Query Frame = 0


Query: 8   NPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD---NSGPNFSPLVIAIIG 67
           NP  W PY S  DCSQG C++YCPQWCY++F PPPP  F DD   +S  +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 68  ILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPT--LHEPWHVATT--GL 127
           IL SAL+LV+YYT+ISKYC   ++ S       SE    NHN          ++T   GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSS------SETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 128 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 187
           +E++IKSITV KYK GDG V+GSDCSVCLSEF+E+ESLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 188 SNCPLCRANIISIN-----AGSPVQLPASTAYPITNETVPESSQDND---HEAVSLDSGQ 247
           SNCPLCRA +  +N      G  V +  +      ++T   S  + +   +E+ + D   
Sbjct: 184 SNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDS 243

Query: 248 SFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLN 307
               ED +   R       L+  +   E +D     IRRS+S++  S   + IADVLR  
Sbjct: 244 VVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLN--SGVVVSIADVLREI 303

Query: 308 EDEFGGIDEAGSSGDVGSS-KHSVGED 319
           E      DE G SG VG+S +   GED
Sbjct: 304 E------DEEGESGGVGTSQRREEGED 316

[Close]

BLAST of IVF0001072 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-62
Identity = 150/308 (48.70%), Postives = 189/308 (61.36%), Query Frame = 0


Query: 4   GSYGNPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMFSPPPP--LEFPDDNSGPNFSPLVI 63
           GS GNP  W   Y S +DCSQG CSVYCPQWCY++F PPP   L+  DD+S  +FSPL+I
Sbjct: 2   GSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLI 61

Query: 64  AIIGILASALLLVTYYTIISKYC----GNTNRLSGTGNYDPSEEY-----EDNHNPTLHE 123
           A+IGILASA +LV+YYT+ISKYC     N++  S       S +Y      +N+N     
Sbjct: 62  ALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATN 121

Query: 124 PWHV----ATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHA 183
           P          GLDE+LIKSITV KY++ DG VE SDCSVCLSEFQE+ESLRLLPKC+HA
Sbjct: 122 PNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHA 181

Query: 184 FHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVS 243
           FH+ CIDTWLKSHSNCPLCRA I++    S V++   T   I  E    S+ D+    V+
Sbjct: 182 FHVPCIDTWLKSHSNCPLCRAFIVT---SSAVEIVDLTNQQIVTENNSISTGDDSVVVVN 241

Query: 244 LDSGQSFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIAD 296
           LD   S S  +  N        G+  K     E++D R  + RRS S+ +     + IAD
Sbjct: 242 LDLENSRSRNETVNE-------GSTPKPP---EMQDSRDGEERRSASL-NSGGGVVSIAD 295

[Close]

BLAST of IVF0001072 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-50
Identity = 148/367 (40.33%), Postives = 186/367 (50.68%), Query Frame = 0


Query: 8   NPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMFSPPPPL--EFPDDN--SGPNFSPLVIAI 67
           NP  W  Y++ +DC+QG CS +CPQWC YI FSPPP    +F +D   S PN SPLVIAI
Sbjct: 6   NPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSPLVIAI 65

Query: 68  IGILASALLLVTYYTIISKYCGN--TNR-LSGTGNYD-----PSEEYEDNHNPTLHEPWH 127
            GI A+A LL  YYT++SKYC N  TN   S +G  D      S E  D  +P   E   
Sbjct: 66  FGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFALES-- 125

Query: 128 VATTGLDEALIKSITVCKYKRGDG--LVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQC 187
            +T GLD+ LIK I   K K+      + G+DCS+CL EF EDESLRLLPKC+H FH+ C
Sbjct: 126 -STAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVC 185

Query: 188 IDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQ 247
           ID WLKSHSNCPLCRA II                      VP + Q   H  V      
Sbjct: 186 IDRWLKSHSNCPLCRAKII----------------------VPTTQQPEHHVVV------ 245

Query: 248 SFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIAD-VLRL 307
                   N  R  S++G+ E         D   +++  SIS  H S      AD VLR+
Sbjct: 246 -------MNLDRFTSNVGSAEGNVVV----DDHREEVSVSISSHHPSW--FSAADIVLRI 305

Query: 308 NEDEFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKH 359
           + D   G +E G+             D  + +R+++       V +KRSFSSG L L   
Sbjct: 306 SRD---GEEEEGN------------YDLENGNREKL-------VDLKRSFSSGGLVLGTQ 306

[Close]

BLAST of IVF0001072 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-36
Identity = 101/284 (35.56%), Postives = 142/284 (50.00%), Query Frame = 0


Query: 20  DCSQGFCSVYCPQWCYIMFSPPPPL-----EFPDDNSGPNFSPL---------------- 79
           DCS G C   CP  CY    P P       + P  +S P  SP                 
Sbjct: 22  DCSNGVCDPICPYNCY----PEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSS 81

Query: 80  ----VIAIIGILASAL-LLVTYYTIISKYCGNTNRLSGTGNYDP---------SEEYEDN 139
                I+II I  + L +L+T + +++K+  ++      G Y            EE++D 
Sbjct: 82  SSLDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDR 141

Query: 140 HNPTLHEPWHVATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKC 199
                H  W + TTGL +++I SIT+C YKRGDGL+E +DC VCL+EF+EDESLRLLPKC
Sbjct: 142 EQVD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKC 201

Query: 200 SHAFHLQCIDTWLKSHSNCPLCRANIISINA-----GSPVQL-PASTAYPITNETVPESS 259
           +HAFH+ CIDTWL SH+NCPLCRA I  I+        PV++ P  +   + N+ V E  
Sbjct: 202 NHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEED 261

Query: 260 QDNDHEAVSLDSGQSFSNEDAKNSVRAFSDLGNLEKRDTTIELR 263
                  V  D  +S  + D +  +  F   G+  + +T   +R
Sbjct: 262 HGEIENRVDSDFKES-DDSDIRIEIYRFDSDGDGSETETKERVR 299

[Close]

BLAST of IVF0001072 vs. ExPASy TrEMBL
Match: A0A1S4E5H2 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 SV=1)

HSP 1 Score: 763.5 bits (1970), Expect = 4.2e-217
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60
           MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI
Sbjct: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60

Query: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120
           AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL
Sbjct: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180
           DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH
Sbjct: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180

Query: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240
           SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK
Sbjct: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240

Query: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300
           NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID
Sbjct: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300

Query: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360
           EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP
Sbjct: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360

Query: 361 VSYFTTQNQNDLQF 375
           VSYFTTQNQNDLQF
Sbjct: 361 VSYFTTQNQNDLQF 374

[Close]

BLAST of IVF0001072 vs. ExPASy TrEMBL
Match: A0A5D3E5F1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004560 PE=3 SV=1)

HSP 1 Score: 761.1 bits (1964), Expect = 2.1e-216
Identity = 373/374 (99.73%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60
           MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI
Sbjct: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60

Query: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120
           AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL
Sbjct: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180
           DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH
Sbjct: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180

Query: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240
           SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK
Sbjct: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240

Query: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300
           NSVRAFSDLGNLEKRDT IELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID
Sbjct: 241 NSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300

Query: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360
           EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP
Sbjct: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360

Query: 361 VSYFTTQNQNDLQF 375
           VSYFTTQNQNDLQF
Sbjct: 361 VSYFTTQNQNDLQF 374

[Close]

BLAST of IVF0001072 vs. ExPASy TrEMBL
Match: A0A0A0LH71 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE=3 SV=1)

HSP 1 Score: 726.9 bits (1875), Expect = 4.4e-206
Identity = 358/374 (95.72%), Postives = 364/374 (97.33%), Query Frame = 0


Query: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60
           MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFP DNSGP+FSPLVI
Sbjct: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFP-DNSGPHFSPLVI 60

Query: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120
           AIIGILASA LLVTYYTIISKYCGNTNRLSGTGN+DPSEEYEDNHNPT HEPWHVATTGL
Sbjct: 61  AIIGILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180
           DEALIKSITVCKYKR DGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH
Sbjct: 121 DEALIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180

Query: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240
           SNCPLCRANIISINAGSPVQLPASTAYPITNETVPE+SQDND+EAVSLDSGQSFSNED K
Sbjct: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGK 240

Query: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300
           NSVRAFSDLGNLEKRDT IELRDGRLQQIRRSISMDHCSQN +IIADVLRLNED+FGGID
Sbjct: 241 NSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGID 300

Query: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360
           EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP
Sbjct: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360

Query: 361 VSYFTTQNQNDLQF 375
           V  FTTQNQN LQF
Sbjct: 361 VPNFTTQNQNGLQF 373

[Close]

BLAST of IVF0001072 vs. ExPASy TrEMBL
Match: A0A6J1E013 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111026146 PE=3 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 3.8e-181
Identity = 312/365 (85.48%), Postives = 333/365 (91.23%), Query Frame = 0


Query: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD+SGPNFSPLVIAII
Sbjct: 93  GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAII 152

Query: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123
           GILASA LLV+YYTIISKYCGNTNRLS TGN+DP+EE+EDNHNPTLHEPWH+ATTGLDEA
Sbjct: 153 GILASAFLLVSYYTIISKYCGNTNRLSRTGNHDPNEEFEDNHNPTLHEPWHIATTGLDEA 212

Query: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183
           LIKSITVCKYKRGDGLVEGSDC+VCLSEFQEDESLRLLPKCSHAFHLQCIDTW KSHSNC
Sbjct: 213 LIKSITVCKYKRGDGLVEGSDCAVCLSEFQEDESLRLLPKCSHAFHLQCIDTWFKSHSNC 272

Query: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNED----- 243
           PLCRA I+S +A SP QLP STA PIT+E +PE+S   DH+AVS DSG+SF N+D     
Sbjct: 273 PLCRAYIVSFSASSPFQLPPSTAVPITSEAMPETSHTTDHDAVSQDSGRSFGNDDLMQAH 332

Query: 244 --AKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEF 303
             AKNS RA SDLGNLEKRDT IELRDGRLQQIRRSISMDHC QN  IIAD+L+LNED F
Sbjct: 333 NCAKNSFRALSDLGNLEKRDTVIELRDGRLQQIRRSISMDHCCQNHTIIADILQLNEDGF 392

Query: 304 GGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHR 362
           G IDE+GSSGDVGSSKHSVGEDS+SSHRKRILHCVMSPVSMKRSFSSGR SLT+HGREHR
Sbjct: 393 GAIDESGSSGDVGSSKHSVGEDSKSSHRKRILHCVMSPVSMKRSFSSGRFSLTRHGREHR 452

[Close]

BLAST of IVF0001072 vs. ExPASy TrEMBL
Match: A0A6J1K181 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491489 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 5.6e-177
Identity = 304/358 (84.92%), Postives = 328/358 (91.62%), Query Frame = 0


Query: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63
           GSYG PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD+SGPNFSPLVIAII
Sbjct: 2   GSYGTPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAII 61

Query: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123
           GILASA LL+TYYTIISKY GNT+RLS T ++DP++E+ED HNPTLHEPWHVATTGLDEA
Sbjct: 62  GILASAFLLITYYTIISKYYGNTSRLSRTQDHDPNQEFEDTHNPTLHEPWHVATTGLDEA 121

Query: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183
           LIK ITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC
Sbjct: 122 LIKCITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 181

Query: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAKNSV 243
           PLCRANI+S+ A SP+QLPA+T  P TNE +PE+SQ NDHE +S + G+SF N++AKNSV
Sbjct: 182 PLCRANIVSVTASSPLQLPATTGNPTTNEAIPETSQANDHEGISQEPGRSFGNDNAKNSV 241

Query: 244 RAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGIDEAG 303
           RAFSDLGNL KRD  IELRDGRLQQIRRSISMDHCSQN +IIA       DEFGGIDEAG
Sbjct: 242 RAFSDLGNLVKRDAVIELRDGRLQQIRRSISMDHCSQNHIIIA-------DEFGGIDEAG 301

Query: 304 SSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 362
           SSGDVGSSKHS+GEDS+S+HRKRILHCVMSPVSMKRSFSSGR SLTKHGREHRG+APV
Sbjct: 302 SSGDVGSSKHSMGEDSKSNHRKRILHCVMSPVSMKRSFSSGRFSLTKHGREHRGLAPV 352

[Close]

BLAST of IVF0001072 vs. NCBI nr
Match: XP_016903486.1 (PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis melo])

HSP 1 Score: 757 bits (1955), Expect = 4.41e-276
Identity = 374/374 (100.00%), Postives = 374/374 (100.00%), Query Frame = 0


Query: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60
           MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI
Sbjct: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60

Query: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120
           AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL
Sbjct: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180
           DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH
Sbjct: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180

Query: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240
           SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK
Sbjct: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240

Query: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300
           NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID
Sbjct: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300

Query: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360
           EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP
Sbjct: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360

Query: 361 VSYFTTQNQNDLQF 374
           VSYFTTQNQNDLQF
Sbjct: 361 VSYFTTQNQNDLQF 374

[Close]

BLAST of IVF0001072 vs. NCBI nr
Match: KAA0038569.1 (E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 755 bits (1949), Expect = 3.63e-275
Identity = 373/374 (99.73%), Postives = 373/374 (99.73%), Query Frame = 0


Query: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60
           MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI
Sbjct: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60

Query: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120
           AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL
Sbjct: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180
           DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH
Sbjct: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180

Query: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240
           SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK
Sbjct: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240

Query: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300
           NSVRAFSDLGNLEKRDT IELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID
Sbjct: 241 NSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300

Query: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360
           EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP
Sbjct: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360

Query: 361 VSYFTTQNQNDLQF 374
           VSYFTTQNQNDLQF
Sbjct: 361 VSYFTTQNQNDLQF 374

[Close]

BLAST of IVF0001072 vs. NCBI nr
Match: XP_011652647.1 (E3 ubiquitin-protein ligase Os04g0590900 [Cucumis sativus] >XP_031738210.1 E3 ubiquitin-protein ligase Os04g0590900 [Cucumis sativus] >KGN60374.1 hypothetical protein Csa_002397 [Cucumis sativus])

HSP 1 Score: 721 bits (1861), Expect = 9.07e-262
Identity = 358/374 (95.72%), Postives = 364/374 (97.33%), Query Frame = 0


Query: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60
           MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPD NSGP+FSPLVI
Sbjct: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPD-NSGPHFSPLVI 60

Query: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120
           AIIGILASA LLVTYYTIISKYCGNTNRLSGTGN+DPSEEYEDNHNPT HEPWHVATTGL
Sbjct: 61  AIIGILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTFHEPWHVATTGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180
           DEALIKSITVCKYKR DGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH
Sbjct: 121 DEALIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180

Query: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDAK 240
           SNCPLCRANIISINAGSPVQLPASTAYPITNETVPE+SQDND+EAVSLDSGQSFSNED K
Sbjct: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPETSQDNDYEAVSLDSGQSFSNEDGK 240

Query: 241 NSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEFGGID 300
           NSVRAFSDLGNLEKRDT IELRDGRLQQIRRSISMDHCSQN +IIADVLRLNED+FGGID
Sbjct: 241 NSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHIIIADVLRLNEDDFGGID 300

Query: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360
           EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP
Sbjct: 301 EAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAP 360

Query: 361 VSYFTTQNQNDLQF 374
           V  FTTQNQN LQF
Sbjct: 361 VPNFTTQNQNGLQF 373

[Close]

BLAST of IVF0001072 vs. NCBI nr
Match: XP_038887668.1 (E3 ubiquitin-protein ligase Os04g0590900-like [Benincasa hispida])

HSP 1 Score: 655 bits (1691), Expect = 6.05e-236
Identity = 322/368 (87.50%), Postives = 338/368 (91.85%), Query Frame = 0


Query: 1   MGSGSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVI 60
           MGSGSY +PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGP FSPL+I
Sbjct: 1   MGSGSYSSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPKFSPLII 60

Query: 61  AIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGL 120
           AIIGILASA LL++YYTIISKYCGNTNRLSGTGN+DPSEEYEDNHNPTLHEPWH+AT GL
Sbjct: 61  AIIGILASAFLLISYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPTLHEPWHIATAGL 120

Query: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180
           DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH
Sbjct: 121 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 180

Query: 181 SNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNEDA- 240
           SNCPLCRANI+SINA SP+QLP   A+PITNET+PE+SQ NDHEA S DSG+SF NEDA 
Sbjct: 181 SNCPLCRANIVSINATSPIQLPPRAAHPITNETMPETSQANDHEAASQDSGRSFRNEDAM 240

Query: 241 ------KNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNE 300
                 K+S+RA SDLGNLEKRDT IELRDGRLQQIRRSISMDHCSQN  IIADVLRLNE
Sbjct: 241 QGSNCAKSSIRALSDLGNLEKRDTIIELRDGRLQQIRRSISMDHCSQNHTIIADVLRLNE 300

Query: 301 DEFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGR 360
            EFG IDEAGSSGDVGSSKHS+GED RSSHR RIL CVMSPVSMKRSFSSGR S +KHGR
Sbjct: 301 HEFGDIDEAGSSGDVGSSKHSLGEDGRSSHRNRILQCVMSPVSMKRSFSSGRFSFSKHGR 360

[Close]

BLAST of IVF0001072 vs. NCBI nr
Match: XP_022159853.1 (RING-H2 finger protein ATL52-like isoform X1 [Momordica charantia])

HSP 1 Score: 637 bits (1643), Expect = 3.28e-227
Identity = 312/365 (85.48%), Postives = 333/365 (91.23%), Query Frame = 0


Query: 4   GSYGNPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDNSGPNFSPLVIAII 63
           GSYG+PKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD+SGPNFSPLVIAII
Sbjct: 93  GSYGSPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDDDSGPNFSPLVIAII 152

Query: 64  GILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPTLHEPWHVATTGLDEA 123
           GILASA LLV+YYTIISKYCGNTNRLS TGN+DP+EE+EDNHNPTLHEPWH+ATTGLDEA
Sbjct: 153 GILASAFLLVSYYTIISKYCGNTNRLSRTGNHDPNEEFEDNHNPTLHEPWHIATTGLDEA 212

Query: 124 LIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNC 183
           LIKSITVCKYKRGDGLVEGSDC+VCLSEFQEDESLRLLPKCSHAFHLQCIDTW KSHSNC
Sbjct: 213 LIKSITVCKYKRGDGLVEGSDCAVCLSEFQEDESLRLLPKCSHAFHLQCIDTWFKSHSNC 272

Query: 184 PLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQSFSNED----- 243
           PLCRA I+S +A SP QLP STA PIT+E +PE+S   DH+AVS DSG+SF N+D     
Sbjct: 273 PLCRAYIVSFSASSPFQLPPSTAVPITSEAMPETSHTTDHDAVSQDSGRSFGNDDLMQAH 332

Query: 244 --AKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLNEDEF 303
             AKNS RA SDLGNLEKRDT IELRDGRLQQIRRSISMDHC QN  IIAD+L+LNED F
Sbjct: 333 NCAKNSFRALSDLGNLEKRDTVIELRDGRLQQIRRSISMDHCCQNHTIIADILQLNEDGF 392

Query: 304 GGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHR 361
           G IDE+GSSGDVGSSKHSVGEDS+SSHRKRILHCVMSPVSMKRSFSSGR SLT+HGREHR
Sbjct: 393 GAIDESGSSGDVGSSKHSVGEDSKSSHRKRILHCVMSPVSMKRSFSSGRFSLTRHGREHR 452

[Close]

BLAST of IVF0001072 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 247.7 bits (631), Expect = 1.5e-65
Identity = 154/327 (47.09%), Postives = 197/327 (60.24%), Query Frame = 0


Query: 8   NPKTWIPYMSNKDCSQGFCSVYCPQWCYIMFSPPPPLEFPDD---NSGPNFSPLVIAIIG 67
           NP  W PY S  DCSQG C++YCPQWCY++F PPPP  F DD   +S  +FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 68  ILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSEEYEDNHNPT--LHEPWHVATT--GL 127
           IL SAL+LV+YYT+ISKYC   ++ S       SE    NHN          ++T   GL
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSS------SETLNLNHNGEGFFSSTQRISTNGDGL 123

Query: 128 DEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSH 187
           +E++IKSITV KYK GDG V+GSDCSVCLSEF+E+ESLRLLPKC+HAFHL CIDTWLKSH
Sbjct: 124 NESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSH 183

Query: 188 SNCPLCRANIISIN-----AGSPVQLPASTAYPITNETVPESSQDND---HEAVSLDSGQ 247
           SNCPLCRA +  +N      G  V +  +      ++T   S  + +   +E+ + D   
Sbjct: 184 SNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDS 243

Query: 248 SFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIADVLRLN 307
               ED +   R       L+  +   E +D     IRRS+S++  S   + IADVLR  
Sbjct: 244 VVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLN--SGVVVSIADVLREI 303

Query: 308 EDEFGGIDEAGSSGDVGSS-KHSVGED 319
           E      DE G SG VG+S +   GED
Sbjct: 304 E------DEEGESGGVGTSQRREEGED 316

[Close]

BLAST of IVF0001072 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-63
Identity = 150/308 (48.70%), Postives = 189/308 (61.36%), Query Frame = 0


Query: 4   GSYGNPKTW-IPYMSNKDCSQGFCSVYCPQWCYIMFSPPPP--LEFPDDNSGPNFSPLVI 63
           GS GNP  W   Y S +DCSQG CSVYCPQWCY++F PPP   L+  DD+S  +FSPL+I
Sbjct: 2   GSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLI 61

Query: 64  AIIGILASALLLVTYYTIISKYC----GNTNRLSGTGNYDPSEEY-----EDNHNPTLHE 123
           A+IGILASA +LV+YYT+ISKYC     N++  S       S +Y      +N+N     
Sbjct: 62  ALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATN 121

Query: 124 PWHV----ATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKCSHA 183
           P          GLDE+LIKSITV KY++ DG VE SDCSVCLSEFQE+ESLRLLPKC+HA
Sbjct: 122 PNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHA 181

Query: 184 FHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVS 243
           FH+ CIDTWLKSHSNCPLCRA I++    S V++   T   I  E    S+ D+    V+
Sbjct: 182 FHVPCIDTWLKSHSNCPLCRAFIVT---SSAVEIVDLTNQQIVTENNSISTGDDSVVVVN 241

Query: 244 LDSGQSFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIAD 296
           LD   S S  +  N        G+  K     E++D R  + RRS S+ +     + IAD
Sbjct: 242 LDLENSRSRNETVNE-------GSTPKPP---EMQDSRDGEERRSASL-NSGGGVVSIAD 295

[Close]

BLAST of IVF0001072 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 9.5e-52
Identity = 148/367 (40.33%), Postives = 186/367 (50.68%), Query Frame = 0


Query: 8   NPKTWIPYMSNKDCSQGFCSVYCPQWC-YIMFSPPPPL--EFPDDN--SGPNFSPLVIAI 67
           NP  W  Y++ +DC+QG CS +CPQWC YI FSPPP    +F +D   S PN SPLVIAI
Sbjct: 6   NPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSPLVIAI 65

Query: 68  IGILASALLLVTYYTIISKYCGN--TNR-LSGTGNYD-----PSEEYEDNHNPTLHEPWH 127
            GI A+A LL  YYT++SKYC N  TN   S +G  D      S E  D  +P   E   
Sbjct: 66  FGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFALES-- 125

Query: 128 VATTGLDEALIKSITVCKYKRGDG--LVEGSDCSVCLSEFQEDESLRLLPKCSHAFHLQC 187
            +T GLD+ LIK I   K K+      + G+DCS+CL EF EDESLRLLPKC+H FH+ C
Sbjct: 126 -STAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVC 185

Query: 188 IDTWLKSHSNCPLCRANIISINAGSPVQLPASTAYPITNETVPESSQDNDHEAVSLDSGQ 247
           ID WLKSHSNCPLCRA II                      VP + Q   H  V      
Sbjct: 186 IDRWLKSHSNCPLCRAKII----------------------VPTTQQPEHHVVV------ 245

Query: 248 SFSNEDAKNSVRAFSDLGNLEKRDTTIELRDGRLQQIRRSISMDHCSQNRLIIAD-VLRL 307
                   N  R  S++G+ E         D   +++  SIS  H S      AD VLR+
Sbjct: 246 -------MNLDRFTSNVGSAEGNVVV----DDHREEVSVSISSHHPSW--FSAADIVLRI 305

Query: 308 NEDEFGGIDEAGSSGDVGSSKHSVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKH 359
           + D   G +E G+             D  + +R+++       V +KRSFSSG L L   
Sbjct: 306 SRD---GEEEEGN------------YDLENGNREKL-------VDLKRSFSSGGLVLGTQ 306

[Close]

BLAST of IVF0001072 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 1.0e-37
Identity = 101/284 (35.56%), Postives = 142/284 (50.00%), Query Frame = 0


Query: 20  DCSQGFCSVYCPQWCYIMFSPPPPL-----EFPDDNSGPNFSPL---------------- 79
           DCS G C   CP  CY    P P       + P  +S P  SP                 
Sbjct: 22  DCSNGVCDPICPYNCY----PEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSS 81

Query: 80  ----VIAIIGILASAL-LLVTYYTIISKYCGNTNRLSGTGNYDP---------SEEYEDN 139
                I+II I  + L +L+T + +++K+  ++      G Y            EE++D 
Sbjct: 82  SSLDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDR 141

Query: 140 HNPTLHEPWHVATTGLDEALIKSITVCKYKRGDGLVEGSDCSVCLSEFQEDESLRLLPKC 199
                H  W + TTGL +++I SIT+C YKRGDGL+E +DC VCL+EF+EDESLRLLPKC
Sbjct: 142 EQVD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKC 201

Query: 200 SHAFHLQCIDTWLKSHSNCPLCRANIISINA-----GSPVQL-PASTAYPITNETVPESS 259
           +HAFH+ CIDTWL SH+NCPLCRA I  I+        PV++ P  +   + N+ V E  
Sbjct: 202 NHAFHISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEED 261

Query: 260 QDNDHEAVSLDSGQSFSNEDAKNSVRAFSDLGNLEKRDTTIELR 263
                  V  D  +S  + D +  +  F   G+  + +T   +R
Sbjct: 262 HGEIENRVDSDFKES-DDSDIRIEIYRFDSDGDGSETETKERVR 299

[Close]

BLAST of IVF0001072 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.6e-35
Identity = 112/354 (31.64%), Postives = 177/354 (50.00%), Query Frame = 0


Query: 40  PPPPLEFPDDNSGPNFSPLVIAIIGILASALLLVTYYTIISKYCGNTNRLSGTGNYDPSE 99
           PPPP+     ++G +F  L +A+IGILA+A LLV+YY  + K C N +R+   G +  S 
Sbjct: 19  PPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSR 78

Query: 100 EYEDNHNPTLHEPWHVATTGLDEALIKSITVCKYKR----GDGLVEG----------SDC 159
              ++ +P +     + + GLDE++I++I + K+K+     DG+  G           +C
Sbjct: 79  RRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQEC 138

Query: 160 SVCLSEFQEDESLRLLPKCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGSPVQLPAST 219
           SVCLSEFQ++E LR++P CSH FH+ CID WL++++NCPLCR  +    +  P ++ A +
Sbjct: 139 SVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPS 198

Query: 220 AYPITNETVPESSQDNDHEAVSLDS----------------GQSFS------NEDAKNSV 279
             P   E +     +N++  + L S                GQ  S      NE+ +NS+
Sbjct: 199 TSP---ENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSI 258

Query: 280 RAFS---DLGNLEKR-----------DTTIELRDGR------LQQIRRSISMDHCSQNRL 328
                  D G L ++           D  I++R G+      +Q IRRSISMD  +  +L
Sbjct: 259 SPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQL 318

The following BLAST results are available for this feature:

BLAST of IVF0001072 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XLY8	3.4e-70	44.80	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9LF64	2.1e-64	47.09	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	1.5e-62	48.70	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	1.3e-50	40.33	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q8LFY8	1.4e-36	35.56	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]

BLAST of IVF0001072 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E5H2	4.2e-217	100.00	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103503554 PE=3 ...	[more]
A0A5D3E5F1	2.1e-216	99.73	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0LH71	4.4e-206	95.72	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G901190 PE...	[more]
A0A6J1E013	3.8e-181	85.48	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11102614...	[more]
A0A6J1K181	5.6e-177	84.92	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111491489 P...	[more]

BLAST of IVF0001072 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903486.1	4.41e-276	100.00	PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis melo]	[more]
KAA0038569.1	3.63e-275	99.73	E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK31174.1 E3 ubiquitin-...	[more]
XP_011652647.1	9.07e-262	95.72	E3 ubiquitin-protein ligase Os04g0590900 [Cucumis sativus] >XP_031738210.1 E3 ub...	[more]
XP_038887668.1	6.05e-236	87.50	E3 ubiquitin-protein ligase Os04g0590900-like [Benincasa hispida]	[more]
XP_022159853.1	3.28e-227	85.48	RING-H2 finger protein ATL52-like isoform X1 [Momordica charantia]	[more]

BLAST of IVF0001072 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	1.5e-65	47.09	RING/U-box superfamily protein	[more]
AT3G03550.1	1.1e-63	48.70	RING/U-box superfamily protein	[more]
AT4G17905.1	9.5e-52	40.33	RING/U-box superfamily protein	[more]
AT1G72220.1	1.0e-37	35.56	RING/U-box superfamily protein	[more]
AT5G43420.1	1.6e-35	31.64	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 145..186 e-value: 9.5E-8 score: 41.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 144..187 e-value: 8.3E-14 score: 51.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 145..187 score: 13.020386
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 120..194 e-value: 8.2E-22 score: 78.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..237
None	No IPR available	PANTHER	PTHR45676:SF108	E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE	coord: 7..354
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 144..187 e-value: 2.25667E-17 score: 73.1131
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 139..193
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 7..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0001072.1	IVF0001072.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane