Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCAAGTGTATGGCATTGTAGCGCTCGTTGTGAGAGAAATGCTGCTGTCACGCTGGTGGAGTGTAACTCTTCAGTCTAAGTATGTGAATAAGGCAAGGCGCTGTTGGATATCCCAGGTAACTCGCTTGATACTGGCGAGAGCAAATCACAGGTCAGCGAGGGGAGATTCCCAAGTCTCAAATGAGCTTGCGATTGTGGTTGTTGTACTGGTTGGTAACTCACTACATGGTTATTGA
mRNA sequence
ATGATTCAAGTGTATGGCATTGTAGCGCTCGTTGTGAGAGAAATGCTGCTGTCACGCTGGTGGAGTGTAACTCTTCAGTCTAAGTATGTGAATAAGGCAAGGCGCTGTTGGATATCCCAGGTAACTCGCTTGATACTGGCGAGAGCAAATCACAGGTCAGCGAGGGGAGATTCCCAAGTCTCAAATGAGCTTGCGATTGTGGTTGTTGTACTGGTTGGTAACTCACTACATGGTTATTGA
Coding sequence (CDS)
ATGATTCAAGTGTATGGCATTGTAGCGCTCGTTGTGAGAGAAATGCTGCTGTCACGCTGGTGGAGTGTAACTCTTCAGTCTAAGTATGTGAATAAGGCAAGGCGCTGTTGGATATCCCAGGTAACTCGCTTGATACTGGCGAGAGCAAATCACAGGTCAGCGAGGGGAGATTCCCAAGTCTCAAATGAGCTTGCGATTGTGGTTGTTGTACTGGTTGGTAACTCACTACATGGTTATTGA
Protein sequence
MIQVYGIVALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDSQVSNELAIVVVVLVGNSLHGY
Homology
BLAST of IVF0000899 vs. ExPASy TrEMBL
Match:
A0A0A0KBJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178440 PE=4 SV=1)
HSP 1 Score: 94.4 bits (233), Expect = 2.3e-16
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0
Query: 2 IQVYGIVALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDSQVS 61
I YG+VALV R+ML++RWWSVT++SK VN ARRCWISQVTR+ILA+ N SA G+ S
Sbjct: 7 IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKS 66
Query: 62 N-ELAIVVVVLVGN 75
ELAIV+VVLVGN
Sbjct: 67 QYELAIVIVVLVGN 80
BLAST of IVF0000899 vs. ExPASy TrEMBL
Match:
A0A5D3C7R8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001840 PE=4 SV=1)
HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query: 9 ALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDS 59
ALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHR + ++
Sbjct: 19 ALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRLSSNEA 68
BLAST of IVF0000899 vs. ExPASy TrEMBL
Match:
A0A5A7SKT6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G003290 PE=4 SV=1)
HSP 1 Score: 76.6 bits (187), Expect = 5.0e-11
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0
Query: 1 MIQVYGIVALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHR 53
MI VYG+VALVVR+ L+ RWWSVTL SK VN RRC ISQVT +ILARANHR
Sbjct: 1 MIPVYGVVALVVRKKLVRRWWSVTLGSKKVNVVRRCLISQVTHMILARANHR 52
BLAST of IVF0000899 vs. ExPASy TrEMBL
Match:
A0A5D3D1M5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001430 PE=4 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 8.6e-11
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0
Query: 8 VALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDSQVSNELAIV 67
+ LVV ML+ WWSVT +SK +N ARRCWISQVTR +L RAN +S RGDS+VS I
Sbjct: 23 ILLVVGTMLMRCWWSVTSRSKNMNMARRCWISQVTREVLTRANPKSVRGDSRVSKSCGI- 82
Query: 68 VVVLVGNSLHGY 80
G+SL+ Y
Sbjct: 83 ----AGDSLNNY 89
BLAST of IVF0000899 vs. ExPASy TrEMBL
Match:
A0A5A7TQG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00660 PE=4 SV=1)
HSP 1 Score: 67.0 bits (162), Expect = 4.0e-08
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query: 11 VVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDSQV 61
V R+M + RWWS T +SK VN R CWISQVTR+IL RAN RSA+GD QV
Sbjct: 51 VERKMWMRRWWSATPRSKNVNVVRCCWISQVTRMILERANLRSAKGDFQV 100
BLAST of IVF0000899 vs. NCBI nr
Match:
KGN47035.1 (hypothetical protein Csa_021001 [Cucumis sativus])
HSP 1 Score: 93.2 bits (230), Expect = 8.36e-23
Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 0
Query: 2 IQVYGIVALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDSQVS 61
I YG+VALV R+ML++RWWSVT++SK VN ARRCWISQVTR+ILA+ N SA G+ S
Sbjct: 7 IPTYGVVALVERKMLMTRWWSVTIRSKNVNMARRCWISQVTRVILAKVNPGSAMGNFLKS 66
Query: 62 N-ELAIVVVVLVGN 74
ELAIV+VVLVGN
Sbjct: 67 QYELAIVIVVLVGN 80
BLAST of IVF0000899 vs. NCBI nr
Match:
KAA0058462.1 (hypothetical protein E6C27_scaffold132G00500 [Cucumis melo var. makuwa] >TYK07284.1 hypothetical protein E5676_scaffold606G001840 [Cucumis melo var. makuwa])
HSP 1 Score: 89.7 bits (221), Expect = 2.32e-21
Identity = 44/50 (88.00%), Postives = 47/50 (94.00%), Query Frame = 0
Query: 9 ALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDS 58
ALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHR + ++
Sbjct: 19 ALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRLSSNEA 68
BLAST of IVF0000899 vs. NCBI nr
Match:
KAA0026314.1 (hypothetical protein E6C27_scaffold19G003290 [Cucumis melo var. makuwa])
HSP 1 Score: 75.1 bits (183), Expect = 2.19e-15
Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 0
Query: 1 MIQVYGIVALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHR 52
MI VYG+VALVVR+ L+ RWWSVTL SK VN RRC ISQVT +ILARANHR
Sbjct: 1 MIPVYGVVALVVRKKLVRRWWSVTLGSKKVNVVRRCLISQVTHMILARANHR 52
BLAST of IVF0000899 vs. NCBI nr
Match:
TYK16359.1 (hypothetical protein E5676_scaffold21G001430 [Cucumis melo var. makuwa])
HSP 1 Score: 73.9 bits (180), Expect = 3.58e-14
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 0
Query: 8 VALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSARGDSQVSNELAIV 67
+ LVV ML+ WWSVT +SK +N ARRCWISQVTR +L RAN +S RGDS+VS I
Sbjct: 23 ILLVVGTMLMRCWWSVTSRSKNMNMARRCWISQVTREVLTRANPKSVRGDSRVSKSCGIA 82
Query: 68 VVVLVGNSLHGY 79
G+SL+ Y
Sbjct: 83 -----GDSLNNY 89
BLAST of IVF0000899 vs. NCBI nr
Match:
TYK04364.1 (hypothetical protein E5676_scaffold675G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 65.1 bits (157), Expect = 3.83e-11
Identity = 43/82 (52.44%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 2 IQVYGIVALVVREMLLSRWWSVTLQSKYVNKARRCWISQVTRLILARANHRSA------- 61
I Y +VAL VR+ML+ RWWSVT +SK VN AR C ISQVT +ILARAN R
Sbjct: 5 ILAYNVVALAVRKMLMRRWWSVTPRSKNVNMARHCLISQVTHVILARANPRLLGIEAMQK 64
Query: 62 ---RGDSQVSNELAIVVVVLVG 73
R SQV V VVL G
Sbjct: 65 LILRLRSQVKEGRKSVSVVLCG 86
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KBJ6 | 2.3e-16 | 67.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178440 PE=4 SV=1 | [more] |
A0A5D3C7R8 | 1.5e-15 | 88.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SKT6 | 5.0e-11 | 75.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3D1M5 | 8.6e-11 | 55.56 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7TQG8 | 4.0e-08 | 66.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KGN47035.1 | 8.36e-23 | 67.57 | hypothetical protein Csa_021001 [Cucumis sativus] | [more] |
KAA0058462.1 | 2.32e-21 | 88.00 | hypothetical protein E6C27_scaffold132G00500 [Cucumis melo var. makuwa] >TYK0728... | [more] |
KAA0026314.1 | 2.19e-15 | 75.00 | hypothetical protein E6C27_scaffold19G003290 [Cucumis melo var. makuwa] | [more] |
TYK16359.1 | 3.58e-14 | 55.56 | hypothetical protein E5676_scaffold21G001430 [Cucumis melo var. makuwa] | [more] |
TYK04364.1 | 3.83e-11 | 52.44 | hypothetical protein E5676_scaffold675G00350 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |