IVF0000277 (gene) Melon (IVF77) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATCGAGGAGTTCACTACCAATGTCAAAATTTGCTTACATTTCTCAAACATTTCCTTTCTCCCATATCAACAATATTTTTCCCTTCAAACCACAAAAACCCACACCAACAATCCCCAAATTTCACAAACCCTAACTATTCCATCTTTCTTCTAACTAAAATCTGATTCAATCCCCCATGGATAACAAAGCAGATCGCAAAGCTCCTAGGCCCAACGATAGAAACATTCCCAATCACAATCTCAATCACAATCACAATCACCATCACAATCACCATCACAATCACCATCACTATCACAGAATGGCAATCACAGAGTTGAATTTAGCAGATCTTAAGCACAATAATCATCACCTCCTCGTCTCTCCCTCGCCACCCTCCACCGCCACCAAGACTCCCTCCTCTGCTAAAGCCAACTGTCTCTGTTCTCCAACCACTCACATTGGCTCCTTCCGTTGCCGGCACCACCGGCATGCTGGAATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAACCTACCGAAATAATGGGACCTTTTTCGCCTTGACTTGCCTTTTTCCTTCTTTTCTGGAGGCGGCTTTGTTTTGTTTATTTGTTCCTTTGTGTTCCTGCTTCCTCTTCCAGTTGGTGATGCAAAAATGTGGGGAATGAATGGAGGATTTCGTTATTGATTTATTGATTTATTTTTGTGTTAGACATGGGGGATTTGCTTGTGTTTAATAATTAGCTTTGCTTCCATGCTCCTTACCCACTTATTTTACATCTTCAATGGAATATTTTATTTTTATGCTAACGTTATTTTATATTTATAGATATGTATTCAAATAGACCTC AAAATCGAGGAGTTCACTACCAATGTCAAAATTTGCTTACATTTCTCAAACATTTCCTTTCTCCCATATCAACAATATTTTTCCCTTCAAACCACAAAAACCCACACCAACAATCCCCAAATTTCACAAACCCTAACTATTCCATCTTTCTTCTAACTAAAATCTGATTCAATCCCCCATGGATAACAAAGCAGATCGCAAAGCTCCTAGGCCCAACGATAGAAACATTCCCAATCACAATCTCAATCACAATCACAATCACCATCACAATCACCATCACAATCACCATCACTATCACAGAATGGCAATCACAGAGTTGAATTTAGCAGATCTTAAGCACAATAATCATCACCTCCTCGTCTCTCCCTCGCCACCCTCCACCGCCACCAAGACTCCCTCCTCTGCTAAAGCCAACTGTCTCTGTTCTCCAACCACTCACATTGGCTCCTTCCGTTGCCGGCACCACCGGCATGCTGGAATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAACCTACCGAAATAATGGGACCTTTTTCGCCTTGACTTGCCTTTTTCCTTCTTTTCTGGAGGCGGCTTTGTTTTGTTTATTTGTTCCTTTGTGTTCCTGCTTCCTCTTCCAGTTGGTGATGCAAAAATGTGGGGAATGAATGGAGGATTTCGTTATTGATTTATTGATTTATTTTTGTGTTAGACATGGGGGATTTGCTTGTGTTTAATAATTAGCTTTGCTTCCATGCTCCTTACCCACTTATTTTACATCTTCAATGGAATATTTTATTTTTATGCTAACGTTATTTTATATTTATAGATATGTATTCAAATAGACCTC ATGGATAACAAAGCAGATCGCAAAGCTCCTAGGCCCAACGATAGAAACATTCCCAATCACAATCTCAATCACAATCACAATCACCATCACAATCACCATCACAATCACCATCACTATCACAGAATGGCAATCACAGAGTTGAATTTAGCAGATCTTAAGCACAATAATCATCACCTCCTCGTCTCTCCCTCGCCACCCTCCACCGCCACCAAGACTCCCTCCTCTGCTAAAGCCAACTGTCTCTGTTCTCCAACCACTCACATTGGCTCCTTCCGTTGCCGGCACCACCGGCATGCTGGAATGATCCGCGGCGGCTCCGTTGGCTCTAATCTCTCCGATTTGGCTCGTAAACCTACCGAAATAATGGGACCTTTTTCGCCTTGA MDNKADRKAPRPNDRNIPNHNLNHNHNHHHNHHHNHHHYHRMAITELNLADLKHNNHHLLVSPSPPSTATKTPSSAKANCLCSPTTHIGSFRCRHHRHAGMIRGGSVGSNLSDLARKPTEIMGPFSP Homology
BLAST of IVF0000277 vs. ExPASy TrEMBL
Match: A0A5A7TYF3 (Putative PGPS/D10 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70465G00010 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.8e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of IVF0000277 vs. ExPASy TrEMBL
Match: A0A0A0K3W3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278200 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 7.5e-41 Identity = 95/128 (74.22%), Postives = 107/128 (83.59%), Query Frame = 0
BLAST of IVF0000277 vs. ExPASy TrEMBL
Match: A0A7J6EXD7 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_008234 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18 Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of IVF0000277 vs. ExPASy TrEMBL
Match: A0A7J6H8T3 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_016661 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18 Identity = 46/82 (56.10%), Postives = 61/82 (74.39%), Query Frame = 0
BLAST of IVF0000277 vs. ExPASy TrEMBL
Match: A0A6J1CNY2 (uncharacterized protein LOC111013367 OS=Momordica charantia OX=3673 GN=LOC111013367 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.7e-16 Identity = 47/77 (61.04%), Postives = 63/77 (81.82%), Query Frame = 0
BLAST of IVF0000277 vs. NCBI nr
Match: KAA0048240.1 (putative PGPS/D10 protein [Cucumis melo var. makuwa] >TYK07880.1 putative PGPS/D10 protein [Cucumis melo var. makuwa]) HSP 1 Score: 181 bits (458), Expect = 1.19e-56 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of IVF0000277 vs. NCBI nr
Match: KGN44385.1 (hypothetical protein Csa_015645 [Cucumis sativus]) HSP 1 Score: 178 bits (452), Expect = 2.56e-55 Identity = 97/128 (75.78%), Postives = 106/128 (82.81%), Query Frame = 0
BLAST of IVF0000277 vs. NCBI nr
Match: KAG7024984.1 (hypothetical protein SDJN02_13804, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125 bits (313), Expect = 2.80e-34 Identity = 69/127 (54.33%), Postives = 82/127 (64.57%), Query Frame = 0
BLAST of IVF0000277 vs. NCBI nr
Match: KAG6607735.1 (hypothetical protein SDJN03_01077, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037310.1 hypothetical protein SDJN02_00935, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 103 bits (258), Expect = 6.13e-26 Identity = 65/124 (52.42%), Postives = 81/124 (65.32%), Query Frame = 0
BLAST of IVF0000277 vs. NCBI nr
Match: KAF4362350.1 (hypothetical protein F8388_008234 [Cannabis sativa]) HSP 1 Score: 102 bits (253), Expect = 3.05e-25 Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 0
BLAST of IVF0000277 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related ) HSP 1 Score: 60.8 bits (146), Expect = 8.9e-10 Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of IVF0000277 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related ) HSP 1 Score: 57.4 bits (137), Expect = 9.8e-09 Identity = 31/52 (59.62%), Postives = 34/52 (65.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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