IVF0000137 (gene) Melon (IVF77) v1

Overview


Name	IVF0000137
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CACTA en-spm transposon protein
Location	chr12: 8662208 .. 8662411 (+)
RNA-Seq Expression	IVF0000137
Synteny	IVF0000137

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGCGAGCAGTTCCACGACGTCATGTTCTCAATCGATCATAGAAAGACAGATTCAAATAAAAGCTAAACTTGATCAAGCTTTGGAATGGGTTGAATTGCAAGATAGAAATTACCAAGCGTTAGCTTCAGAAATGAAACAAATGCGAAAACTGATAGAAAATATGACTCGGGCACAGGAAGGACCACCACATGATCCTTAG

mRNA sequence

ATGAGTGCGAGCAGTTCCACGACGTCATGTTCTCAATCGATCATAGAAAGACAGATTCAAATAAAAGCTAAACTTGATCAAGCTTTGGAATGGGTTGAATTGCAAGATAGAAATTACCAAGCGTTAGCTTCAGAAATGAAACAAATGCGAAAACTGATAGAAAATATGACTCGGGCACAGGAAGGACCACCACATGATCCTTAG

Coding sequence (CDS)

ATGAGTGCGAGCAGTTCCACGACGTCATGTTCTCAATCGATCATAGAAAGACAGATTCAAATAAAAGCTAAACTTGATCAAGCTTTGGAATGGGTTGAATTGCAAGATAGAAATTACCAAGCGTTAGCTTCAGAAATGAAACAAATGCGAAAACTGATAGAAAATATGACTCGGGCACAGGAAGGACCACCACATGATCCTTAG

Protein sequence

MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQEGPPHDP

Homology

[Close]

BLAST of IVF0000137 vs. ExPASy TrEMBL
Match: A0A5D3C9V0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold534G00180 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.6e-26
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ 60
           MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ
Sbjct: 568 MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ 627

Query: 61  EGPPHDP 68
           EGPPHDP
Sbjct: 628 EGPPHDP 634

[Close]

BLAST of IVF0000137 vs. ExPASy TrEMBL
Match: A0A5A7VKQ4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G00150 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.3e-19
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1   MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ 60
           MSASSSTTSCSQS  ER+IQI+AKLDQ LE +E QDRN+QALASEM+QMRKLI +MTRAQ
Sbjct: 665 MSASSSTTSCSQSATEREIQIQAKLDQDLERIEFQDRNFQALASEMEQMRKLIHDMTRAQ 724

Query: 61  EGPPHDP 68
           +GPPHDP
Sbjct: 725 QGPPHDP 731

[Close]

BLAST of IVF0000137 vs. ExPASy TrEMBL
Match: A0A5A7UML8 (Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00080 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-18
Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 3   ASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQEG 62
           ASSSTTSCSQS  ER+IQI+AKLDQALE  ELQDRNYQALA EM+Q+RKLI++MTRAQ+G
Sbjct: 50  ASSSTTSCSQSTTEREIQIQAKLDQALEQNELQDRNYQALALEMEQIRKLIQDMTRAQQG 109

Query: 63  PPHDP 68
           PPHDP
Sbjct: 110 PPHDP 114

[Close]

BLAST of IVF0000137 vs. ExPASy TrEMBL
Match: A0A5A7TXR1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00280 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 2   SASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQE 61
           SASSSTTSCSQS  ER+IQI+ KLDQALE ++LQDRNYQAL SEM+QMRKLI +MTR Q+
Sbjct: 78  SASSSTTSCSQSATEREIQIQDKLDQALERIKLQDRNYQALTSEMEQMRKLIHDMTRTQQ 137

Query: 62  GPPHDP 68
           GPP+DP
Sbjct: 138 GPPYDP 143

[Close]

BLAST of IVF0000137 vs. ExPASy TrEMBL
Match: A0A5D3DJ43 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2774G00020 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.9e-17
Identity = 52/66 (78.79%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 2   SASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQE 61
           SASSSTTS SQS  ER+IQI+AKLDQALE ++LQDRNYQALASEM+QMRKLI++MTRAQ+
Sbjct: 195 SASSSTTSWSQSATEREIQIQAKLDQALERIKLQDRNYQALASEMEQMRKLIQDMTRAQQ 254

Query: 62  GPPHDP 68
           GP H P
Sbjct: 255 GPAHYP 260

[Close]

BLAST of IVF0000137 vs. NCBI nr
Match: KAA0040682.1 (uncharacterized protein E6C27_scaffold540G00210 [Cucumis melo var. makuwa] >TYK08767.1 uncharacterized protein E5676_scaffold534G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 127 bits (319), Expect = 2.94e-32
Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0


Query: 1   MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ 60
           MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ
Sbjct: 568 MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ 627

Query: 61  EGPPHDP 67
           EGPPHDP
Sbjct: 628 EGPPHDP 634

[Close]

BLAST of IVF0000137 vs. NCBI nr
Match: KAA0054699.1 (zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa] >TYJ95596.1 zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (249), Expect = 1.70e-25
Identity = 53/65 (81.54%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 3   ASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQEG 62
           ASSSTTSCSQS  ER+IQI+AKLDQALE  ELQDRNYQALA EM+Q+RKLI++MTRAQ+G
Sbjct: 50  ASSSTTSCSQSTTEREIQIQAKLDQALEQNELQDRNYQALALEMEQIRKLIQDMTRAQQG 109

Query: 63  PPHDP 67
           PPHDP
Sbjct: 110 PPHDP 114

[Close]

BLAST of IVF0000137 vs. NCBI nr
Match: KAA0046746.1 (uncharacterized protein E6C27_scaffold216G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 6.22e-24
Identity = 51/66 (77.27%), Postives = 59/66 (89.39%), Query Frame = 0


Query: 2   SASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQE 61
           SASSSTTSCSQS  ER+IQI+ KLDQALE ++LQDRNYQAL SEM+QMRKLI +MTR Q+
Sbjct: 78  SASSSTTSCSQSATEREIQIQDKLDQALERIKLQDRNYQALTSEMEQMRKLIHDMTRTQQ 137

Query: 62  GPPHDP 67
           GPP+DP
Sbjct: 138 GPPYDP 143

[Close]

BLAST of IVF0000137 vs. NCBI nr
Match: KAA0067016.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26252.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (256), Expect = 1.27e-23
Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 1   MSASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQ 60
           MSASSSTTSCSQS  ER+IQI+AKLDQ LE +E QDRN+QALASEM+QMRKLI +MTRAQ
Sbjct: 665 MSASSSTTSCSQSATEREIQIQAKLDQDLERIEFQDRNFQALASEMEQMRKLIHDMTRAQ 724

Query: 61  EGPPHDP 67
           +GPPHDP
Sbjct: 725 QGPPHDP 731

[Close]

BLAST of IVF0000137 vs. NCBI nr
Match: KAA0063986.1 (uncharacterized protein E6C27_scaffold616G001520 [Cucumis melo var. makuwa] >TYK05150.1 uncharacterized protein E5676_scaffold1415G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 93.2 bits (230), Expect = 4.72e-22
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 2   SASSSTTSCSQSIIERQIQIKAKLDQALEWVELQDRNYQALASEMKQMRKLIENMTRAQE 61
           SA+SS TSCSQS  ER+IQI+ K DQALE +ELQDRNYQALA EM+QMRK+I++MTR Q+
Sbjct: 97  SANSSMTSCSQSATEREIQIQVKCDQALEQIELQDRNYQALALEMEQMRKMIQDMTRTQQ 156

Query: 62  GPPHDP 67
            PPHDP
Sbjct: 157 RPPHDP 162

The following BLAST results are available for this feature:

BLAST of IVF0000137 vs.


Match Name	E-value	Identity	Description

BLAST of IVF0000137 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9V0	1.6e-26	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VKQ4	3.3e-19	80.60	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A5A7UML8	2.1e-18	81.54	Zinc finger protein ZPR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5A7TXR1	1.8e-17	77.27	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DJ43	8.9e-17	78.79	CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of IVF0000137 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040682.1	2.94e-32	100.00	uncharacterized protein E6C27_scaffold540G00210 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0054699.1	1.70e-25	81.54	zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa] >TYJ95596.1 zin...	[more]
KAA0046746.1	6.22e-24	77.27	uncharacterized protein E6C27_scaffold216G00280 [Cucumis melo var. makuwa]	[more]
KAA0067016.1	1.27e-23	80.60	CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK26252.1 CACTA en-...	[more]
KAA0063986.1	4.72e-22	72.73	uncharacterized protein E6C27_scaffold616G001520 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of IVF0000137 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 39..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000137.2	IVF0000137.2	mRNA