Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCTCATCAAAGTAGATAAGGAGCTGCTTGTCTGGGGGGAATACACATTAGAAGAAATAATTCAAATTGTAGACAAACGGAAAAAGCGCAAGAAGTCTCAGAAGAGTCAGCCAGAGCAAGTCATAGACAAGCTTCTCAAATGTCACGATTGGTACCAAATCTATAATGATCCGGTCTTAAGGAAGCTTGTCGTGCAGCCCTATGAGAGCATTCAGAATCTATACGAGGATCCGCAGGTAGTTCGAGATATGCAAACCACTTTGGGAGAGATATTTCTATATTCTTTTTTGAGCTAGTTGTTTTGAGGAGTAATGGATCATCTAGTGGTAACCAGTCTTCACAACACTTTATATAGGCGCATTCCCTTCCTTGCACTACTTGTAAGGTAAGAAGTTCTTGGATTCTCCTCTTTTTGAGGGTATCTTCTCTTTCTTATCTCAGATGTATGGAAATGAGCCCTCTGGTAGCCCTGTCCCTGTTCTTGTACTTGCATATGCCTATTCTTCTCAAATTCTCCTTGGTCTTCGCTAA
mRNA sequence
ATGTATCTCATCAAAGTAGATAAGGAGCTGCTTGTCTGGGGGGAATACACATTAGAAGAAATAATTCAAATTGTAGACAAACGGAAAAAGCGCAAGAAGTCTCAGAAGAGTCAGCCAGAGCAAGTCATAGACAAGCTTCTCAAATGTCACGATTGGTACCAAATCTATAATGATCCGGTCTTAAGGAAGCTTGTCGTGCAGCCCTATGAGAGCATTCAGAATCTATACGAGGATCCGCAGATGTATGGAAATGAGCCCTCTGGTAGCCCTGTCCCTGTTCTTGTACTTGCATATGCCTATTCTTCTCAAATTCTCCTTGGTCTTCGCTAA
Coding sequence (CDS)
ATGTATCTCATCAAAGTAGATAAGGAGCTGCTTGTCTGGGGGGAATACACATTAGAAGAAATAATTCAAATTGTAGACAAACGGAAAAAGCGCAAGAAGTCTCAGAAGAGTCAGCCAGAGCAAGTCATAGACAAGCTTCTCAAATGTCACGATTGGTACCAAATCTATAATGATCCGGTCTTAAGGAAGCTTGTCGTGCAGCCCTATGAGAGCATTCAGAATCTATACGAGGATCCGCAGATGTATGGAAATGAGCCCTCTGGTAGCCCTGTCCCTGTTCTTGTACTTGCATATGCCTATTCTTCTCAAATTCTCCTTGGTCTTCGCTAA
Protein sequence
MYLIKVDKELLVWGEYTLEEIIQIVDKRKKRKKSQKSQPEQVIDKLLKCHDWYQIYNDPVLRKLVVQPYESIQNLYEDPQMYGNEPSGSPVPVLVLAYAYSSQILLGLR
Homology
BLAST of HG10021792 vs. NCBI nr
Match:
KAF3452224.1 (hypothetical protein FNV43_RR08322 [Rhamnella rubrinervis])
HSP 1 Score: 82.0 bits (201), Expect = 3.4e-12
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 0
Query: 2 YLIKVDKELLVWGEYTLEEIIQIV----DKRKKRKKS---------QKSQPEQVIDKLLK 61
YL+K D + LVWGEY+LEEI+ I K KK S + + PE +I+KL +
Sbjct: 108 YLLKEDTQPLVWGEYSLEEILAIAAGASQKNKKATTSTPAEQLQIMEATPPEIIIEKLER 167
Query: 62 CHDWYQIYNDPVLRKLVVQPYESIQNLYED 79
C+ WY+IYNDP+LRKL V Y+S++NLY+D
Sbjct: 168 CNHWYEIYNDPILRKLSVHSYQSLRNLYDD 197
BLAST of HG10021792 vs. NCBI nr
Match:
TXG46227.1 (hypothetical protein EZV62_028258 [Acer yangbiense])
HSP 1 Score: 57.4 bits (137), Expect = 9.0e-05
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0
Query: 2 YLIKVDKELLVWGEYTLEEIIQIVDKRKKRKKSQKSQPEQVIDKLLKCHDWYQIYNDPVL 61
YL K DK LVWGEYT E+I+ I + + KK + V+D L KC DW+ IY++ VL
Sbjct: 120 YLTKEDKSPLVWGEYTREQILDISECSRHHKKDTTVPNQVVLDNLSKCEDWFDIYSNEVL 179
Query: 62 RKLVVQPY 70
+ + Y
Sbjct: 180 VNRLFRSY 187
BLAST of HG10021792 vs. NCBI nr
Match:
EEF27325.1 (conserved hypothetical protein [Ricinus communis])
HSP 1 Score: 54.3 bits (129), Expect = 7.6e-04
Identity = 26/77 (33.77%), Postives = 47/77 (61.04%), Query Frame = 0
Query: 2 YLIKVDKELLVWGEYTLEEIIQIVDKRKKRKKSQKSQPEQVIDKLLKCHDWYQIYNDPVL 61
Y+ K DK +VWGEY+L++I++I + R + + L KC+DWY++Y L
Sbjct: 69 YVTKEDKNPVVWGEYSLDQIMEIAAPVRSRINTLPT-------GLYKCNDWYEVYEQDSL 128
Query: 62 RKLVVQPYESIQNLYED 79
+ +++ Y +I+N++ED
Sbjct: 129 KDRLMRGYNNIRNVFED 138
BLAST of HG10021792 vs. ExPASy TrEMBL
Match:
A0A5C7GNV1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027796 PE=4 SV=1)
HSP 1 Score: 57.4 bits (137), Expect = 4.4e-05
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0
Query: 2 YLIKVDKELLVWGEYTLEEIIQIVDKRKKRKKSQKSQPEQVIDKLLKCHDWYQIYNDPVL 61
YL K DK LVWGEYT E+I+ I + + KK + V+D L KC DW+ IY++ VL
Sbjct: 120 YLTKEDKSPLVWGEYTREQILDISECSRHHKKDTTVPNQVVLDNLSKCEDWFDIYSNEVL 179
Query: 62 RKLVVQPY 70
+ + Y
Sbjct: 180 VNRLFRSY 187
BLAST of HG10021792 vs. ExPASy TrEMBL
Match:
B9T9Z5 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2118790 PE=4 SV=1)
HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04
Identity = 26/77 (33.77%), Postives = 47/77 (61.04%), Query Frame = 0
Query: 2 YLIKVDKELLVWGEYTLEEIIQIVDKRKKRKKSQKSQPEQVIDKLLKCHDWYQIYNDPVL 61
Y+ K DK +VWGEY+L++I++I + R + + L KC+DWY++Y L
Sbjct: 69 YVTKEDKNPVVWGEYSLDQIMEIAAPVRSRINTLPT-------GLYKCNDWYEVYEQDSL 128
Query: 62 RKLVVQPYESIQNLYED 79
+ +++ Y +I+N++ED
Sbjct: 129 KDRLMRGYNNIRNVFED 138
BLAST of HG10021792 vs. ExPASy TrEMBL
Match:
A0A5A7SZR2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43296G00060 PE=4 SV=1)
HSP 1 Score: 53.1 bits (126), Expect = 8.2e-04
Identity = 31/101 (30.69%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 2 YLIKVDKELLVWGEYTLEEIIQIVDKRKKRKKSQKSQPE-------QVIDKLLKCHDWYQ 61
Y+ K DK VWG++T+ +++ + K ++K PE ++ KL +C+D+
Sbjct: 73 YITKQDKAPYVWGKFTINQVLAEAKAARDHKSTRKITPETGEDKNQRIYAKLRQCNDFLA 132
Query: 62 IYNDPVLRKLVVQPYESIQNLYEDPQMYGNEPSGSPVPVLV 96
+ DP L L++ Y++I+NL+ED Q + SP+ +LV
Sbjct: 133 LRKDPELADLLLLKYQTIRNLWEDEQSIKAQLE-SPMGILV 172
BLAST of HG10021792 vs. ExPASy TrEMBL
Match:
A0A5D3BSH0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83326G00020 PE=4 SV=1)
HSP 1 Score: 53.1 bits (126), Expect = 8.2e-04
Identity = 31/101 (30.69%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 2 YLIKVDKELLVWGEYTLEEIIQIVDKRKKRKKSQKSQPE-------QVIDKLLKCHDWYQ 61
Y+ K DK VWG++T+ +++ + K ++K PE ++ KL +C+D+
Sbjct: 249 YITKQDKAPYVWGKFTINQVLAEAKAARDHKSTRKITPETGEDKNQRIYAKLRQCNDFLA 308
Query: 62 IYNDPVLRKLVVQPYESIQNLYEDPQMYGNEPSGSPVPVLV 96
+ DP L L++ Y++I+NL+ED Q + SP+ +LV
Sbjct: 309 LRKDPELADLLLLKYQTIRNLWEDEQSIKAQLE-SPMGILV 348
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAF3452224.1 | 3.4e-12 | 47.78 | hypothetical protein FNV43_RR08322 [Rhamnella rubrinervis] | [more] |
TXG46227.1 | 9.0e-05 | 42.65 | hypothetical protein EZV62_028258 [Acer yangbiense] | [more] |
EEF27325.1 | 7.6e-04 | 33.77 | conserved hypothetical protein [Ricinus communis] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5C7GNV1 | 4.4e-05 | 42.65 | Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027796 PE=4 SV=1 | [more] |
B9T9Z5 | 3.7e-04 | 33.77 | Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_2118790 PE=4 SV=1 | [more] |
A0A5A7SZR2 | 8.2e-04 | 30.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BSH0 | 8.2e-04 | 30.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |