Homology
BLAST of HG10021662 vs. NCBI nr
Match:
XP_038877791.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa hispida])
HSP 1 Score: 1374.8 bits (3557), Expect = 0.0e+00
Identity = 682/704 (96.88%), Postives = 695/704 (98.72%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLCHSPSTFFTDHH LSNSLT QRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQ+
Sbjct: 1 MAFQLCHSPSTFFTDHHSLSNSLTSQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
YA QET NP+PS+DEISKYPDGKS SSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS
Sbjct: 61 YAPQETHNPSPSNDEISKYPDGKSSSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDSCNPC+EDVADVLK IGSNIL+QDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI
Sbjct: 121 ESLDSCNPCQEDVADVLKEIGSNILQQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSAMIDAYGRAGNVD+AFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYV EAVEVFQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVYEAVEVFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLG VV+LL+GEQDK
Sbjct: 481 RTFSRLIELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGFVVKLLMGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQ+YKDLQSRS
Sbjct: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQLYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSLYLKGLSLGA LTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLYLKGLSLGAGLTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of HG10021662 vs. NCBI nr
Match:
XP_008464281.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis melo] >KAA0042345.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK15469.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 665/704 (94.46%), Postives = 686/704 (97.44%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLCHSP TFFT HH LSNSLTPQRKTTL NSS LFKLNPIPRHS PFLQITN+SLQ+
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
++ QET N PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARYASL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTALLALRYFQD+LKSSKQ I
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVD+AFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCVVRANPKLG VVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of HG10021662 vs. NCBI nr
Match:
XP_004139516.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sativus] >KGN64994.1 hypothetical protein Csa_022775 [Cucumis sativus])
HSP 1 Score: 1331.2 bits (3444), Expect = 0.0e+00
Identity = 659/704 (93.61%), Postives = 682/704 (96.88%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLC+SP TFFT+HH LSNSLTPQRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQ+
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
+A Q+TQN PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL R+S
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTALLALRYFQD+LKSSKQ I
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVD+AFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCVVRANPKLG VVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of HG10021662 vs. NCBI nr
Match:
XP_022142513.1 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica charantia])
HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 643/704 (91.34%), Postives = 665/704 (94.46%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLCHSPSTFF+DHH LSNSL Q + TL SS FKLNP P HSK L+ITNVSLQ+
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
YA QE QNP P+ DE SKYPDGKS SSSKSSVWVNPRSPRASKLR QSYEARYASLTRIS
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDSCNPCEEDVADVLK +GSNILEQDAV VLNNMSNS TALLAL+ FQ VLKSSK+AI
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
YNVTLKV RK RDMEGAEKLF+EMLKRGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSAMIDAYGRAGNVD+AFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+F+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCV RAN KLG VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGD RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSL+LKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of HG10021662 vs. NCBI nr
Match:
KAG6583722.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1278.5 bits (3307), Expect = 0.0e+00
Identity = 636/705 (90.21%), Postives = 667/705 (94.61%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLC-NSSRLFKLNPIPRHSKPFLQITNVSLQ 60
MAFQL H PSTFFTDH NSLT KTTLC +SSR+FKLNPIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSSSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 61 DYATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRI 120
+YA QET+NP+PSDDEISK+PDGKSGSSSK+SVWVNP SPRASKLRKQSYEARYASL +I
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQA 180
SESLDSCNPCE+DVADVLK I S ILEQDA+ VLNNMSNSQTALL LRYFQDVLKSSKQA
Sbjct: 121 SESLDSCNPCEDDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVLRYFQDVLKSSKQA 180
Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
+FYNVTLKVFRKCRD EGAEKLF+EML+RGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
MPSFDCNPD++TYS MIDAYGRAGNVD+AFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 361 LLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
LLRAY R+RY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+EVF+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
TCSPDSWTFSSMITIYSCSG VSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQD 540
VRTF+RLLELGLTPDDRFCGCLLNVITQTPK ELSKLIDCV RANPKLG VV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
EGDFRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 661 IFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
+FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of HG10021662 vs. ExPASy Swiss-Prot
Match:
Q8GWE0 (Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=P67 PE=1 SV=3)
HSP 1 Score: 929.5 bits (2401), Expect = 2.3e-269
Identity = 458/702 (65.24%), Postives = 566/702 (80.63%), Query Frame = 0
Query: 5 LCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQDYATQ 64
LC SPS+ D L N L+ K+T + + N HS+ LQ T+VS+Q+ Q
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 65 ETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRISESLD 124
++ D P ++SKS VWVNP+SPRAS+LR++SY++RY+SL +++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 125 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAIFYNV 184
+C P E DV DV+ G + EQDAVV LNNM+N +TA L L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 185 TLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 244
T+KVFRK +D+E +EKLF+EML+RG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 245 CNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
C PD+VT +AMIDAYGRAGNVD+A SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 305 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 365 GRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPD 424
GR+RYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA E+FQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 425 SWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
SWTFSS+IT+Y+CSG+VSEAE L +M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 485 RLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQD-KEGD 544
++LELG+TPDDRFCGCLLNV+TQTP EE+ KLI CV +A PKLG VV++L+ EQ+ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 605 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASIFE 664
WSL+LK LSLGAALTALHVW+NDL++ LESGEE PPLLGINTGHGKHKYSDKGLA++FE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of HG10021662 vs. ExPASy Swiss-Prot
Match:
Q10PZ4 (Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0215900 PE=3 SV=1)
HSP 1 Score: 723.8 bits (1867), Expect = 1.9e-207
Identity = 372/673 (55.27%), Postives = 479/673 (71.17%), Query Frame = 0
Query: 36 RLFKLNPIPRHSKPFLQITNVSLQDYATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVN 95
R L+ P++ P VS+QD P PSD S G+S ++S+ VWVN
Sbjct: 13 RAISLSFQPKNPSPSPATARVSVQD------PPPPPSDANPS---PGRSSNTSR-YVWVN 72
Query: 96 PRSPRASKL-RKQSYEARYASLTRISESLDSCNPCEEDVADVLK-VIGSNILEQDAVVVL 155
P SPRA+ L R ++ R A L + +L +C E VA L+ EQDAV+VL
Sbjct: 73 PNSPRAAGLARARAGSGRRARLAAAAAALAACEAGEAPVAAALEAAFPEPPSEQDAVIVL 132
Query: 156 NNMSNSQTA-LLALRYFQDVLKSSKQAIFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKP 215
N S A +LAL +F + K+ I YNV LK RK R AE L+EEML+ GV+P
Sbjct: 133 NTTSARPAAVVLALWWFLRNAEVRKEVILYNVALKALRKRRRWSDAEALWEEMLREGVQP 192
Query: 216 DNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLY 275
DN TFST+ISCAR C +P KAVEWFEKMP F C+PD +TYSA+IDAYGRAG+ + A LY
Sbjct: 193 DNATFSTVISCARACGMPGKAVEWFEKMPDFGCSPDMLTYSAVIDAYGRAGDAETALRLY 252
Query: 276 DRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRA 335
DRAR E W++DP +T+I++H +GN+DG LNV+EEMKA G+KPNLV+YN++LDAMGRA
Sbjct: 253 DRARAEKWQLDPVICATVIRVHSSSGNFDGALNVFEEMKAAGVKPNLVVYNTVLDAMGRA 312
Query: 336 KRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRSRYGEDALLVYKEMKEKGLQLNVILY 395
RPW +KTI++E++ P+ ATY LL AY R+RYGEDA+ VY+ MK++ + ++V+LY
Sbjct: 313 MRPWVVKTIHRELVSQEAVPNKATYCCLLHAYTRARYGEDAMAVYRVMKDEVMDIDVVLY 372
Query: 396 NTLLAMCADVGYVNEAVEVFQDMKSS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNE 455
N LL+MCAD+GYV EA E+F+DMK+S PDSW++SSM+T+YSC+G V+ AE +LNE
Sbjct: 373 NMLLSMCADIGYVEEAEEIFRDMKASMDSRSKPDSWSYSSMVTLYSCTGNVAGAEGILNE 432
Query: 456 MVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTPK 515
MVEAGF PNIF+LTSLI+CYGKA R DDVVR+F L +LG+TPDDRFCGCLL V TP
Sbjct: 433 MVEAGFKPNIFILTSLIRCYGKAGRTDDVVRSFAMLEDLGITPDDRFCGCLLTVAAGTPA 492
Query: 516 EELSKLIDCVVRANPKLGLVVELLLGEQDKEGDFRTEASELFSVVSADVRKAYCNCLIDL 575
+EL K+I C+ R++ +LG VV LL+ R A EL VR YCNCL+DL
Sbjct: 493 DELGKVIGCIDRSSAQLGAVVRLLVDAAAPSEPLREAAGELLGGARGVVRMPYCNCLMDL 552
Query: 576 CVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKV 635
VNL ++KAC LLD+ L L IY ++Q+R+ TQWSL+L+GLS+GAALT LHVW++DL
Sbjct: 553 AVNLSQMEKACALLDVALRLGIYSNVQTRTQTQWSLHLRGLSVGAALTTLHVWMSDLYAA 612
Query: 636 LESGEELPPLLGINTGHGKHKYSDKGLASIFESHLKELNAPFHEAPEKVGWFLTTKVAAK 695
L++G+ELPPLLGI+TG GK+ YS KGLA++FESHLKEL+APFHEAP+K GWFLTT VAA+
Sbjct: 613 LQAGDELPPLLGIHTGQGKNTYSYKGLATVFESHLKELDAPFHEAPDKAGWFLTTSVAAR 672
Query: 696 SWLESRSSPELVA 704
WLE++ S ELVA
Sbjct: 673 HWLETKKSAELVA 675
BLAST of HG10021662 vs. ExPASy Swiss-Prot
Match:
B4F8Z1 (Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4577 GN=ATP4 PE=2 SV=1)
HSP 1 Score: 722.2 bits (1863), Expect = 5.5e-207
Identity = 380/709 (53.60%), Postives = 494/709 (69.68%), Query Frame = 0
Query: 5 LCHSPSTFFTD--HHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQDYA 64
LC SPS+ H +S S P+ + +P+ H VS+Q+
Sbjct: 6 LCRSPSSLLPSWPHRPISASFNPKNPS-----------SPVAAH---------VSVQETP 65
Query: 65 TQETQNPTPSDDEISKYPDGKSGSSSKSS--VWVNPRSPRASKL-RKQSYEARYASLTRI 124
Q Q+P+P D P+G SSS ++ +WVNP SPRA+ + R ++ R A L
Sbjct: 66 PQ-PQDPSPPSD---SNPNGTRPSSSSNTRFLWVNPNSPRAADVARARAGSGRRARLASA 125
Query: 125 SESLDSCNPCEEDVADVLK-VIGSNILEQDAVVVLNN--MSNSQTALLALRYFQDVLKSS 184
+ +L +C E V L+ EQDAV+VLN + ++TA+LALR+F K
Sbjct: 126 AAALGACETTESAVEAALQAAFPEPPSEQDAVIVLNTAAATRAETAVLALRWFLGNAKVR 185
Query: 185 KQAIFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEW 244
K+ I YNV LK+ RK R E L+ EML+ GV+PDN TFST+ISCAR C L +KAVEW
Sbjct: 186 KKVILYNVVLKLLRKKRLWSETEALWAEMLRDGVQPDNATFSTVISCARACGLHSKAVEW 245
Query: 245 FEKMPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGV 304
F+KMP F C+PD +TYSA+IDAYG AGN + A LYDRAR E W++DP ST+IK+H
Sbjct: 246 FDKMPEFGCSPDMLTYSAVIDAYGHAGNSEAALRLYDRARAEKWQLDPVICSTVIKVHST 305
Query: 305 AGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWAT 364
+GN+DG LNV+EEMKAIG++PNLV+YN++LDAMGRA RPW +KTI++EM+ PS AT
Sbjct: 306 SGNFDGALNVFEEMKAIGVRPNLVVYNTMLDAMGRALRPWVVKTIHREMVDQQVQPSRAT 365
Query: 365 YASLLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMK 424
Y LL AY R+RYGEDA+ VY+ MK++ + ++V+LYN LL+MCAD+GYV+EA E+F+DMK
Sbjct: 366 YCCLLHAYTRARYGEDAMAVYRLMKDEAMGIDVMLYNMLLSMCADIGYVDEAEEIFRDMK 425
Query: 425 SS--GTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAK 484
+S PDSW++SSM+T+YS + V AE +LNEMVEAGF PNIFVLTSLI+CYGK
Sbjct: 426 ASMGAHSKPDSWSYSSMVTLYSSTANVLSAEGILNEMVEAGFKPNIFVLTSLIRCYGKVG 485
Query: 485 RVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELL 544
R DDVVR+F L +LG+ PDDRFCGCLL+V TP EEL K+I C+ R+N +LG VV+LL
Sbjct: 486 RTDDVVRSFGMLQDLGIIPDDRFCGCLLSVAANTPAEELGKVISCIERSNVQLGAVVKLL 545
Query: 545 LGEQDKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYK 604
+ E FR A EL V+ YCNCL+DLCVNL+ ++KAC LLD L IY
Sbjct: 546 VDRSSSE-SFREAARELLRSSRGVVKMPYCNCLMDLCVNLNQMEKACALLDAAQQLGIYA 605
Query: 605 DLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEE-LPPLLGINTGHGKHKYS 664
++Q+R+ TQWSL+L+GLS+GAALT LHVW+NDL L++G E LPPLLGI+TG GK+ YS
Sbjct: 606 NIQTRTQTQWSLHLRGLSVGAALTTLHVWMNDLYTSLQTGNEGLPPLLGIHTGQGKNTYS 665
Query: 665 DKGLASIFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELV 703
D+GLA++FE+HLKEL+APFHEAP+K GWFLTT VAAK WLES+++ ELV
Sbjct: 666 DRGLAAMFEAHLKELDAPFHEAPDKAGWFLTTNVAAKQWLESKAASELV 689
BLAST of HG10021662 vs. ExPASy Swiss-Prot
Match:
Q9LS25 (Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g46580 PE=2 SV=1)
HSP 1 Score: 464.9 bits (1195), Expect = 1.6e-129
Identity = 270/717 (37.66%), Postives = 411/717 (57.32%), Query Frame = 0
Query: 2 AFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQDY 61
A +C +P T H L K +L SR KLN I+ SL+
Sbjct: 8 AIDVCFNPQNSDTKKHSLF------LKPSLFRQSRSRKLN-----------ISCSSLKQP 67
Query: 62 ATQETQNPTPSDDEISKYPDGKSGS----------SSKSSVWVNPRSPRASKLRKQ---- 121
T E + T +S+ S + S SVWVNP P+ S L Q
Sbjct: 68 KTLEEEPITTKTPSLSEQLKPLSATTLRQEQTQILSKPKSVWVNPTRPKRSVLSLQRQKR 127
Query: 122 ---SYEARYASLTRISESLDSCNPCEE-DVADVLKVIGSNILEQDAVVVLNNMSNSQTAL 181
SY + L + L+S E+ + +L I +A++VLN++ Q
Sbjct: 128 SAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTH 187
Query: 182 LALRYFQDVLKSSKQAIFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISC 241
+ + + IFYNVT+K R R + E++ EM+K GV+ DN+T+STII+C
Sbjct: 188 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 247
Query: 242 ARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRID 301
A+ C+L NKA+EWFE+M PD+VTYSA++D Y ++G V+ SLY+RA W+ D
Sbjct: 248 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 307
Query: 302 PATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYK 361
FS + K+ G AG+YDG V +EMK++ +KPN+V+YN+LL+AMGRA +P ++++
Sbjct: 308 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 367
Query: 362 EMIKNGFSPSWATYASLLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVG 421
EM++ G +P+ T +L++ YG++R+ DAL +++EMK K ++ ILYNTLL MCAD+G
Sbjct: 368 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIG 427
Query: 422 YVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVL 481
EA +F DMK S C PD++++++M+ IY GK +A E+ EM++AG N+
Sbjct: 428 LEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGC 487
Query: 482 TSLIQCYGKAKRVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDCVVR 541
T L+QC GKAKR+DDVV F+ ++ G+ PDDR CGCLL+V+ E+ K++ C+ R
Sbjct: 488 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 547
Query: 542 ANPKLGLVVELLLGEQDKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACE 601
AN KL V L++ E+ + + E + + + R+ +CNCLID+C + ++A E
Sbjct: 548 ANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHE 607
Query: 602 LLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLG 661
LL LG +Y L +++ +WSL ++ LS+GAA TAL W+ L +++ EELP L
Sbjct: 608 LLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFL 667
Query: 662 INTGHGKHKYSDKGLASIFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
TG G H++S +GLA+ F HL++L+APF ++ ++ G F+ TK SWLES+ P
Sbjct: 668 AQTGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of HG10021662 vs. ExPASy Swiss-Prot
Match:
Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 2.0e-47
Identity = 144/567 (25.40%), Postives = 275/567 (48.50%), Query Frame = 0
Query: 167 RYFQDVLKSSKQ--AIFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCA 226
++F ++ ++ Q I +N L V + E A LF+EM R ++ D +++T++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 227 RLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDP 286
+ A E +MP P+ V+YS +ID + +AG D A +L+ R +D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 287 ATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKE 346
+++T++ I+ G + L++ EM ++GIK ++V YN+LL G+ + ++K ++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 347 MIKNGFSPSWATYASLLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGY 406
M + P+ TY++L+ Y + ++A+ +++E K GL+ +V+LY+ L+ G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 407 VNEAVEVFQDMKSSGTCSPDSWTFSSMITI------------YSCSGKVSEAEEMLNEMV 466
V AV + +M G SP+ T++S+I YS G + + L+ +
Sbjct: 565 VGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 624
Query: 467 EAGFDPNIFVLTSLI---------QCYGKAKRVDDVVRTFNRLLELGLTPDDRFCGCLLN 526
E + I + L C + + ++ F ++ +L + P+ +LN
Sbjct: 625 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 684
Query: 527 VITQTPK-EELSKLIDCV-VRANPKLGLVVELLLGEQDKEGDFRTEASELFSVVS---AD 586
++ E+ S L++ + + N G+V LL+G+++ + +A LF V+
Sbjct: 685 ACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGS 744
Query: 587 VRKAYCNCLIDLCVNLDLLDKACELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAAL 646
A+ N L D+ + + EL+ L G + Q+++++ S S L L +S GAA
Sbjct: 745 TASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAAR 804
Query: 647 TALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASIFESHLKELNAPFHEA 703
+H W+ ++ ++ G ELP +L I TG GKH D L E L+ ++APFH +
Sbjct: 805 AMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLS 864
BLAST of HG10021662 vs. ExPASy TrEMBL
Match:
A0A5A7TLM5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00400 PE=3 SV=1)
HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 665/704 (94.46%), Postives = 686/704 (97.44%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLCHSP TFFT HH LSNSLTPQRKTTL NSS LFKLNPIPRHS PFLQITN+SLQ+
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
++ QET N PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARYASL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTALLALRYFQD+LKSSKQ I
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVD+AFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCVVRANPKLG VVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of HG10021662 vs. ExPASy TrEMBL
Match:
A0A1S3CL39 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502208 PE=3 SV=1)
HSP 1 Score: 1342.4 bits (3473), Expect = 0.0e+00
Identity = 665/704 (94.46%), Postives = 686/704 (97.44%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLCHSP TFFT HH LSNSLTPQRKTTL NSS LFKLNPIPRHS PFLQITN+SLQ+
Sbjct: 1 MAFQLCHSPPTFFTYHHSLSNSLTPQRKTTLSNSSPLFKLNPIPRHSTPFLQITNISLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
++ QET N PSDDEISKY D KSGSSSKSSVWVNPRSPRASKLRKQSYEARYASL RIS
Sbjct: 61 HSPQETHNTIPSDDEISKYSDAKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLVRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDSCNPCE DVADVLKVIG+NILEQDAVVVLNNMSNSQTALLALRYFQD+LKSSKQ I
Sbjct: 121 ESLDSCNPCEVDVADVLKVIGNNILEQDAVVVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAE+LFEEML RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEELFEEMLNRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVD+AFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIK+GFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKSGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMK+SGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKNSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPKEE+SKLIDCVVRANPKLG VVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKEEISKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELL+LGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLNLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of HG10021662 vs. ExPASy TrEMBL
Match:
A0A0A0LVP1 (Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV=1)
HSP 1 Score: 1331.2 bits (3444), Expect = 0.0e+00
Identity = 659/704 (93.61%), Postives = 682/704 (96.88%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLC+SP TFFT+HH LSNSLTPQRKTTL NSS LFKL+PIPRHSKPFLQITNVSLQ+
Sbjct: 1 MAFQLCYSPPTFFTEHHFLSNSLTPQRKTTLSNSSPLFKLSPIPRHSKPFLQITNVSLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
+A Q+TQN PS DEISKYPD KSGSSS SSVWVNPRSPRASKLRKQSYEARYASL R+S
Sbjct: 61 HAPQDTQNTIPSADEISKYPDSKSGSSSNSSVWVNPRSPRASKLRKQSYEARYASLIRVS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDS NPCE DVADVLKVIG+NILE+DA++VLNNMSNSQTALLALRYFQD+LKSSKQ I
Sbjct: 121 ESLDSSNPCEVDVADVLKVIGNNILERDAILVLNNMSNSQTALLALRYFQDMLKSSKQTI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
FYNVTLKVFRKCRDMEGAEKLFEEM+ RGVKPDNVTFSTIISCARLCSLP+KAVEWFEKM
Sbjct: 181 FYNVTLKVFRKCRDMEGAEKLFEEMINRGVKPDNVTFSTIISCARLCSLPSKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYS MIDAYGRAGNVD+AFSLYDRARTENWRIDPATFSTMIKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYN LLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDAL+VYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+FQDMKSSGT
Sbjct: 361 LRAYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGT 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSC GKVSEAEEMLN+MVEAGFDPNIFVLTSLIQCYGKAKRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTFN+L+ELGLTPDDRFCGCLLNVITQTPK EL KLIDCVVRANPKLG VVELLLGEQDK
Sbjct: 481 RTFNQLIELGLTPDDRFCGCLLNVITQTPKGELGKLIDCVVRANPKLGFVVELLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EG+FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS
Sbjct: 541 EGNFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSLYLKGLSLGAALTALHVWI DLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLYLKGLSLGAALTALHVWIKDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 704
BLAST of HG10021662 vs. ExPASy TrEMBL
Match:
A0A6J1CNE5 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012613 PE=3 SV=1)
HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 643/704 (91.34%), Postives = 665/704 (94.46%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQD 60
MAFQLCHSPSTFF+DHH LSNSL Q + TL SS FKLNP P HSK L+ITNVSLQ+
Sbjct: 1 MAFQLCHSPSTFFSDHHPLSNSLNSQHRITLRKSSHRFKLNPTPHHSKTCLRITNVSLQE 60
Query: 61 YATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRIS 120
YA QE QNP P+ DE SKYPDGKS SSSKSSVWVNPRSPRASKLR QSYEARYASLTRIS
Sbjct: 61 YAAQEAQNPIPTQDESSKYPDGKSNSSSKSSVWVNPRSPRASKLRNQSYEARYASLTRIS 120
Query: 121 ESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAI 180
ESLDSCNPCEEDVADVLK +GSNILEQDAV VLNNMSNS TALLAL+ FQ VLKSSK+AI
Sbjct: 121 ESLDSCNPCEEDVADVLKGMGSNILEQDAVAVLNNMSNSSTALLALQMFQKVLKSSKKAI 180
Query: 181 FYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKM 240
YNVTLKV RK RDMEGAEKLF+EMLKRGVKPDNVTFST+ISCARLCSLPNKAVEWFEKM
Sbjct: 181 LYNVTLKVLRKSRDMEGAEKLFDEMLKRGVKPDNVTFSTVISCARLCSLPNKAVEWFEKM 240
Query: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNY 300
PSFDCNPDDVTYSAMIDAYGRAGNVD+AFSLYDRARTENWRIDPATFST+IKIHGVAGNY
Sbjct: 241 PSFDCNPDDVTYSAMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTLIKIHGVAGNY 300
Query: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL
Sbjct: 301 DGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASL 360
Query: 361 LRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGT 420
LRAYGR+RYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVE+F+DMKSSG
Sbjct: 361 LRAYGRARYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFEDMKSSGA 420
Query: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVV 480
CSPDSWTFSSMITIYSCSGKVSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGK KRVDDVV
Sbjct: 421 CSPDSWTFSSMITIYSCSGKVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKGKRVDDVV 480
Query: 481 RTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDK 540
RTF+RL+ELGLTPDDRFCGCLLNVITQTPKEELSKLIDCV RAN KLG VV+LLLGEQDK
Sbjct: 481 RTFDRLVELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVERANSKLGYVVKLLLGEQDK 540
Query: 541 EGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRS 600
EGD RTEASEL SVVSADVRKAYCNCLIDLCVNLDLL+KACELLDLGLTLQIY LQS S
Sbjct: 541 EGDLRTEASELLSVVSADVRKAYCNCLIDLCVNLDLLEKACELLDLGLTLQIYTGLQSTS 600
Query: 601 PTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASI 660
PTQWSL+LKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS+
Sbjct: 601 PTQWSLHLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLASV 660
Query: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 704
BLAST of HG10021662 vs. ExPASy TrEMBL
Match:
A0A6J1EHV4 (pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434309 PE=3 SV=1)
HSP 1 Score: 1273.8 bits (3295), Expect = 0.0e+00
Identity = 635/705 (90.07%), Postives = 664/705 (94.18%), Query Frame = 0
Query: 1 MAFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNS-SRLFKLNPIPRHSKPFLQITNVSLQ 60
MAFQL H PSTFFTDH NSLT KTTLC S SR+FKLNPIP HSKPFLQITNVS Q
Sbjct: 1 MAFQLSHFPSTFFTDH----NSLTFHYKTTLCKSFSRVFKLNPIPYHSKPFLQITNVSQQ 60
Query: 61 DYATQETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRI 120
+YA QET+NP+PSDDEISK+PDGKSGSSSK+SVWVNP SPRASKLRKQSYEARYASL +I
Sbjct: 61 EYAPQETRNPSPSDDEISKFPDGKSGSSSKTSVWVNPSSPRASKLRKQSYEARYASLKKI 120
Query: 121 SESLDSCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQA 180
SESLDSCNPCE DVADVLK I S ILEQDA+ VLNNMSNSQTALL RYFQDVLKSSKQA
Sbjct: 121 SESLDSCNPCEVDVADVLKRIDSKILEQDAIGVLNNMSNSQTALLVHRYFQDVLKSSKQA 180
Query: 181 IFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
+FYNVTLKVFRKCRD EGAEKLF+EML+RGVKPDNVTFSTIISCARLCSLPNKAVEWFEK
Sbjct: 181 VFYNVTLKVFRKCRDFEGAEKLFDEMLERGVKPDNVTFSTIISCARLCSLPNKAVEWFEK 240
Query: 241 MPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGN 300
MPSFDCNPD++TYS MIDAYGRAGNVD+AFSLYDRARTENWRID +TFSTMIKIHGVAGN
Sbjct: 241 MPSFDCNPDNITYSGMIDAYGRAGNVDMAFSLYDRARTENWRIDLSTFSTMIKIHGVAGN 300
Query: 301 YDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYAS 360
YDGCLNVYEEMKA+GIKPNL IYNSLL AMGRAKRPWQIKTIYKEM KNGFSPSWATYAS
Sbjct: 301 YDGCLNVYEEMKAVGIKPNLAIYNSLLAAMGRAKRPWQIKTIYKEMTKNGFSPSWATYAS 360
Query: 361 LLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSG 420
LLRAY R+RY ED +LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEA+EVF+DMKSSG
Sbjct: 361 LLRAYARARYAEDGMLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAIEVFKDMKSSG 420
Query: 421 TCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
TCSPDSWTFSSMITIYSCSG VSEAEEMLNEM+EAGFDPNIFVLTSLIQCYGKAKRVDDV
Sbjct: 421 TCSPDSWTFSSMITIYSCSGNVSEAEEMLNEMMEAGFDPNIFVLTSLIQCYGKAKRVDDV 480
Query: 481 VRTFNRLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQD 540
VRTF+RLLELGLTPDDRFCGCLLNVITQTPK ELSKLIDCV RANPKLG VV+LLLGE+D
Sbjct: 481 VRTFDRLLELGLTPDDRFCGCLLNVITQTPKHELSKLIDCVERANPKLGFVVKLLLGEKD 540
Query: 541 KEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSR 600
EGDFRTEASELFSVVS DVRKAYCNCLIDLCVNLDLLDKACELLDLGL++QIY DLQSR
Sbjct: 541 MEGDFRTEASELFSVVSDDVRKAYCNCLIDLCVNLDLLDKACELLDLGLSVQIYTDLQSR 600
Query: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHKYSDKGLAS 660
SPTQWSLYLKGLSLGAALTALHVWINDLTK L+SGEELPPLLGINTGHGKHKYSDKGL+S
Sbjct: 601 SPTQWSLYLKGLSLGAALTALHVWINDLTKELKSGEELPPLLGINTGHGKHKYSDKGLSS 660
Query: 661 IFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
+FESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESR SPELVAA
Sbjct: 661 VFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRGSPELVAA 701
BLAST of HG10021662 vs. TAIR 10
Match:
AT4G16390.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 929.5 bits (2401), Expect = 1.6e-270
Identity = 458/702 (65.24%), Postives = 566/702 (80.63%), Query Frame = 0
Query: 5 LCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQDYATQ 64
LC SPS+ D L N L+ K+T + + N HS+ LQ T+VS+Q+ Q
Sbjct: 6 LCSSPSSLLHDPLPLCNLLSVYPKSTPRSFLSSYNPNSSHFHSRNLLQATHVSVQEAIPQ 65
Query: 65 ETQNPTPSDDEISKYPDGKSGSSSKSSVWVNPRSPRASKLRKQSYEARYASLTRISESLD 124
++ D P ++SKS VWVNP+SPRAS+LR++SY++RY+SL +++ESLD
Sbjct: 66 SEKSKLVDVDLPIPEP-----TASKSYVWVNPKSPRASQLRRKSYDSRYSSLIKLAESLD 125
Query: 125 SCNPCEEDVADVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAIFYNV 184
+C P E DV DV+ G + EQDAVV LNNM+N +TA L L + +K S++ I YNV
Sbjct: 126 ACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYNV 185
Query: 185 TLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFD 244
T+KVFRK +D+E +EKLF+EML+RG+KPDN TF+TIISCAR +P +AVEWFEKM SF
Sbjct: 186 TMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG 245
Query: 245 CNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCL 304
C PD+VT +AMIDAYGRAGNVD+A SLYDRARTE WRID TFST+I+I+GV+GNYDGCL
Sbjct: 246 CEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCL 305
Query: 305 NVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAY 364
N+YEEMKA+G+KPNLVIYN L+D+MGRAKRPWQ K IYK++I NGF+P+W+TYA+L+RAY
Sbjct: 306 NIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAY 365
Query: 365 GRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPD 424
GR+RYG+DAL +Y+EMKEKGL L VILYNTLL+MCAD YV+EA E+FQDMK+ TC PD
Sbjct: 366 GRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPD 425
Query: 425 SWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFN 484
SWTFSS+IT+Y+CSG+VSEAE L +M EAGF+P +FVLTS+IQCYGKAK+VDDVVRTF+
Sbjct: 426 SWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFD 485
Query: 485 RLLELGLTPDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQD-KEGD 544
++LELG+TPDDRFCGCLLNV+TQTP EE+ KLI CV +A PKLG VV++L+ EQ+ +EG
Sbjct: 486 QVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAKPKLGQVVKMLVEEQNCEEGV 545
Query: 545 FRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKDLQSRSPTQ 604
F+ EASEL + +DV+KAY NCLIDLCVNL+ L++ACE+L LGL IY LQS+S TQ
Sbjct: 546 FKKEASELIDSIGSDVKKAYLNCLIDLCVNLNKLERACEILQLGLEYDIYTGLQSKSATQ 605
Query: 605 WSLYLKGLSLGAALTALHVWINDLTK-VLESGEELPPLLGINTGHGKHKYSDKGLASIFE 664
WSL+LK LSLGAALTALHVW+NDL++ LESGEE PPLLGINTGHGKHKYSDKGLA++FE
Sbjct: 606 WSLHLKSLSLGAALTALHVWMNDLSEAALESGEEFPPLLGINTGHGKHKYSDKGLAAVFE 665
Query: 665 SHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSPELVAA 705
SHLKELNAPFHEAP+KVGWFLTT VAAK+WLESR S V+A
Sbjct: 666 SHLKELNAPFHEAPDKVGWFLTTSVAAKAWLESRRSAGGVSA 702
BLAST of HG10021662 vs. TAIR 10
Match:
AT5G46580.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 464.9 bits (1195), Expect = 1.1e-130
Identity = 270/717 (37.66%), Postives = 411/717 (57.32%), Query Frame = 0
Query: 2 AFQLCHSPSTFFTDHHCLSNSLTPQRKTTLCNSSRLFKLNPIPRHSKPFLQITNVSLQDY 61
A +C +P T H L K +L SR KLN I+ SL+
Sbjct: 8 AIDVCFNPQNSDTKKHSLF------LKPSLFRQSRSRKLN-----------ISCSSLKQP 67
Query: 62 ATQETQNPTPSDDEISKYPDGKSGS----------SSKSSVWVNPRSPRASKLRKQ---- 121
T E + T +S+ S + S SVWVNP P+ S L Q
Sbjct: 68 KTLEEEPITTKTPSLSEQLKPLSATTLRQEQTQILSKPKSVWVNPTRPKRSVLSLQRQKR 127
Query: 122 ---SYEARYASLTRISESLDSCNPCEE-DVADVLKVIGSNILEQDAVVVLNNMSNSQTAL 181
SY + L + L+S E+ + +L I +A++VLN++ Q
Sbjct: 128 SAYSYNPQIKDLRAFALKLNSSIFTEKSEFLSLLDEIPHPPNRDNALLVLNSLREWQKTH 187
Query: 182 LALRYFQDVLKSSKQAIFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISC 241
+ + + IFYNVT+K R R + E++ EM+K GV+ DN+T+STII+C
Sbjct: 188 TFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC 247
Query: 242 ARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRID 301
A+ C+L NKA+EWFE+M PD+VTYSA++D Y ++G V+ SLY+RA W+ D
Sbjct: 248 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 307
Query: 302 PATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYK 361
FS + K+ G AG+YDG V +EMK++ +KPN+V+YN+LL+AMGRA +P ++++
Sbjct: 308 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 367
Query: 362 EMIKNGFSPSWATYASLLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVG 421
EM++ G +P+ T +L++ YG++R+ DAL +++EMK K ++ ILYNTLL MCAD+G
Sbjct: 368 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIG 427
Query: 422 YVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFDPNIFVL 481
EA +F DMK S C PD++++++M+ IY GK +A E+ EM++AG N+
Sbjct: 428 LEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGC 487
Query: 482 TSLIQCYGKAKRVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ-TPKEELSKLIDCVVR 541
T L+QC GKAKR+DDVV F+ ++ G+ PDDR CGCLL+V+ E+ K++ C+ R
Sbjct: 488 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKVMACLER 547
Query: 542 ANPKLGLVVELLLGEQDKEGDFRTEASELFSVVSADVRKAYCNCLIDLCVNLDLLDKACE 601
AN KL V L++ E+ + + E + + + R+ +CNCLID+C + ++A E
Sbjct: 548 ANKKLVTFVNLIVDEKTEYETVKEEFKLVINATQVEARRPFCNCLIDICRGNNRHERAHE 607
Query: 602 LLDLGLTLQIYKDLQSRSPTQWSLYLKGLSLGAALTALHVWINDLTKVLESGEELPPLLG 661
LL LG +Y L +++ +WSL ++ LS+GAA TAL W+ L +++ EELP L
Sbjct: 608 LLYLGTLFGLYPGLHNKTIKEWSLDVRSLSVGAAETALEEWMRTLANIIKRQEELPELFL 667
Query: 662 INTGHGKHKYSDKGLASIFESHLKELNAPFHEAPEKVGWFLTTKVAAKSWLESRSSP 700
TG G H++S +GLA+ F HL++L+APF ++ ++ G F+ TK SWLES+ P
Sbjct: 668 AQTGTGTHRFS-QGLANSFALHLQQLSAPFRQS-DRPGIFVATKEDLVSWLESKFPP 705
BLAST of HG10021662 vs. TAIR 10
Match:
AT2G31400.1 (genomes uncoupled 1 )
HSP 1 Score: 192.2 bits (487), Expect = 1.4e-48
Identity = 144/567 (25.40%), Postives = 275/567 (48.50%), Query Frame = 0
Query: 167 RYFQDVLKSSKQ--AIFYNVTLKVFRKCRDMEGAEKLFEEMLKRGVKPDNVTFSTIISCA 226
++F ++ ++ Q I +N L V + E A LF+EM R ++ D +++T++
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 227 RLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNVDLAFSLYDRARTENWRIDP 286
+ A E +MP P+ V+YS +ID + +AG D A +L+ R +D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 287 ATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQIKTIYKE 346
+++T++ I+ G + L++ EM ++GIK ++V YN+LL G+ + ++K ++ E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 347 MIKNGFSPSWATYASLLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLAMCADVGY 406
M + P+ TY++L+ Y + ++A+ +++E K GL+ +V+LY+ L+ G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 407 VNEAVEVFQDMKSSGTCSPDSWTFSSMITI------------YSCSGKVSEAEEMLNEMV 466
V AV + +M G SP+ T++S+I YS G + + L+ +
Sbjct: 565 VGSAVSLIDEMTKEG-ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 624
Query: 467 EAGFDPNIFVLTSLI---------QCYGKAKRVDDVVRTFNRLLELGLTPDDRFCGCLLN 526
E + I + L C + + ++ F ++ +L + P+ +LN
Sbjct: 625 ETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 684
Query: 527 VITQTPK-EELSKLIDCV-VRANPKLGLVVELLLGEQDKEGDFRTEASELFSVVS---AD 586
++ E+ S L++ + + N G+V LL+G+++ + +A LF V+
Sbjct: 685 ACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRE---NVWLQAQSLFDKVNEMDGS 744
Query: 587 VRKAYCNCLIDLCVNLDLLDKACELLDL-GLTLQIYKDLQSRSPTQWSLYLKGLSLGAAL 646
A+ N L D+ + + EL+ L G + Q+++++ S S L L +S GAA
Sbjct: 745 TASAFYNALTDMLWHFG-QKRGAELVALEGRSRQVWENVWSDS----CLDLHLMSSGAAR 804
Query: 647 TALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASIFESHLKELNAPFHEA 703
+H W+ ++ ++ G ELP +L I TG GKH D L E L+ ++APFH +
Sbjct: 805 AMVHAWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLS 864
BLAST of HG10021662 vs. TAIR 10
Match:
AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 166.0 bits (419), Expect = 1.1e-40
Identity = 100/350 (28.57%), Postives = 177/350 (50.57%), Query Frame = 0
Query: 164 LALRYFQDVLKSSK-QAIFYNVTLKVFRKCRDMEG----AEKLFEEMLKRGVKPDNVTFS 223
LALR F +K Q++ N + + EG A +F + + G D +++
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 224 TIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSAMIDAYGRAGNV-DLAFSLYDRART 283
++IS +AV F+KM C P +TY+ +++ +G+ G + SL ++ ++
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 284 ENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVIYNSLLDAMGRAKRPWQ 343
+ D T++T+I + V+EEMKA G + V YN+LLD G++ RP +
Sbjct: 273 DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 344 IKTIYKEMIKNGFSPSWATYASLLRAYGRSRYGEDALLVYKEMKEKGLQLNVILYNTLLA 403
+ EM+ NGFSPS TY SL+ AY R ++A+ + +M EKG + +V Y TLL+
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 404 MCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITIYSCSGKVSEAEEMLNEMVEAGFD 463
G V A+ +F++M+++G C P+ TF++ I +Y GK +E ++ +E+ G
Sbjct: 393 GFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 452
Query: 464 PNIFVLTSLIQCYGKAKRVDDVVRTFNRLLELGLTPDDRFCGCLLNVITQ 508
P+I +L+ +G+ +V F + G P+ L++ ++
Sbjct: 453 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
BLAST of HG10021662 vs. TAIR 10
Match:
AT1G18900.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 158.3 bits (399), Expect = 2.3e-38
Identity = 133/567 (23.46%), Postives = 244/567 (43.03%), Query Frame = 0
Query: 135 DVLKVIGSNILEQDAVVVLNNMSNSQTALLALRYFQDVLKSSKQAIFYNVTLKVFRKCRD 194
+ L+ +G I A VL M++ AL + + Y + + +
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 195 MEGAEKLFEEMLKRGVKPDNVTFSTIISCARLCSLPNKAVEWFEKMPSFDCNPDDVTYSA 254
KL +EM++ G +P+ VT++ +I + N+A+ F +M C PD VTY
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 255 MIDAYGRAGNVDLAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIG 314
+ID + +AG +D+A +Y R + D T+S +I G AG+ ++ EM G
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 315 IKPNLVIYNSLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRSRYGEDAL 374
PNLV YN ++D +A+ +Y++M GF P TY+ ++ G Y E+A
Sbjct: 500 CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAE 559
Query: 375 LVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEVFQDMKSSGTCSPDSWTFSSMITI 434
V+ EM++K + +Y L+ + G V +A + +Q M +G P+ T +S+++
Sbjct: 560 AVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG-LRPNVPTCNSLLST 619
Query: 435 YSCSGKVSEAEEMLNEMVEAGFDPNIFVLTSLIQCY--GKAKRVDDVVRTFNRLLELGLT 494
+ K++EA E+L M+ G P++ T L+ C G++K L++G
Sbjct: 620 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSK------------LDMG-- 679
Query: 495 PDDRFCGCLLNVITQTPKEELSKLIDCVVRANPKLGLVVELLLGEQDKEGDFRTEASELF 554
FCG L+ +P ++++ D E + R A+
Sbjct: 680 ----FCGQLM-----------------ASTGHPAHMFLLKMPAAGPDGE-NVRNHANNFL 739
Query: 555 SVVSADVR---KAYCNCLIDLCVNLDLLDKACELLDLGLTLQIYKD-LQSRSPTQWSLYL 614
++ ++ R + + ++D ++A + ++ ++ D L+ +S + W + L
Sbjct: 740 DLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALREKSCSYWLINL 799
Query: 615 KGLSLGAALTALHVWINDLTKVLESGEELPPLLGINTGHGKHK--YSDKGLASIFESHLK 674
+S G A+TAL + K + + P + I TG G+ + E L
Sbjct: 800 HVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDIVTGWGRRSRVTGTSMVRQAVEELLN 849
Query: 675 ELNAPFHEAPEKVGWFLTTKVAAKSWL 694
+PF G F+ + WL
Sbjct: 860 IFGSPFFTESGNSGCFVGSGEPLNRWL 849
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038877791.1 | 0.0e+00 | 96.88 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Benincasa ... | [more] |
| XP_008464281.1 | 0.0e+00 | 94.46 | PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic ... | [more] |
| XP_004139516.1 | 0.0e+00 | 93.61 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Cucumis sa... | [more] |
| XP_022142513.1 | 0.0e+00 | 91.34 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Momordica ... | [more] |
| KAG6583722.1 | 0.0e+00 | 90.21 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q8GWE0 | 2.3e-269 | 65.24 | Pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Arabidop... | [more] |
| Q10PZ4 | 1.9e-207 | 55.27 | Pentatricopeptide repeat-containing protein ATP4 homolog, chloroplastic OS=Oryza... | [more] |
| B4F8Z1 | 5.5e-207 | 53.60 | Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays OX=4... | [more] |
| Q9LS25 | 1.6e-129 | 37.66 | Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidop... | [more] |
| Q9SIC9 | 2.0e-47 | 25.40 | Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7TLM5 | 0.0e+00 | 94.46 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3CL39 | 0.0e+00 | 94.46 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucumis ... | [more] |
| A0A0A0LVP1 | 0.0e+00 | 93.61 | Smr domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G173140 PE=3 SV... | [more] |
| A0A6J1CNE5 | 0.0e+00 | 91.34 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Momordic... | [more] |
| A0A6J1EHV4 | 0.0e+00 | 90.07 | pentatricopeptide repeat-containing protein At4g16390, chloroplastic OS=Cucurbit... | [more] |
