HG10020467 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10020467
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	pentatricopeptide repeat-containing protein At1g09900-like
Location	Chr04: 32069690 .. 32071201 (-)
RNA-Seq Expression	HG10020467
Synteny	HG10020467

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTATGAGCTTCTCATCCAATCATCTCTGCAAAATCAATCTTTCCTTCCTTTGAAATCCAAACATAAGCGAATGCGTCTCCGTCTCCCCCTTCGCCCCTCTTTCCTCACAACTCTTCCACTCTCTTCCACATATACGCCTTTCGGTGCCAACTTGTTTGAAGAAAACAGCAGGCTAAGCACGAATAAACAATCCCATTCCATCCATACTGCCCTCCGTAGTTTCACTCCCACTAGAATCACGAGAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAACACACTGAGATTCGAAACATATCTGAATTCAATGACCTGTTCATGGATTTCGTCTCAGAAAATGAGCTCCATCTTGCCCTGAAACTGTTGTCCAATATATCATCTTATGGTTTGGTCCCAAATTCTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGAATTGGATAATGCGGGCAGGGTTTTAGAGCAAATGCTGGGAAGGGGTCATTACCCAAACGATGCCACCGTCGCATTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAAGCTTTAGAAATGGTTGAGGTGGTGGGAAGGATTGGACGCAAGCCGACAGTTAAGACATACAATTGTTTGTTGAAAGGCCTATGCTATGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGACATTTACACCTATACGGCTCTTATGGATGGCTTGTGTAAGGTAGGGCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTAGTCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCAGTGGATGGAATCTATGTCTTGAACAAAATGAAGCAAATGAACTGTATGCCCGATCGCATTACTTACACTACTCTGCTACATGGGCTGATAAAATGGGGTAAAATCCGAATAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGTCACACCATCGAAGCAAAAATGATGAATACCTTCATGAGAGCGTTAAGCAAGAGATCTTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAAGACGACTTTCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACATGATTTCAGAGGCTCTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCAATTACCATTGATGTTGTTGTTCAATCGCTTTGTCACACTCACAGCCACACGGGAAGCGCCAATGAAGCATTGTGTCTTTTGGGGCATGGAATCCCTTTCAGTACAACTTCTTTCGACTTGATAATCAATGAGCTAAATAAACAAGGAATGCGGTTAAGTGCTTCTAATGTATATGGTTTGGCTCTGAAACGAGGTGTTAACCCCACGAAAACCCCGAGATAA

mRNA sequence

ATGCCTTATGAGCTTCTCATCCAATCATCTCTGCAAAATCAATCTTTCCTTCCTTTGAAATCCAAACATAAGCGAATGCGTCTCCGTCTCCCCCTTCGCCCCTCTTTCCTCACAACTCTTCCACTCTCTTCCACATATACGCCTTTCGGTGCCAACTTGTTTGAAGAAAACAGCAGGCTAAGCACGAATAAACAATCCCATTCCATCCATACTGCCCTCCGTAGTTTCACTCCCACTAGAATCACGAGAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAACACACTGAGATTCGAAACATATCTGAATTCAATGACCTGTTCATGGATTTCGTCTCAGAAAATGAGCTCCATCTTGCCCTGAAACTGTTGTCCAATATATCATCTTATGGTTTGGTCCCAAATTCTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGAATTGGATAATGCGGGCAGGGTTTTAGAGCAAATGCTGGGAAGGGGTCATTACCCAAACGATGCCACCGTCGCATTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAAGCTTTAGAAATGGTTGAGGTGGTGGGAAGGATTGGACGCAAGCCGACAGTTAAGACATACAATTGTTTGTTGAAAGGCCTATGCTATGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGACATTTACACCTATACGGCTCTTATGGATGGCTTGTGTAAGGTAGGGCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTAGTCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCAGTGGATGGAATCTATGTCTTGAACAAAATGAAGCAAATGAACTGTATGCCCGATCGCATTACTTACACTACTCTGCTACATGGGCTGATAAAATGGGGTAAAATCCGAATAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGTCACACCATCGAAGCAAAAATGATGAATACCTTCATGAGAGCGTTAAGCAAGAGATCTTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAAGACGACTTTCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACATGATTTCAGAGGCTCTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCAATTACCATTGATGTTGTTGTTCAATCGCTTTGTCACACTCACAGCCACACGGGAAGCGCCAATGAAGCATTGTGTCTTTTGGGGCATGGAATCCCTTTCAGTACAACTTCTTTCGACTTGATAATCAATGAGCTAAATAAACAAGGAATGCGGTTAAGTGCTTCTAATGTATATGGTTTGGCTCTGAAACGAGGTGTTAACCCCACGAAAACCCCGAGATAA

Coding sequence (CDS)

ATGCCTTATGAGCTTCTCATCCAATCATCTCTGCAAAATCAATCTTTCCTTCCTTTGAAATCCAAACATAAGCGAATGCGTCTCCGTCTCCCCCTTCGCCCCTCTTTCCTCACAACTCTTCCACTCTCTTCCACATATACGCCTTTCGGTGCCAACTTGTTTGAAGAAAACAGCAGGCTAAGCACGAATAAACAATCCCATTCCATCCATACTGCCCTCCGTAGTTTCACTCCCACTAGAATCACGAGAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAACACACTGAGATTCGAAACATATCTGAATTCAATGACCTGTTCATGGATTTCGTCTCAGAAAATGAGCTCCATCTTGCCCTGAAACTGTTGTCCAATATATCATCTTATGGTTTGGTCCCAAATTCTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGAATTGGATAATGCGGGCAGGGTTTTAGAGCAAATGCTGGGAAGGGGTCATTACCCAAACGATGCCACCGTCGCATTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAAGCTTTAGAAATGGTTGAGGTGGTGGGAAGGATTGGACGCAAGCCGACAGTTAAGACATACAATTGTTTGTTGAAAGGCCTATGCTATGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGACATTTACACCTATACGGCTCTTATGGATGGCTTGTGTAAGGTAGGGCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTAGTCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCAGTGGATGGAATCTATGTCTTGAACAAAATGAAGCAAATGAACTGTATGCCCGATCGCATTACTTACACTACTCTGCTACATGGGCTGATAAAATGGGGTAAAATCCGAATAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGTCACACCATCGAAGCAAAAATGATGAATACCTTCATGAGAGCGTTAAGCAAGAGATCTTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAAGACGACTTTCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACATGATTTCAGAGGCTCTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCAATTACCATTGATGTTGTTGTTCAATCGCTTTGTCACACTCACAGCCACACGGGAAGCGCCAATGAAGCATTGTGTCTTTTGGGGCATGGAATCCCTTTCAGTACAACTTCTTTCGACTTGATAATCAATGAGCTAAATAAACAAGGAATGCGGTTAAGTGCTTCTAATGTATATGGTTTGGCTCTGAAACGAGGTGTTAACCCCACGAAAACCCCGAGATAA

Protein sequence

MPYELLIQSSLQNQSFLPLKSKHKRMRLRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFTPTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGLALKRGVNPTKTPR

Homology

[Close]

BLAST of HG10020467 vs. NCBI nr
Match: XP_038904608.1 (pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida])

HSP 1 Score: 806.2 bits (2081), Expect = 1.6e-229
Identity = 413/490 (84.29%), Postives = 429/490 (87.55%), Query Frame = 0


Query: 28  LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 87
           + L L PSF TT PLS TYTPF AN   E SRLS NKQSHSI T   SFT          
Sbjct: 1   MHLALPPSFFTTRPLSYTYTPFAANFCGEYSRLSANKQSHSIDTGQHSFTHNAHASPFKL 60

Query: 88  ----PTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLL 147
               PTR+TRIKSLPIPSEEGTEIFIMSQK TEIRN+SEFND  MDFVSENEL LALKLL
Sbjct: 61  EIEIPTRVTRIKSLPIPSEEGTEIFIMSQKRTEIRNVSEFNDRLMDFVSENELDLALKLL 120

Query: 148 SNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKR 207
           SNISSYGLVPNSRTFSIMIR YCKKGEL+ AG+VLEQM+GRGH PNDATV  LVNAFCKR
Sbjct: 121 SNISSYGLVPNSRTFSIMIRGYCKKGELETAGKVLEQMVGRGHNPNDATVTVLVNAFCKR 180

Query: 208 GKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTY 267
           GKTQKALEMVE+VGRIGRKPTV+TYNCLLKGLCYVGRVEEACEMVTEMKKD LIPDIYTY
Sbjct: 181 GKTQKALEMVEMVGRIGRKPTVQTYNCLLKGLCYVGRVEEACEMVTEMKKDRLIPDIYTY 240

Query: 268 TALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ 327
           TALMDGLCKVGRSDEAMELL EAE NGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ
Sbjct: 241 TALMDGLCKVGRSDEAMELLIEAEGNGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ 300

Query: 328 MNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEK 387
           +NC PDRITYTTLLHGLIKWGKIRIAL TYKEMVSSGHTIEAKMMNTFMRAL +RSW EK
Sbjct: 301 INCTPDRITYTTLLHGLIKWGKIRIALSTYKEMVSSGHTIEAKMMNTFMRALCRRSWNEK 360

Query: 388 DLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITI 447
           DLLEDAHQVFEKMKDD+QVID+STYGLLIQALCSGNMISEALANLHHMI KGYSPRAI I
Sbjct: 361 DLLEDAHQVFEKMKDDYQVIDQSTYGLLIQALCSGNMISEALANLHHMIEKGYSPRAIII 420

Query: 448 DVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGLALK 504
           DVVVQ+LC    H GS +EAL +LGHGIPF   SFDLII+ELNKQ MR SA NVYGLALK
Sbjct: 421 DVVVQTLC----HRGSVDEALLVLGHGIPFRRFSFDLIIDELNKQEMRFSACNVYGLALK 480

[Close]

BLAST of HG10020467 vs. NCBI nr
Match: XP_022982589.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 768.8 bits (1984), Expect = 2.8e-218
Identity = 394/496 (79.44%), Postives = 426/496 (85.89%), Query Frame = 0


Query: 28  LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 87
           +RL LRPSFLTTLPLSST TPFGAN  E N R S NK+ HS+     SF           
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60

Query: 88  ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 147
               PTR+T      RIKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 148 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 207
           LALKLLSN++SYGLVPNSRTFSIMIRCYCKKG+LDNA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180

Query: 208 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 267
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 268 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 327
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 328 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 387
           L KMKQMNC PDRI+Y+TLLHGLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 388 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 447
           R+WKEKDLLEDAHQVFEKMK++FQVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 448 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 504
           P AITIDV+VQ+LC    H+GSA+EALC+LGHGI FS  SFDLII ELN++GM LSA +V
Sbjct: 421 PWAITIDVMVQALC----HSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSV 480

[Close]

BLAST of HG10020467 vs. NCBI nr
Match: KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 766.5 bits (1978), Expect = 1.4e-217
Identity = 391/496 (78.83%), Postives = 424/496 (85.48%), Query Frame = 0


Query: 28  LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 87
           +R+ LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60

Query: 88  ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 147
               PTR+T       IKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 148 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 207
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 208 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 267
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 268 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 327
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 328 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 387
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 388 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 447
           R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 448 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 504
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDLII ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNV 480

[Close]

BLAST of HG10020467 vs. NCBI nr
Match: XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])

HSP 1 Score: 766.1 bits (1977), Expect = 1.8e-217
Identity = 390/496 (78.63%), Postives = 424/496 (85.48%), Query Frame = 0


Query: 28  LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 87
           +R+ LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60

Query: 88  ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 147
               PTR+T       IKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 148 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 207
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 208 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 267
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 268 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 327
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 328 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 387
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 388 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 447
           R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 448 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 504
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDL+I ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNV 480

[Close]

BLAST of HG10020467 vs. NCBI nr
Match: KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 764.6 bits (1973), Expect = 5.3e-217
Identity = 391/496 (78.83%), Postives = 421/496 (84.88%), Query Frame = 0


Query: 28  LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 87
           +RL LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60

Query: 88  ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 147
               PTR+T       IKSLPIPSEEGTEIF MSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 148 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 207
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+LDNA RVL QMLG G  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180

Query: 208 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 267
           NAFCKRGK QKA EMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 268 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 327
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 328 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 387
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 388 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 447
           RSWKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 448 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 504
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDLII ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNV 480

[Close]

BLAST of HG10020467 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-46
Identity = 112/372 (30.11%), Postives = 183/372 (49.19%), Query Frame = 0


Query: 113 FNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQML 172
           +N +     S  +L LALK+L+ + S    P   T++I+I     +G +D A +++++ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 173 GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVE 232
            RG  P+  T   ++   CK G   +A EMV  +   G +P V +YN LL+ L   G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315

Query: 233 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLF 292
           E  +++T+M  +   P++ TY+ L+  LC+ G+ +EAM LL   +E GL P   +++ L 
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 293 NGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHT 352
             +C+EGR    I  L  M    C+PD + Y T+L  L K GK   AL  + ++   G +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 353 IEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMIS 412
             +   NT   AL    W   D +   H + E M +     D  TY  +I  LC   M+ 
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495

Query: 413 EALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLII 472
           EA   L  M    + P  +T ++V+   C  H    + N    ++G+G   + T++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555

Query: 473 NELNKQGMRLSA 485
             +   G R  A
Sbjct: 556 EGIGFAGYRAEA 562

[Close]

BLAST of HG10020467 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.0e-46
Identity = 115/428 (26.87%), Postives = 201/428 (46.96%), Query Frame = 0


Query: 103 KHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELD 162
           KH  + N   +  L       N ++ AL+LL  +   G VP++ TF+ +I   CK   ++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304

Query: 163 NAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV------------------- 222
            A +++ +ML RG  P+D T  +L+N  CK G+   A ++                    
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364

Query: 223 -------------EVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDI 282
                        ++V   G  P V TYN L+ G    G V  A E++ +M+     P++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424

Query: 283 YTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNK 342
           Y+YT L+DG CK+G+ DEA  +LNE   +GLKP+ V FN L + +CKE R  + + +  +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484

Query: 343 MKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSW 402
           M +  C PD  T+ +L+ GL +  +I+ AL   ++M+S G        NT + A  +R  
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG- 544

Query: 403 KEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRA 462
                +++A ++  +M      +D  TY  LI+ LC    + +A +    M+  G++P  
Sbjct: 545 ----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604

Query: 463 ITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGL 499
           I+ ++++  LC +     +      ++  G      +F+ +IN L + G       ++  
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664

[Close]

BLAST of HG10020467 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-44
Identity = 113/367 (30.79%), Postives = 182/367 (49.59%), Query Frame = 0


Query: 109 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 168
           N+  +N L   +    ++    KLL +++  GL PN  +++++I   C++G +     VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298

Query: 169 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 228
            +M  RG+  ++ T   L+  +CK G   +AL M   + R G  P+V TY  L+  +C  
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 229 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 288
           G +  A E + +M+   L P+  TYT L+DG  + G  +EA  +L E  +NG  PSVVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 289 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 348
           N L NG+C  G+  D I VL  MK+    PD ++Y+T+L G  +   +  ALR  +EMV 
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 349 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 408
            G   +    ++ ++        E+   ++A  ++E+M       D  TY  LI A C  
Sbjct: 479 KGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 538

Query: 409 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGH--GIPFSTT 468
             + +AL   + M+ KG  P  +T  V++  L +  S T  A   L  L +   +P   T
Sbjct: 539 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGL-NKQSRTREAKRLLLKLFYEESVPSDVT 598

Query: 469 SFDLIIN 474
              LI N
Sbjct: 599 YHTLIEN 599

[Close]

BLAST of HG10020467 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.5e-44
Identity = 108/391 (27.62%), Postives = 195/391 (49.87%), Query Frame = 0


Query: 109 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 168
           ++S FN L       ++L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++G+LD A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 169 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV-EVVGRIGRKPTVKTYNCLLKGLCY 228
           EQM+  G   ++ +V  +V+ FCK G+ + AL  + E+  + G  P   T+N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 229 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVT 288
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L++       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 289 FNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMV 348
           +NTL +  CKE +  +   +   +     +PD  T+ +L+ GL      R+A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 349 SSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCS 408
           S G   +    N  + +L       K  L++A  + ++M+         TY  LI   C 
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 487

Query: 409 GNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTS 468
            N   EA      M   G S  ++T + ++  LC +     +A     ++  G      +
Sbjct: 488 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 547

Query: 469 FDLIINELNKQGMRLSASNVYGLALKRGVNP 499
           ++ ++    + G    A+++       G  P
Sbjct: 548 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

[Close]

BLAST of HG10020467 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 8.1e-43
Identity = 106/368 (28.80%), Postives = 174/368 (47.28%), Query Frame = 0


Query: 112 EFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQM 171
           E N+     V   EL    K L N+  +G VP+    + +IR +C+ G+   A ++LE +
Sbjct: 104 ESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163

Query: 172 LGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRV 231
            G G  P+  T   +++ +CK G+   AL    V+ R+   P V TYN +L+ LC  G++
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLCDSGKL 223

Query: 232 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTL 291
           ++A E++  M +    PD+ TYT L++  C+      AM+LL+E  + G  P VVT+N L
Sbjct: 224 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 283

Query: 292 FNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGH 351
            NG CKEGR  + I  LN M    C P+ IT+  +L  +   G+   A +   +M+  G 
Sbjct: 284 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 343

Query: 352 TIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMI 411
           +      N  +  L +     K LL  A  + EKM       +  +Y  L+   C    +
Sbjct: 344 SPSVVTFNILINFLCR-----KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 403

Query: 412 SEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLI 471
             A+  L  M+ +G  P  +T + ++ +LC       +      L   G      +++ +
Sbjct: 404 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 463

Query: 472 INELNKQG 480
           I+ L K G
Sbjct: 464 IDGLAKAG 463

[Close]

BLAST of HG10020467 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.4e-218
Identity = 394/496 (79.44%), Postives = 426/496 (85.89%), Query Frame = 0


Query: 28  LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 87
           +RL LRPSFLTTLPLSST TPFGAN  E N R S NK+ HS+     SF           
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60

Query: 88  ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 147
               PTR+T      RIKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 148 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 207
           LALKLLSN++SYGLVPNSRTFSIMIRCYCKKG+LDNA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180

Query: 208 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 267
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 268 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 327
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 328 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 387
           L KMKQMNC PDRI+Y+TLLHGLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 388 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 447
           R+WKEKDLLEDAHQVFEKMK++FQVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 448 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 504
           P AITIDV+VQ+LC    H+GSA+EALC+LGHGI FS  SFDLII ELN++GM LSA +V
Sbjct: 421 PWAITIDVMVQALC----HSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSV 480

[Close]

BLAST of HG10020467 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 8.8e-218
Identity = 390/496 (78.63%), Postives = 424/496 (85.48%), Query Frame = 0


Query: 28  LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 87
           +R+ LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60

Query: 88  ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 147
               PTR+T       IKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 148 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 207
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 208 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 267
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 268 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 327
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 328 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 387
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 388 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 447
           R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 448 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 504
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDL+I ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNV 480

[Close]

BLAST of HG10020467 vs. ExPASy TrEMBL
Match: A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 9.5e-196
Identity = 363/494 (73.48%), Postives = 397/494 (80.36%), Query Frame = 0


Query: 40  LPLSSTYTPFGANLFEENSRLSTNKQSHS---------------IHTALRSFTPTRIT-- 99
           LPLSST      N  EEN RLS NKQSHS               +   L    P RIT  
Sbjct: 9   LPLSST----SVNFIEENGRLSPNKQSHSNRNRGPGFGGDNVYALPFKLEIENPRRITVK 68

Query: 100 ----RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLLSNISS 159
               RI SLP PS+EGTE+FI SQK  EI+NISEFNDLF DFVS  EL LAL+LLSNISS
Sbjct: 69  NEAGRIGSLPTPSKEGTEMFITSQKDCEIQNISEFNDLFADFVSAEELDLALRLLSNISS 128

Query: 160 YGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQK 219
           YGLVPNSRTFSI IRCYCKKG+LDNA RV +QMLG G  PNDATV  LVNA C+RGK ++
Sbjct: 129 YGLVPNSRTFSIAIRCYCKKGDLDNAKRVFDQMLGSGCNPNDATVTVLVNALCRRGKIKR 188

Query: 220 ALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMD 279
           ALEMVE+VGRIGRK TV+TYNCLLKGLCYVGRVEEACEMV +MKKD L+PDIYTYTALMD
Sbjct: 189 ALEMVELVGRIGRKQTVRTYNCLLKGLCYVGRVEEACEMVAKMKKDGLVPDIYTYTALMD 248

Query: 280 GLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQMNCMP 339
           GLCKVGRSDEAMELLNEAEENGL+PSVVTFNTLFNGYCKEGRP+DGI+VL KMKQMNCMP
Sbjct: 249 GLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNCMP 308

Query: 340 DRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEKDLLED 399
           DRI+YTTLLHGLIKWGKIR ALRTYKEMVSSGH++E KMMNTFMRAL +RSWKEKDLLED
Sbjct: 309 DRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLLED 368

Query: 400 AHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITIDVVVQ 459
           AHQVFEKMK++FQVI RSTYG++I ALCSGN ISEA+ANLHHMI KGYSPRAITI+VVV+
Sbjct: 369 AHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRAITINVVVE 428

Query: 460 SLCHTHSHTGSANEALCLLG---------HGIPFSTTSFDLIINELNKQGMRLSASNVYG 504
           +LC      GS NEAL ++G         H IPFS  S+DLII+ELNKQGM   A  VYG
Sbjct: 429 ALC----RRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDACKVYG 488

[Close]

BLAST of HG10020467 vs. ExPASy TrEMBL
Match: A0A2I4EIR4 (pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108989956 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 4.6e-134
Identity = 259/455 (56.92%), Postives = 328/455 (72.09%), Query Frame = 0


Query: 56  ENSRLSTNKQSHSIHTALRSF-TPTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFN 115
           ++S L    ++H +     SF  P  +  I SL  P+EE TE      K TE R IS FN
Sbjct: 78  KHSHLIYVNRNHLVDPRTSSFQVPDFVGTIGSL--PTEERTEFLTAYIKDTEFRTISNFN 137

Query: 116 DLFMDFVSENELHLALKLLSNISSYGLV-PNSRTFSIMIRCYCKKGELDNAGRVLEQML- 175
           DL M  +   E  LALKL S++SSY  + P+S TFSI+ RCYCKK  LD A RVL+ M+ 
Sbjct: 138 DLLMALLIAEEPDLALKLFSDLSSYASIEPDSWTFSIVSRCYCKKNHLDEAQRVLDHMVE 197

Query: 176 GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVE 235
            RG +P+ AT+  L+N FCKRGK Q+A E++  +GRIG +PTV+TYNCLLKG+CYVGRVE
Sbjct: 198 ERGFHPDVATITMLINGFCKRGKLQRAFELLHFMGRIGCEPTVRTYNCLLKGMCYVGRVE 257

Query: 236 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLF 295
           EA EM+ ++ K+S+ PDIYTYTA+MDG CKVGRSDEAMELL+EAEE GL P+VV++NTLF
Sbjct: 258 EAFEMLIKI-KESMKPDIYTYTAVMDGFCKVGRSDEAMELLDEAEEMGLTPNVVSYNTLF 317

Query: 296 NGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHT 355
            GYCKEGRP++GI VL +MKQ NCMPD I Y+TLLHGL+KWGKIR ALRTYKEMV  G  
Sbjct: 318 QGYCKEGRPLEGIGVLKQMKQRNCMPDYICYSTLLHGLLKWGKIRSALRTYKEMVGDGFE 377

Query: 356 IEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMIS 415
           ++ +MMNTF+R L +RSWKEKD+LEDA+QVFEKMK  F VID STY L+IQALC+G  I 
Sbjct: 378 VDERMMNTFLRRLCRRSWKEKDMLEDAYQVFEKMKKRFYVIDLSTYSLMIQALCTGKKIE 437

Query: 416 EALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLL-----GHGIPFSTTS 475
           +AL NLH MI  G+SP  IT + ++++LC      G  +EAL +L     G  +P +  S
Sbjct: 438 QALDNLHDMIRMGHSPPIITFNSIIRALC----AGGRVDEALLVLALMDEGRRMP-NRIS 497

Query: 476 FDLIINELNKQGMRLSASNVYGLALKRGVNPTKTP 503
           ++L+I ELN++   L A N+YG+ALKRGV P + P
Sbjct: 498 YNLLIEELNRRKWLLGACNIYGMALKRGVIPNRKP 524

[Close]

BLAST of HG10020467 vs. ExPASy TrEMBL
Match: A0A5N6RKM0 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 9.7e-132
Identity = 259/478 (54.18%), Postives = 330/478 (69.04%), Query Frame = 0


Query: 32  LRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFTPTRITRIKSLPIPS 91
           L P    +LPL+  +     ++   +S  +T   +   H  ++ F  T    I+ L  P+
Sbjct: 2   LHPPHSFSLPLNPLH-----SIAISSSATATEAATIREHDMVKYFIDT----IRGL--PT 61

Query: 92  EEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIM 151
           +  TE      K  E R +S+FNDL M      E  LAL+L S++SSYG  P+S T SI+
Sbjct: 62  KGRTEFLSTFFKDREFRTVSDFNDLVMALFIAEEPDLALELFSDMSSYGFEPDSWTLSIV 121

Query: 152 IRCYCKKGELDNAGRVLEQML-GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIG 211
            RCYCKK  LD A RVL+QM+  +G +P+ ATV  L+N FCKRG+ Q+A E+ + +GRIG
Sbjct: 122 SRCYCKKNHLDEAKRVLDQMVEEKGFHPDVATVTILINGFCKRGRLQRAFEVFDFMGRIG 181

Query: 212 RKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAM 271
            KPTV+TYNCLLKGLC+VGRVEEA EM+ ++KKDS+ PDIYTYTA+MDG CKVGRSDEA+
Sbjct: 182 CKPTVQTYNCLLKGLCFVGRVEEAFEMLIKIKKDSVKPDIYTYTAVMDGFCKVGRSDEAV 241

Query: 272 ELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGL 331
           ELL+EA E GL P+VVT+NTLFNGYCKEGRP+ GI VL +MKQ NCMPD ITY+TLLHGL
Sbjct: 242 ELLDEAVEMGLTPNVVTYNTLFNGYCKEGRPLKGIGVLKQMKQRNCMPDYITYSTLLHGL 301

Query: 332 IKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDF 391
           +KWGKIR ALRTYKEMV  G   + +MMNT +R L KRSWKEKDLLE+A+Q+FEKMK+ F
Sbjct: 302 LKWGKIRSALRTYKEMVGDGFEADERMMNTLLRGLCKRSWKEKDLLENAYQLFEKMKNGF 361

Query: 392 QVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSA 451
            VID STYGL+++ALC G    EAL NLH     G+SP  IT + V+++LC      G  
Sbjct: 362 YVIDLSTYGLMVKALCVGEKTEEALDNLHDFTRMGHSPHIITFNSVIRALC----AEGRV 421

Query: 452 NEALCLL-----GHGIPFSTTSFDLIINELNKQGMRLSASNVYGLALKRGVNPTKTPR 504
           +EAL +L     G  IP +  S++L+I E N++   L A N+YG ALKRGV P + PR
Sbjct: 422 DEALLVLILMDEGRRIP-NRISYNLLIEECNRRKWLLGACNIYGAALKRGVIPDRKPR 463

[Close]

BLAST of HG10020467 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 8.6e-48
Identity = 112/372 (30.11%), Postives = 183/372 (49.19%), Query Frame = 0


Query: 113 FNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQML 172
           +N +     S  +L LALK+L+ + S    P   T++I+I     +G +D A +++++ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 173 GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVE 232
            RG  P+  T   ++   CK G   +A EMV  +   G +P V +YN LL+ L   G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315

Query: 233 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLF 292
           E  +++T+M  +   P++ TY+ L+  LC+ G+ +EAM LL   +E GL P   +++ L 
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 293 NGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHT 352
             +C+EGR    I  L  M    C+PD + Y T+L  L K GK   AL  + ++   G +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 353 IEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMIS 412
             +   NT   AL    W   D +   H + E M +     D  TY  +I  LC   M+ 
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495

Query: 413 EALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLII 472
           EA   L  M    + P  +T ++V+   C  H    + N    ++G+G   + T++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555

Query: 473 NELNKQGMRLSA 485
             +   G R  A
Sbjct: 556 EGIGFAGYRAEA 562

[Close]

BLAST of HG10020467 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 4.2e-47
Identity = 115/428 (26.87%), Postives = 201/428 (46.96%), Query Frame = 0


Query: 103 KHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELD 162
           KH  + N   +  L       N ++ AL+LL  +   G VP++ TF+ +I   CK   ++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304

Query: 163 NAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV------------------- 222
            A +++ +ML RG  P+D T  +L+N  CK G+   A ++                    
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364

Query: 223 -------------EVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDI 282
                        ++V   G  P V TYN L+ G    G V  A E++ +M+     P++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424

Query: 283 YTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNK 342
           Y+YT L+DG CK+G+ DEA  +LNE   +GLKP+ V FN L + +CKE R  + + +  +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484

Query: 343 MKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSW 402
           M +  C PD  T+ +L+ GL +  +I+ AL   ++M+S G        NT + A  +R  
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG- 544

Query: 403 KEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRA 462
                +++A ++  +M      +D  TY  LI+ LC    + +A +    M+  G++P  
Sbjct: 545 ----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604

Query: 463 ITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGL 499
           I+ ++++  LC +     +      ++  G      +F+ +IN L + G       ++  
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664

[Close]

BLAST of HG10020467 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 8.0e-46
Identity = 113/367 (30.79%), Postives = 182/367 (49.59%), Query Frame = 0


Query: 109 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 168
           N+  +N L   +    ++    KLL +++  GL PN  +++++I   C++G +     VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298

Query: 169 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 228
            +M  RG+  ++ T   L+  +CK G   +AL M   + R G  P+V TY  L+  +C  
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 229 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 288
           G +  A E + +M+   L P+  TYT L+DG  + G  +EA  +L E  +NG  PSVVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 289 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 348
           N L NG+C  G+  D I VL  MK+    PD ++Y+T+L G  +   +  ALR  +EMV 
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 349 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 408
            G   +    ++ ++        E+   ++A  ++E+M       D  TY  LI A C  
Sbjct: 479 KGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 538

Query: 409 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGH--GIPFSTT 468
             + +AL   + M+ KG  P  +T  V++  L +  S T  A   L  L +   +P   T
Sbjct: 539 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGL-NKQSRTREAKRLLLKLFYEESVPSDVT 598

Query: 469 SFDLIIN 474
              LI N
Sbjct: 599 YHTLIEN 599

[Close]

BLAST of HG10020467 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-45
Identity = 108/391 (27.62%), Postives = 195/391 (49.87%), Query Frame = 0


Query: 109 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 168
           ++S FN L       ++L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++G+LD A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 169 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV-EVVGRIGRKPTVKTYNCLLKGLCY 228
           EQM+  G   ++ +V  +V+ FCK G+ + AL  + E+  + G  P   T+N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 229 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVT 288
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L++       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 289 FNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMV 348
           +NTL +  CKE +  +   +   +     +PD  T+ +L+ GL      R+A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 349 SSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCS 408
           S G   +    N  + +L       K  L++A  + ++M+         TY  LI   C 
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 487

Query: 409 GNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTS 468
            N   EA      M   G S  ++T + ++  LC +     +A     ++  G      +
Sbjct: 488 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 547

Query: 469 FDLIINELNKQGMRLSASNVYGLALKRGVNP 499
           ++ ++    + G    A+++       G  P
Sbjct: 548 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

[Close]

BLAST of HG10020467 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 5.7e-44
Identity = 106/368 (28.80%), Postives = 174/368 (47.28%), Query Frame = 0


Query: 112 EFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQM 171
           E N+     V   EL    K L N+  +G VP+    + +IR +C+ G+   A ++LE +
Sbjct: 104 ESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163

Query: 172 LGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRV 231
            G G  P+  T   +++ +CK G+   AL    V+ R+   P V TYN +L+ LC  G++
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLCDSGKL 223

Query: 232 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTL 291
           ++A E++  M +    PD+ TYT L++  C+      AM+LL+E  + G  P VVT+N L
Sbjct: 224 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 283

Query: 292 FNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGH 351
            NG CKEGR  + I  LN M    C P+ IT+  +L  +   G+   A +   +M+  G 
Sbjct: 284 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 343

Query: 352 TIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMI 411
           +      N  +  L +     K LL  A  + EKM       +  +Y  L+   C    +
Sbjct: 344 SPSVVTFNILINFLCR-----KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 403

Query: 412 SEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLI 471
             A+  L  M+ +G  P  +T + ++ +LC       +      L   G      +++ +
Sbjct: 404 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 463

Query: 472 INELNKQG 480
           I+ L K G
Sbjct: 464 IDGLAKAG 463

The following BLAST results are available for this feature:

BLAST of HG10020467 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904608.1	1.6e-229	84.29	pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida]	[more]
XP_022982589.1	2.8e-218	79.44	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucur...	[more]
KAG6580429.1	1.4e-217	78.83	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022935128.1	1.8e-217	78.63	pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata]	[more]
KAG7017186.1	5.3e-217	78.83	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of HG10020467 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR00	1.2e-46	30.11	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]
Q9FMF6	6.0e-46	26.87	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
Q9FIX3	1.1e-44	30.79	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	2.5e-44	27.62	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q3EDF8	8.1e-43	28.80	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]

BLAST of HG10020467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J506	1.4e-218	79.44	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc...	[more]
A0A6J1F9P1	8.8e-218	78.63	pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata...	[more]
A0A6J1DW66	9.5e-196	73.48	pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti...	[more]
A0A2I4EIR4	4.6e-134	56.92	pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Jug...	[more]
A0A5N6RKM0	9.7e-132	54.18	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_017034 PE=4 SV=1	[more]

BLAST of HG10020467 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04760.1	8.6e-48	30.11	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G64320.1	4.2e-47	26.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	8.0e-46	30.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53700.1	1.8e-45	27.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	5.7e-44	28.80	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 279..371 e-value: 9.5E-24 score: 85.7 coord: 372..454 e-value: 3.0E-11 score: 45.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 90..206 e-value: 2.0E-19 score: 72.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 207..278 e-value: 7.7E-23 score: 83.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 213..262 e-value: 4.4E-17 score: 62.0 coord: 283..332 e-value: 4.1E-15 score: 55.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 186..204 e-value: 0.29 score: 11.5 coord: 396..425 e-value: 0.19 score: 12.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 147..179 e-value: 1.6E-8 score: 32.2 coord: 251..285 e-value: 1.2E-9 score: 35.8 coord: 321..351 e-value: 1.4E-6 score: 26.1 coord: 217..250 e-value: 1.0E-8 score: 32.8 coord: 286..319 e-value: 2.4E-9 score: 34.8
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 140..171 e-value: 2.7E-10 score: 39.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 249..283 score: 13.811296
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..178 score: 12.408249
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 214..248 score: 11.925952
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 394..428 score: 10.226951
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 319..353 score: 10.588674
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 284..318 score: 11.969797
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 179..213 score: 8.812943
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 64..502
None	No IPR available	PANTHER	PTHR47942:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 64..502

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10020467.1	HG10020467.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding