HG10019846 (gene) Bottle gourd (Hangzhou Gourd) v1

InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Position :
0
Zoom :
x 1
ATGATGGTTGGTATACCATTGAGAGAGATGGTCCGAGTGATGAAATTAGAATCAGTGATGAACGTAGACATTGAAATTGGGATGAACCAAGGGTATAGAGTAAGAACTTCATATGTATTTTGCAAACTAGAGGTACCATATTCTTCAGAAGGAAATATAGCTGGTTTTGGAACCGCCGCTGCTTTATCTGATAGATACATTTCTTTTGAGAGAAATAACCTTGCAACATGGTCGTCCACTGGGATTTATATTAGTAGTCATGGTCTATCTTCACAAGCTGGTGCTGAGAACAGTGGAGATGAAGATAACGTGGAAGATGGATTTTCTGAACTTGACGAAACACTTCCAAGCACTAGTCCACTCGAAGATAGTAAGGCAGCTGATGATAATGAAGAGGAACTACCTTCTGGATCAGAAATTGATGATGATGATGATGGGACTCAAAATGAACTGGATTTACCTGAGGTAGAAACTGAACTTGCTGAAAAGATATCAACAAAATGGGCTCCTTCAGAGCTGTTCAAGGCTATTTGGAGTGCTCCAGGTTTATCTGTTCCTAGTGTACTTGATAAGTGGGTCAGTGAAGGAAAAGAAATAAACCGGGCTGAAATCTCTCTTGCCATGCTCAATCTTCGTAGACGTCGAATGTTTGGGAAGGCTTTGCAGTTTTCAGAGTGGTTGGAAGCAAGCGGGCAACTCGAATTTATTGAGAGAGATTATGCTTCTCGCCTTGACTTGATTGCAAAGGTACGGGGTCTCCATAACGCAGAGAGTTACATTGCTAAAATCCCAAAGTCGTTCCAAGGGGAGGTGGTATACCGAACTCTTTTGGCTAACTGTGTGATCGCCAACAATGTAAAAAAAGCAGAGGAAATATTTAACAAAATGAAGGACCTTGGATTCCCAATCACAGCATTTGCTTGCAACCAGTTGCTTCTTCTTCACAAGAGGCTTGACAAGAGGAAAATAGTCGACGTTTTGTTGTTGATGGAGAAAGAAAATGTCAAGCCGTCTCTGTTTACTTACAAAATCTTAATAGATGTTAAAGGCTTATCAAATGACATGATAGGGATGGAACAAGTTGTTGATACAATGAAGGCTGAAGGAATTAAACTTGATGTTACTGTACTTTCCATATTAGCTAAGCACTATGCTTCAGGTGGGCTTAAAGACAAAGCCATGGCCATTTTAAAGGAGATGGAAGATGTTAACTCCAAAGGTTCTCAATGGCCTTGCAGAATTTTACTTCCGCTCTATGGAGAACTCCAAATGGAAGATGAAGTGAGGAGGCTCTGGAAGATCTGCGAGTCAAATCCTCGTATCGAAGAATGCATGGCTGCCATTGTTGCTTGGGGAAAGTTGAAGAACATCCCGGAAGCAGAGAAAATTTTTAATAGAGTTGTAAAAACATGGAAAAAGCTGACCCCAAAACAATATACTACCATGTTGAAGGTTTATGCAGACAATAAGATGCTGACGAAGGGCAAGGAACTAGTCAAGCAGATGGCAGACAACGGTTGCCACATTGGTCCGTTGACATGGGATGCAGTTGTGAAGCTCTATGTGGAAGCTGGGGAGGTAGAAAAAGCAGACTCTTTCTTGCGTAAGGCTATTCAACAAAACCAGAAGAAGCCATTGTTTACCTCATACATGGTTATCATGGATCAGTATGCAAGGAAGGGGGATGTCCACAATACAGAGAAAATCTTTCATAAGATGAGACTCGATGGTTACGTGGCTCGATTCAGCCAATTTCAAACTCTAATACAGGCATACCTTAACGCCAAGGCTCCGGCCTATGGTATGAAAGAGAGAATGAAGGCAGATGATGTATTTCCAAACAAAGCTTTGGCAGGAAAATTAGCCCAAGTTGATGCTTTCAGGAAGACAGCAGTGTCAGATTTGCTTGACTGA20040060080010001200140016001800Expect = 3.6E-5 / Score = 21.7Expect = 2.9E-4 / Score = 18.8Expect = 0.0021 / Score = 18.1Expect = 0.0012 / Score = 19.0Expect = 0.0061 / Score = 16.7Expect = 1.4 / Score = 9.4Expect = 0.024 / Score = 14.9Score = 9.021208Score = 8.714292Expect = 8.3E-22 / Score = 79.9Expect = 6.1E-8 / Score = 34.2Expect = 5.9E-13 / Score = 50.5Score = Score = Score = Score = Score = SequenceTIGR00756PF13812PF01535PS51375PS51375G3DSA:1.25.40.10G3DSA:1.25.40.10mobidb-litemobidb-litePTHR45717PTHR45717:SF15SSF81901
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 479..508
e-value: 2.9E-4
score: 18.8
coord: 271..304
e-value: 3.6E-5
score: 21.7
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 307..349
e-value: 0.0021
score: 18.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 513..536
e-value: 1.4
score: 9.4
coord: 271..301
e-value: 0.0012
score: 19.0
coord: 479..507
e-value: 0.0061
score: 16.7
coord: 549..577
e-value: 0.024
score: 14.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 269..303
score: 9.021208
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 475..509
score: 8.714292
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 441..633
e-value: 8.3E-22
score: 79.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 183..317
e-value: 6.1E-8
score: 34.2
coord: 318..433
e-value: 5.9E-13
score: 50.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..150
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 42..637
NoneNo IPR availablePANTHERPTHR45717:SF15OS01G0280400 PROTEINcoord: 42..637
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 380..572