Homology
BLAST of HG10019470 vs. NCBI nr
Match:
XP_038906275.1 (ubiquitin receptor RAD23b-like [Benincasa hispida])
HSP 1 Score: 687.2 bits (1772), Expect = 7.9e-194
Identity = 359/387 (92.76%), Postives = 364/387 (94.06%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSK SGSAGQSST+PAQNPPVAQPILNST+ATQVTP PTPAPQAP
Sbjct: 61 ENKVSEEGFLVVMLSKSKASGSAGQSSTQPAQNPPVAQPILNSTSATQVTPSPTPAPQAP 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQAPSSAPKNTTSTSDR TDNVQTDTYGQAASNLVAGNNLEQT+QQLMDMGGGNWDRETV
Sbjct: 121 TQAPSSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETD SLPAPVSGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDTSLPAPVSGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALSAG G GSGNLGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGSGSGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHH EFLQLINEP++NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHTEFLQLINEPIDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387
BLAST of HG10019470 vs. NCBI nr
Match:
XP_008462953.1 (PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo])
HSP 1 Score: 676.8 bits (1745), Expect = 1.1e-190
Identity = 357/387 (92.25%), Postives = 362/387 (93.54%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSKTS SAGQSST+PAQNPPVAQP+L+ST A QVTP PTPAPQAP
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSASAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQAPSSA KNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGG WDRETV
Sbjct: 121 TQAPSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS+PAPVSGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALSAG GGG GNLGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHHAEFLQLINEPV+NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387
BLAST of HG10019470 vs. NCBI nr
Match:
XP_011651807.2 (ubiquitin receptor RAD23b [Cucumis sativus] >KAE8650953.1 hypothetical protein Csa_002067 [Cucumis sativus])
HSP 1 Score: 669.1 bits (1725), Expect = 2.2e-188
Identity = 358/401 (89.28%), Postives = 364/401 (90.77%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPA---- 120
ENKVSEEGFLVVMLSKSKTS SAGQSST+PAQNPPVAQP+L+ST A QVTP PTPA
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAAQVT 120
Query: 121 ----------PQAPTQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
QAPTQAPSSAPKNTTSTS+RVTDNVQTDTYGQAASNLVAGNNLEQTVQQ
Sbjct: 121 PSPTPAPQAPTQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQ 180
Query: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS
Sbjct: 181 LMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS 240
Query: 241 LPAPVSGAPNTAPLNMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------Q 300
+PAPVSGAPNTAPLNMFPQEALSAGSGGG GNLGSLEFLRNNP Q
Sbjct: 241 VPAPVSGAPNTAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQ 300
Query: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAA 360
PMLQELGKQNPQLLRLIQDHHAEFLQLINEPV+NFEGEMFEQAEPDMPHAINVTPAEQAA
Sbjct: 301 PMLQELGKQNPQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAA 360
Query: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 372
IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 401
BLAST of HG10019470 vs. NCBI nr
Match:
XP_022153480.1 (ubiquitin receptor RAD23b-like [Momordica charantia])
HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186
Identity = 346/387 (89.41%), Postives = 357/387 (92.25%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSKTSGS GQSST+PAQ+PPVAQP+LNST TQVTP PTPA QAP
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSGSVGQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAP 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQAPSSAP+NTTSTSDRV DNVQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGGNWDRETV
Sbjct: 121 TQAPSSAPRNTTSTSDRVADNVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPE+AEVAVPV RFGSGQATETDASL AP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASLAAPASGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALS G GGG GNLGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHHAEFLQLINEP++NFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA V
Sbjct: 301 RLIQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387
BLAST of HG10019470 vs. NCBI nr
Match:
XP_022934936.1 (ubiquitin receptor RAD23b-like [Cucurbita moschata])
HSP 1 Score: 655.6 bits (1690), Expect = 2.6e-184
Identity = 348/387 (89.92%), Postives = 356/387 (91.99%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSKTSGSAGQSST+PAQ+ PVAQPILNS ATQVTP PTPAPQA
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSAPATQVTPSPTPAPQAS 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQA SAPKNTTSTSDRVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGGNWDRETV
Sbjct: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+ASLPAP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALSAG GG LGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHHAEFLQLINEPV+NFEGEMFEQAEPDMPHAINVTP EQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 383
BLAST of HG10019470 vs. ExPASy Swiss-Prot
Match:
Q84L33 (Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3)
HSP 1 Score: 462.6 bits (1189), Expect = 4.2e-129
Identity = 260/389 (66.84%), Postives = 305/389 (78.41%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q V+QP+ +T++T+ PA +
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQAS---VQTSSVSQPVSATTSSTK------PAAPST 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQ S+P + + QTDTYGQAAS LV+G++LEQ VQQ+M+MGGG+WD+ETV
Sbjct: 121 TQ---SSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
RALRAAYNNPERAVDYLYSGIP++AEVAVPV Q + A+ AP SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
++FPQE ++A GSG+LG+LEFLRNN QPMLQELGKQNPQLL
Sbjct: 241 DLFPQETVAA---AGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVE--NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRA 360
RLIQ++ AEFLQL+NEP E + EG+MF+Q E +MPHAINVTPAEQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 360
Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 372
LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 371
BLAST of HG10019470 vs. ExPASy Swiss-Prot
Match:
Q84L32 (Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=2 SV=2)
HSP 1 Score: 432.6 bits (1111), Expect = 4.6e-120
Identity = 244/389 (62.72%), Postives = 296/389 (76.09%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRV PTDT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKV+EEGFLVVMLSKSKT+ SAG SST+P STT + ++ AP +
Sbjct: 61 ENKVTEEGFLVVMLSKSKTASSAGPSSTQP-----------TSTTTSTISSTTLAAP-ST 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQ+ + N+T ++ T Q+DTYGQAAS LV+G+++EQ VQQ+M+MGGG+WD+ETV
Sbjct: 121 TQSIAVPASNSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
RALRAAYNNPERAVDYLYSGIPE+ V +P SG + + + P P SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTAPPP-SGGPNSSPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
++FPQEA+S +G G+LG+LEFLR N QPMLQELGKQNPQLL
Sbjct: 241 DLFPQEAVSDAAG---GDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEG--EMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRA 360
RLIQ++ AEFLQL+NEP E +G ++F+Q + +MPH++NVTP EQ +IERLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRA 360
Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 372
+VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 IVIEAFLSCDRNEELAANYLLEHSADFED 368
BLAST of HG10019470 vs. ExPASy Swiss-Prot
Match:
Q84L30 (Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2)
HSP 1 Score: 355.9 bits (912), Expect = 5.5e-97
Identity = 214/393 (54.45%), Postives = 262/393 (66.67%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MK+ VKTL GS+FEI V+P D V VK IE V+G + YP +Q+LIH GKVLKDE+TL
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAE-YPAAKQMLIHQGKVLKDETTLE 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
EN V E F+V+MLSK+K S S +++ PA P QP T AT PT + P
Sbjct: 61 ENNVVENSFIVIMLSKTKASPSGASTASAPA--PSATQP---QTVATPQVSAPTASVPVP 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
T ++A T+ S VQTD YGQAASNLVAG LE TVQQ++DMGGG+WDR+TV
Sbjct: 121 TSGTATAAAPATAAS------VQTDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQ------ATETDASLPAPVSGA 240
VRALRAA+NNPERAV+YLYSGIP AE+ +G+ A A+ PA +G
Sbjct: 181 VRALRAAFNNPERAVEYLYSGIPAQAEIPPVAQAPATGEQAANPLAQPQQAAAPAAATGG 240
Query: 241 PNTAPLNMFPQEALSAGSGGGSGNLGSLEFLRN-------------NP---QPMLQELGK 300
PN PLN+FPQ +A +G G+GN L+FLRN NP QPMLQELGK
Sbjct: 241 PNANPLNLFPQGMPAADAGAGAGN---LDFLRNSQQFQALRAMVQANPQILQPMLQELGK 300
Query: 301 QNPQLLRLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMG 360
QNPQL+RLIQ+H A+FL+LINEPVE E M EQ E MP A+ VTP E+ AIERLE MG
Sbjct: 301 QNPQLVRLIQEHQADFLRLINEPVEGEENVM-EQLEAAMPQAVTVTPEEREAIERLEGMG 360
Query: 361 FDRALVIEAFLACDRNEELAANYLLENSGDFDD 372
FDRA+V+E F AC++NEELAANYLL++ +F+D
Sbjct: 361 FDRAMVLEVFFACNKNEELAANYLLDHMHEFED 377
BLAST of HG10019470 vs. ExPASy Swiss-Prot
Match:
Q84L31 (Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2)
HSP 1 Score: 346.3 bits (887), Expect = 4.3e-94
Identity = 220/426 (51.64%), Postives = 271/426 (63.62%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MK+ VKTLKG+HFEI V+P D+V+ VKKNIE VQG D YP +Q+LIH GKVLKDE+T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 61 ENKVSEEGFLVVMLSKSK------TSGSAGQS---STEPAQNPPVAQPILNSTTATQVTP 120
ENKV+E F+V+M++KSK +S SAG S S P+ + P P ++ + V P
Sbjct: 61 ENKVAENSFIVIMMNKSKPASAAASSASAGTSQAKSIPPSTSQPSISPQTPASVSAPVAP 120
Query: 121 LPT-PAPQAPTQAPSSAPKNTTSTS-----------------DRVTDNVQTDTYGQAASN 180
PT P P APT P+ T T+ D Q D YGQAASN
Sbjct: 121 APTRPPPPAPTPTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVYGQAASN 180
Query: 181 LVAGNNLEQTVQQLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVG 240
L AG+NLE T+QQ++DMGGG WDRETVV ALRAA+NNPERAV+YLY+GIPE AEV PV
Sbjct: 181 LAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP-PVA 240
Query: 241 R--FGSGQ----ATETDASLPAPVSGAPNTAPLNMFPQEALSAGSGGGSGNLGSLEFLRN 300
R +GQ +T AP SG PN PL++FPQ + G G+ G+L+FLRN
Sbjct: 241 RPPASAGQPANPPAQTQQPAAAPASG-PNANPLDLFPQGLPNVGGNPGA---GTLDFLRN 300
Query: 301 -------------NP---QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVE------NF 360
NP QPMLQELGKQNP L+RLIQDH A+FL+LINEPVE N
Sbjct: 301 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 360
Query: 361 EGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLEN 372
G+M A P AI VT E+ AIERLEAMGF+RALV+E F AC++NEELAANYLL++
Sbjct: 361 LGQM--AAGMPQPQAIQVTHEEREAIERLEAMGFERALVLEVFFACNKNEELAANYLLDH 419
BLAST of HG10019470 vs. ExPASy Swiss-Prot
Match:
Q40742 (Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RAD23 PE=1 SV=2)
HSP 1 Score: 311.2 bits (796), Expect = 1.5e-83
Identity = 190/394 (48.22%), Postives = 248/394 (62.94%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MK++VKTLKGS F+I V V VK+ IE QG+ YP QQ+LIH GKVLKD++TL
Sbjct: 1 MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60
Query: 61 ENKVSEEGFLVVMLSKSK-TSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLP-TPAPQ 120
ENKV E FLV+ML + K +S SA +S P+ P Q + A + P PA
Sbjct: 61 ENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTV----PAAPASQAPVAPATT 120
Query: 121 APTQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRE 180
P + P T S + V + + D YGQA SNLVAG+NLE T+Q +++MGGG WDR+
Sbjct: 121 VPVTVSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRD 180
Query: 181 TVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATE----TDASLPAPVSGA 240
V+ AL AA+NNPERAV+YLYSG+PE ++ VP T+ T + P+ +S
Sbjct: 181 IVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAPSILSSG 240
Query: 241 PNTAPLNMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGK 300
PN +PL++FPQ AL S +G LG+L+ LRNN QP+LQELGK
Sbjct: 241 PNASPLDLFPQ-ALPNASTDAAG-LGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGK 300
Query: 301 QNPQLLRLIQDHHAEFLQLINEPVENFEGE-MFEQAEPDMPHAINVTPAEQAAIERLEAM 360
QNPQ+L+LIQ++ AEFL LINEP E + E + +Q MP I VTP E AI RLEAM
Sbjct: 301 QNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAM 360
Query: 361 GFDRALVIEAFLACDRNEELAANYLLENSGDFDD 372
GFDRALV++ F AC+++E+LAANYLL++ +FDD
Sbjct: 361 GFDRALVLDVFFACNKDEQLAANYLLDHMNEFDD 388
BLAST of HG10019470 vs. ExPASy TrEMBL
Match:
A0A1S3CI18 (Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1)
HSP 1 Score: 676.8 bits (1745), Expect = 5.2e-191
Identity = 357/387 (92.25%), Postives = 362/387 (93.54%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSKTS SAGQSST+PAQNPPVAQP+L+ST A QVTP PTPAPQAP
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSASAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQAPSSA KNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGG WDRETV
Sbjct: 121 TQAPSSALKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGTWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS+PAPVSGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALSAG GGG GNLGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHHAEFLQLINEPV+NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387
BLAST of HG10019470 vs. ExPASy TrEMBL
Match:
A0A0A0LF05 (Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1)
HSP 1 Score: 676.0 bits (1743), Expect = 8.8e-191
Identity = 359/391 (91.82%), Postives = 365/391 (93.35%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQ TDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQLTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAP--- 120
ENKVSEEGFLVVMLSKSKTS SAGQSST+PAQNPPVAQP+L+ST A QVTP PTPAP
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSVSAGQSSTQPAQNPPVAQPVLSSTPAAQVTPSPTPAPQAP 120
Query: 121 -QAPTQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWD 180
QAPTQAPSSAPKNTTSTS+RVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWD
Sbjct: 121 TQAPTQAPSSAPKNTTSTSERVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWD 180
Query: 181 RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPN 240
RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDAS+PAPVSGAPN
Sbjct: 181 RETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASVPAPVSGAPN 240
Query: 241 TAPLNMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQN 300
TAPLNMFPQEALSAGSGGG GNLGSLEFLRNNP QPMLQELGKQN
Sbjct: 241 TAPLNMFPQEALSAGSGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQN 300
Query: 301 PQLLRLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFD 360
PQLLRLIQDHHAEFLQLINEPV+NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFD
Sbjct: 301 PQLLRLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFD 360
Query: 361 RALVIEAFLACDRNEELAANYLLENSGDFDD 372
RALVIEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 RALVIEAFLACDRNEELAANYLLENSGDFDD 391
BLAST of HG10019470 vs. ExPASy TrEMBL
Match:
A0A6J1DGY9 (Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=1)
HSP 1 Score: 663.3 bits (1710), Expect = 5.9e-187
Identity = 346/387 (89.41%), Postives = 357/387 (92.25%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSKTSGS GQSST+PAQ+PPVAQP+LNST TQVTP PTPA QAP
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSGSVGQSSTQPAQSPPVAQPVLNSTPTTQVTPSPTPALQAP 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQAPSSAP+NTTSTSDRV DNVQTDTYGQAASNLVAGNNLEQT+QQ+MDMGGGNWDRETV
Sbjct: 121 TQAPSSAPRNTTSTSDRVADNVQTDTYGQAASNLVAGNNLEQTIQQIMDMGGGNWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPE+AEVAVPV RFGSGQATETDASL AP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPETAEVAVPVARFGSGQATETDASLAAPASGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALS G GGG GNLGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHHAEFLQLINEP++NFEG+MFEQAE DMPHAINVTPAEQAAIERLEAMGFDRA V
Sbjct: 301 RLIQDHHAEFLQLINEPLDNFEGDMFEQAEQDMPHAINVTPAEQAAIERLEAMGFDRASV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 387
BLAST of HG10019470 vs. ExPASy TrEMBL
Match:
A0A6J1F373 (Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441959 PE=3 SV=1)
HSP 1 Score: 655.6 bits (1690), Expect = 1.2e-184
Identity = 348/387 (89.92%), Postives = 356/387 (91.99%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTLA
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLA 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSKTSGSAGQSST+PAQ+ PVAQPILNS ATQVTP PTPAPQA
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSAPATQVTPSPTPAPQAS 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQA SAPKNTTSTSDRVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGGNWDRETV
Sbjct: 121 TQAQLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+ASLPAP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALSAG GG LGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHHAEFLQLINEPV+NFEGEMFEQAEPDMPHAINVTP EQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 383
BLAST of HG10019470 vs. ExPASy TrEMBL
Match:
A0A6J1IZA3 (Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482038 PE=3 SV=1)
HSP 1 Score: 653.7 bits (1685), Expect = 4.7e-184
Identity = 347/387 (89.66%), Postives = 355/387 (91.73%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIED+QGKDNYPCGQQLLIHNGKVLKDESTL
Sbjct: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDESTLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKVSEEGFLVVMLSKSKTSGSAGQSST+PAQ+ PVAQPILNST AT VTP PTPAPQA
Sbjct: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTQPAQSTPVAQPILNSTPATHVTPSPTPAPQAS 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQA SAPKNTTSTSDRVTD++QTDTYGQAASNLVAGNNLEQT+QQLMDMGGGNWDRETV
Sbjct: 121 TQAHLSAPKNTTSTSDRVTDSMQTDTYGQAASNLVAGNNLEQTIQQLMDMGGGNWDRETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSG ATET+ASLPAP SGAPNTAPL
Sbjct: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGPATETEASLPAPASGAPNTAPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
NMFPQEALSAG GG LGSLEFLRNNP QPMLQELGKQNPQLL
Sbjct: 241 NMFPQEALSAGGGG----LGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALV 360
RLIQDHHAEFLQLINEPV+NFEGEMFEQAEPDMPHAINVTP EQAAIERLEAMGFDRALV
Sbjct: 301 RLIQDHHAEFLQLINEPVDNFEGEMFEQAEPDMPHAINVTPDEQAAIERLEAMGFDRALV 360
Query: 361 IEAFLACDRNEELAANYLLENSGDFDD 372
IEAFLACDRNEELAANYLLENSGDFDD
Sbjct: 361 IEAFLACDRNEELAANYLLENSGDFDD 383
BLAST of HG10019470 vs. TAIR 10
Match:
AT1G79650.1 (Rad23 UV excision repair protein family )
HSP 1 Score: 462.6 bits (1189), Expect = 3.0e-130
Identity = 260/389 (66.84%), Postives = 305/389 (78.41%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q V+QP+ +T++T+ PA +
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQAS---VQTSSVSQPVSATTSSTK------PAAPST 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQ S+P + + QTDTYGQAAS LV+G++LEQ VQQ+M+MGGG+WD+ETV
Sbjct: 121 TQ---SSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
RALRAAYNNPERAVDYLYSGIP++AEVAVPV Q + A+ AP SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
++FPQE ++A GSG+LG+LEFLRNN QPMLQELGKQNPQLL
Sbjct: 241 DLFPQETVAA---AGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVE--NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRA 360
RLIQ++ AEFLQL+NEP E + EG+MF+Q E +MPHAINVTPAEQ AI+RLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRA 360
Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 372
LVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 LVIEAFLACDRNEELAANYLLENSGDFED 371
BLAST of HG10019470 vs. TAIR 10
Match:
AT1G79650.2 (Rad23 UV excision repair protein family )
HSP 1 Score: 460.7 bits (1184), Expect = 1.1e-129
Identity = 259/390 (66.41%), Postives = 299/390 (76.67%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEP-AQNPPVAQPILNSTTATQVTPLPTPAPQA 120
ENKV+EEGFLVVMLSKSK+ GSAGQ+S +P + +P STT + P PA
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQASVQPVSATTSSTKPAAPSTTQSS----PVPASPI 120
Query: 121 PTQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRET 180
P Q +A QTDTYGQAAS LV+G++LEQ VQQ+M+MGGG+WD+ET
Sbjct: 121 PAQEQPAA---------------QTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKET 180
Query: 181 VVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAP 240
V RALRAAYNNPERAVDYLYSGIP++AEVAVPV Q + A+ AP SG PN++P
Sbjct: 181 VTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSP 240
Query: 241 LNMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQL 300
L++FPQE ++A GSG+LG+LEFLRNN QPMLQELGKQNPQL
Sbjct: 241 LDLFPQETVAA---AGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQL 300
Query: 301 LRLIQDHHAEFLQLINEPVE--NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDR 360
LRLIQ++ AEFLQL+NEP E + EG+MF+Q E +MPHAINVTPAEQ AI+RLEAMGFDR
Sbjct: 301 LRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDR 360
Query: 361 ALVIEAFLACDRNEELAANYLLENSGDFDD 372
ALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 ALVIEAFLACDRNEELAANYLLENSGDFED 365
BLAST of HG10019470 vs. TAIR 10
Match:
AT1G79650.3 (Rad23 UV excision repair protein family )
HSP 1 Score: 459.1 bits (1180), Expect = 3.3e-129
Identity = 256/373 (68.63%), Postives = 301/373 (80.70%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q V+QP+ +T++T+ PA +
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQAS---VQTSSVSQPVSATTSSTK------PAAPST 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQ S+P + + QTDTYGQAAS LV+G++LEQ VQQ+M+MGGG+WD+ETV
Sbjct: 121 TQ---SSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
RALRAAYNNPERAVDYLYSGIP++AEVAVPV Q + A+ AP SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGAAPVAPASGGPNSSPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNPQPMLQELGKQNPQLLRLIQDHHAEFLQLINE 300
++FPQE ++A GSG+LG+LEFLRNN QELGKQNPQLLRLIQ++ AEFLQL+NE
Sbjct: 241 DLFPQETVAA---AGSGDLGTLEFLRNND----QELGKQNPQLLRLIQENQAEFLQLVNE 300
Query: 301 PVE--NFEGEMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRALVIEAFLACDRNEELA 360
P E + EG+MF+Q E +MPHAINVTPAEQ AI+RLEAMGFDRALVIEAFLACDRNEELA
Sbjct: 301 PYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELA 351
Query: 361 ANYLLENSGDFDD 372
ANYLLENSGDF+D
Sbjct: 361 ANYLLENSGDFED 351
BLAST of HG10019470 vs. TAIR 10
Match:
AT1G79650.4 (Rad23 UV excision repair protein family )
HSP 1 Score: 454.5 bits (1168), Expect = 8.0e-128
Identity = 260/404 (64.36%), Postives = 303/404 (75.00%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRV P+DT+MAVKKNIED QGKDNYPCGQQLLIHNGKVLKDE++L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQ------VTPLPT 120
ENKV+EEGFLVVMLSKSK+ GSAGQ+S Q V+QP+ +T++T+ P
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGGSAGQAS---VQTSSVSQPVSATTSSTKPAAPSTTQSSPV 120
Query: 121 PAPQAPTQAPSSAPKNTTSTSDRV---------TDNVQTDTYGQAASNLVAGNNLEQTVQ 180
PA P Q + S + QTDTYGQAAS LV+G++LEQ VQ
Sbjct: 121 PASPIPAQEQPAVYAFVFSFAGLAFCPLYGFPKVSMAQTDTYGQAASTLVSGSSLEQMVQ 180
Query: 181 QLMDMGGGNWDRETVVRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDA 240
Q+M+MGGG+WD+ETV RALRAAYNNPERAVDYLYSGIP++AEVAVPV Q + A
Sbjct: 181 QIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPV---PEAQIAGSGA 240
Query: 241 SLPAPVSGAPNTAPLNMFPQEALSAGSGGGSGNLGSLEFLRNNP---------------- 300
+ AP SG PN++PL++FPQE ++A GSG+LG+LEFLRNN
Sbjct: 241 APVAPASGGPNSSPLDLFPQETVAA---AGSGDLGTLEFLRNNDQFQQLRTMVHSNPQIL 300
Query: 301 QPMLQELGKQNPQLLRLIQDHHAEFLQLINEPVE--NFEGEMFEQAEPDMPHAINVTPAE 360
QPMLQELGKQNPQLLRLIQ++ AEFLQL+NEP E + EG+MF+Q E +MPHAINVTPAE
Sbjct: 301 QPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAE 360
Query: 361 QAAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFDD 372
Q AI+RLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDF+D
Sbjct: 361 QEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED 395
BLAST of HG10019470 vs. TAIR 10
Match:
AT1G16190.1 (Rad23 UV excision repair protein family )
HSP 1 Score: 432.6 bits (1111), Expect = 3.3e-121
Identity = 244/389 (62.72%), Postives = 296/389 (76.09%), Query Frame = 0
Query: 1 MKLTVKTLKGSHFEIRVQPTDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDESTLA 60
MKLTVKTLKGSHFEIRV PTDT+MAVKKNIED Q KDNYPCGQQLLIHNGKVLKDE+TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 61 ENKVSEEGFLVVMLSKSKTSGSAGQSSTEPAQNPPVAQPILNSTTATQVTPLPTPAPQAP 120
ENKV+EEGFLVVMLSKSKT+ SAG SST+P STT + ++ AP +
Sbjct: 61 ENKVTEEGFLVVMLSKSKTASSAGPSSTQP-----------TSTTTSTISSTTLAAP-ST 120
Query: 121 TQAPSSAPKNTTSTSDRVTDNVQTDTYGQAASNLVAGNNLEQTVQQLMDMGGGNWDRETV 180
TQ+ + N+T ++ T Q+DTYGQAAS LV+G+++EQ VQQ+M+MGGG+WD+ETV
Sbjct: 121 TQSIAVPASNSTPVQEQPT--AQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETV 180
Query: 181 VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATETDASLPAPVSGAPNTAPL 240
RALRAAYNNPERAVDYLYSGIPE+ V +P SG + + + P P SG PN++PL
Sbjct: 181 TRALRAAYNNPERAVDYLYSGIPET--VTIPATNL-SGVGSGRELTAPPP-SGGPNSSPL 240
Query: 241 NMFPQEALSAGSGGGSGNLGSLEFLRNNP----------------QPMLQELGKQNPQLL 300
++FPQEA+S +G G+LG+LEFLR N QPMLQELGKQNPQLL
Sbjct: 241 DLFPQEAVSDAAG---GDLGTLEFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLL 300
Query: 301 RLIQDHHAEFLQLINEPVENFEG--EMFEQAEPDMPHAINVTPAEQAAIERLEAMGFDRA 360
RLIQ++ AEFLQL+NEP E +G ++F+Q + +MPH++NVTP EQ +IERLEAMGFDRA
Sbjct: 301 RLIQENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEEQESIERLEAMGFDRA 360
Query: 361 LVIEAFLACDRNEELAANYLLENSGDFDD 372
+VIEAFL+CDRNEELAANYLLE+S DF+D
Sbjct: 361 IVIEAFLSCDRNEELAANYLLEHSADFED 368
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038906275.1 | 7.9e-194 | 92.76 | ubiquitin receptor RAD23b-like [Benincasa hispida] | [more] |
XP_008462953.1 | 1.1e-190 | 92.25 | PREDICTED: ubiquitin receptor RAD23b isoform X1 [Cucumis melo] | [more] |
XP_011651807.2 | 2.2e-188 | 89.28 | ubiquitin receptor RAD23b [Cucumis sativus] >KAE8650953.1 hypothetical protein C... | [more] |
XP_022153480.1 | 1.2e-186 | 89.41 | ubiquitin receptor RAD23b-like [Momordica charantia] | [more] |
XP_022934936.1 | 2.6e-184 | 89.92 | ubiquitin receptor RAD23b-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
Q84L33 | 4.2e-129 | 66.84 | Ubiquitin receptor RAD23b OS=Arabidopsis thaliana OX=3702 GN=RAD23B PE=1 SV=3 | [more] |
Q84L32 | 4.6e-120 | 62.72 | Probable ubiquitin receptor RAD23a OS=Arabidopsis thaliana OX=3702 GN=RAD23A PE=... | [more] |
Q84L30 | 5.5e-97 | 54.45 | Ubiquitin receptor RAD23d OS=Arabidopsis thaliana OX=3702 GN=RAD23D PE=1 SV=2 | [more] |
Q84L31 | 4.3e-94 | 51.64 | Ubiquitin receptor RAD23c OS=Arabidopsis thaliana OX=3702 GN=RAD23C PE=1 SV=2 | [more] |
Q40742 | 1.5e-83 | 48.22 | Probable ubiquitin receptor RAD23 OS=Oryza sativa subsp. japonica OX=39947 GN=RA... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CI18 | 5.2e-191 | 92.25 | Ubiquitin receptor RAD23 OS=Cucumis melo OX=3656 GN=LOC103501214 PE=3 SV=1 | [more] |
A0A0A0LF05 | 8.8e-191 | 91.82 | Ubiquitin receptor RAD23 OS=Cucumis sativus OX=3659 GN=Csa_3G710740 PE=3 SV=1 | [more] |
A0A6J1DGY9 | 5.9e-187 | 89.41 | Ubiquitin receptor RAD23 OS=Momordica charantia OX=3673 GN=LOC111020977 PE=3 SV=... | [more] |
A0A6J1F373 | 1.2e-184 | 89.92 | Ubiquitin receptor RAD23 OS=Cucurbita moschata OX=3662 GN=LOC111441959 PE=3 SV=1 | [more] |
A0A6J1IZA3 | 4.7e-184 | 89.66 | Ubiquitin receptor RAD23 OS=Cucurbita maxima OX=3661 GN=LOC111482038 PE=3 SV=1 | [more] |