HG10019462 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10019462
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Germin-like protein
Location	Chr04: 22080104 .. 22080935 (-)
RNA-Seq Expression	HG10019462
Synteny	HG10019462

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAACCATCATCAGCTTCTTCCTTAATTTTTCTTCTGCTGTTTGTGTTGTTTTCTTGTCTTGGAATCTCAGTAGCAGATTCTAATAATGTCTTTGACACTTGTCCAACAGCCCCAAACAGAACTCAGTTCATCAATGGCTACCATTGCAAAAGCCCCACCCTTGTTACAACTTCTGACTTCAACTCAGCTAAGTTAACGGGACCGATCAATACCGATAATCGATCAAACTTGTTGATGAAGATTGTCACTGCTGCAGATTTCCCTGGTCTGAATACATTGGGGCTTTCTATTTCTAGAACTGATTTGGGTATGGACGCTATGGTTTCTCTTCACTCGCACCCGAGAGCCACCGAGATGTTCTTTCTGAACCAAGGTACGTATTTCTCAAAGTACCGAAATAAGATTCAATTCATTGAAACTCATTAACTTAAACTTTTGGGTTAAGTGATGATCTAACATGCTTTCAAAGTTGGAAGTCCTGTGTTCTCATCTCTTTCGAGAAATATGATTCGCAGGTATTGTTCTAGCTGGATTCATTGATACCAAGAATCAACTGTTTCAGACTGTTCTAAAGGCAGGCGATGTGATTGTATTTCCAAAAGGGTTGTTGCACTTCTGTTTGAATTCTGGTTACGAGCCTGCCATAAGTTTCTCAGTGTACAATAGTCAGAATCCAGGAGTTGTGATCCTCAACGGCGCCATGTTTGATCCTGCTGATCCGAGTCATTTCATAGACAAGTTCCTTAAGAGACTAAAAGCTCTTTCTTCGCAGTCAAATTTCAAATTCAACCCAAATGTAACTCTTCCTAGATACACAAGTTTGTAA

mRNA sequence

ATGAAGAAACCATCATCAGCTTCTTCCTTAATTTTTCTTCTGCTGTTTGTGTTGTTTTCTTGTCTTGGAATCTCAGTAGCAGATTCTAATAATGTCTTTGACACTTGTCCAACAGCCCCAAACAGAACTCAGTTCATCAATGGCTACCATTGCAAAAGCCCCACCCTTGTTACAACTTCTGACTTCAACTCAGCTAAGTTAACGGGACCGATCAATACCGATAATCGATCAAACTTGTTGATGAAGATTGTCACTGCTGCAGATTTCCCTGGTCTGAATACATTGGGGCTTTCTATTTCTAGAACTGATTTGGGTATGGACGCTATGGTTTCTCTTCACTCGCACCCGAGAGCCACCGAGATGTTCTTTCTGAACCAAGGTATTGTTCTAGCTGGATTCATTGATACCAAGAATCAACTGTTTCAGACTGTTCTAAAGGCAGGCGATGTGATTGTATTTCCAAAAGGGTTGTTGCACTTCTGTTTGAATTCTGGTTACGAGCCTGCCATAAGTTTCTCAGTGTACAATAGTCAGAATCCAGGAGTTGTGATCCTCAACGGCGCCATGTTTGATCCTGCTGATCCGAGTCATTTCATAGACAAGTTCCTTAAGAGACTAAAAGCTCTTTCTTCGCAGTCAAATTTCAAATTCAACCCAAATGTAACTCTTCCTAGATACACAAGTTTGTAA

Coding sequence (CDS)

ATGAAGAAACCATCATCAGCTTCTTCCTTAATTTTTCTTCTGCTGTTTGTGTTGTTTTCTTGTCTTGGAATCTCAGTAGCAGATTCTAATAATGTCTTTGACACTTGTCCAACAGCCCCAAACAGAACTCAGTTCATCAATGGCTACCATTGCAAAAGCCCCACCCTTGTTACAACTTCTGACTTCAACTCAGCTAAGTTAACGGGACCGATCAATACCGATAATCGATCAAACTTGTTGATGAAGATTGTCACTGCTGCAGATTTCCCTGGTCTGAATACATTGGGGCTTTCTATTTCTAGAACTGATTTGGGTATGGACGCTATGGTTTCTCTTCACTCGCACCCGAGAGCCACCGAGATGTTCTTTCTGAACCAAGGTATTGTTCTAGCTGGATTCATTGATACCAAGAATCAACTGTTTCAGACTGTTCTAAAGGCAGGCGATGTGATTGTATTTCCAAAAGGGTTGTTGCACTTCTGTTTGAATTCTGGTTACGAGCCTGCCATAAGTTTCTCAGTGTACAATAGTCAGAATCCAGGAGTTGTGATCCTCAACGGCGCCATGTTTGATCCTGCTGATCCGAGTCATTTCATAGACAAGTTCCTTAAGAGACTAAAAGCTCTTTCTTCGCAGTCAAATTTCAAATTCAACCCAAATGTAACTCTTCCTAGATACACAAGTTTGTAA

Protein sequence

MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTSDFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL

Homology

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BLAST of HG10019462 vs. NCBI nr
Match: XP_038905670.1 (germin-like protein subfamily 3 member 4 [Benincasa hispida])

HSP 1 Score: 424.5 bits (1090), Expect = 5.9e-115
Identity = 209/229 (91.27%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           MK PSSASSLIFLLLFVLF+CLGISVADSNNVFDTCPTA +R +FINGYHCKSPTLVTTS
Sbjct: 15  MKNPSSASSLIFLLLFVLFACLGISVADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTS 74

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DFNSAKLTGPIN+D++ NLL+KIVTAADFPGLNTLGLSISRTDLG DA++S HSHPRATE
Sbjct: 75  DFNSAKLTGPINSDDQFNLLVKIVTAADFPGLNTLGLSISRTDLGTDAIISPHSHPRATE 134

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFFLNQGIVLAGFIDT+NQLFQT+LKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP
Sbjct: 135 MFFLNQGIVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 194

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGAMFDPAD SHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL
Sbjct: 195 GVVNINGAMFDPADSSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 243

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BLAST of HG10019462 vs. NCBI nr
Match: XP_008465454.1 (PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis melo] >KAA0034959.1 germin-like protein subfamily 3 member 4 [Cucumis melo var. makuwa] >TYK21314.1 germin-like protein subfamily 3 member 4 [Cucumis melo var. makuwa])

HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-107
Identity = 199/229 (86.90%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           MK PS ASSLIFLLLFVLFSCLGIS+ADSNNVFDTCPTA +R +FINGYHCKSPTLVTTS
Sbjct: 1   MKNPSLASSLIFLLLFVLFSCLGISLADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTS 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DFNSAKLT P+NTD+R NL++KIVTAADF GLNTLGLSISRTDL +DA+VS HSHPRATE
Sbjct: 61  DFNSAKLTEPVNTDDRINLVVKIVTAADFHGLNTLGLSISRTDLVIDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFFLNQGIVLAGFIDT+NQLFQT+LKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP
Sbjct: 121 MFFLNQGIVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGA+FDPAD SHFI+KFLKRL   SSQSNFK NPNVTL RYTSL
Sbjct: 181 GVVNINGAVFDPADSSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

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BLAST of HG10019462 vs. NCBI nr
Match: XP_022153439.1 (germin-like protein subfamily 3 member 4 [Momordica charantia])

HSP 1 Score: 362.1 bits (928), Expect = 3.6e-96
Identity = 179/229 (78.17%), Postives = 207/229 (90.39%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           MKKPSS SSLIFLLLFVLFSCLGISVADSNNVFDTCPTA N+++FING+ CK+PT+VTTS
Sbjct: 1   MKKPSS-SSLIFLLLFVLFSCLGISVADSNNVFDTCPTATNKSEFINGFPCKNPTIVTTS 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DFNSAKLTGP++TD++    + I+TAA+F GLNTLGLSISRTDLG DA+VS HSHPRATE
Sbjct: 61  DFNSAKLTGPVDTDDQFISSVNILTAAEFSGLNTLGLSISRTDLGTDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           +FF+NQGIVLAGF+DTKN+LFQ+ LKAGDV+VFPKGLLHFCLNSGYEPAI FSV+NSQNP
Sbjct: 121 IFFVNQGIVLAGFLDTKNRLFQSFLKAGDVMVFPKGLLHFCLNSGYEPAIIFSVFNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGAMF+PAD +H + KFL+RLK+LSS S+ KFNPNVTL  Y SL
Sbjct: 181 GVVNINGAMFEPADSNHLVHKFLERLKSLSSLSSLKFNPNVTLTTYISL 228

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BLAST of HG10019462 vs. NCBI nr
Match: XP_023522282.1 (germin-like protein subfamily 3 member 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.0 bits (920), Expect = 3.0e-95
Identity = 181/229 (79.04%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           M KPS  SSLIFLL+ VLFSCLGISVADS+NVFD+CPTA +R  FING+ CK+PT+V T 
Sbjct: 15  MNKPS--SSLIFLLV-VLFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTD 74

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DF SAKLTGP+NTD+R + L+K+VTAADFPGLN+LGLSISRTDLG DA++S HSHPRATE
Sbjct: 75  DFTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIISPHSHPRATE 134

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFF+NQGIVLAGFIDTKN+LFQ  LK GDVIVFPKGLLHFCLNSGYE A  FSVYNSQNP
Sbjct: 135 MFFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNP 194

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGAMF+PAD SHFIDKFL +LKALSS  N KFNPNVTLPRY SL
Sbjct: 195 GVVNVNGAMFEPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 240

[Close]

BLAST of HG10019462 vs. NCBI nr
Match: XP_022948659.1 (germin-like protein subfamily 3 member 4 [Cucurbita moschata] >XP_022948660.1 germin-like protein subfamily 3 member 4 [Cucurbita moschata])

HSP 1 Score: 356.7 bits (914), Expect = 1.5e-94
Identity = 181/229 (79.04%), Postives = 199/229 (86.90%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           M KPS  SSLIFLL+ V FSCLGISVADS+NVFD+CPTA +R  FING+ CK+PT+V T 
Sbjct: 1   MNKPS--SSLIFLLV-VFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTD 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DF SAKLTGP+NTD+R + L+K+VTAADFPGLN+LGLSISRTDLG DA+VS HSHPRATE
Sbjct: 61  DFTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFF+NQGIVLAGFIDTKN+LFQ  LK GDVIVFPKGLLHFCLNSGYE A  FSVYNSQNP
Sbjct: 121 MFFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGAMF PAD SHFIDKFL +LKALSS  N KFNPNVTLPRY SL
Sbjct: 181 GVVNVNGAMFKPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 226

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BLAST of HG10019462 vs. ExPASy Swiss-Prot
Match: Q9FLT3 (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana OX=3702 GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 6.7e-53
Identity = 101/170 (59.41%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 17  VLFSCLGISVA-DSNNVFDTCPTAPNRTQ--FINGYHCKSPTLVTTSDFNSAKLTGPINT 76
           ++F  + +SV+ DS+N+ DTCPTAP      FINGY CK+PT +T  DF S KLT   +T
Sbjct: 7   IVFCAIFLSVSGDSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDT 66

Query: 77  DNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIVLAGF 136
           DN     + ++TA +FPGLNTLGLS+SRTDL  D  V  HSHPR++EM F+ +G+V AGF
Sbjct: 67  DNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGF 126

Query: 137 IDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVV 184
           +DT N++FQTVL+ GDV VFPKGLLHFCL+ G+EPA +FS YNSQNPGVV
Sbjct: 127 VDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVV 176

[Close]

BLAST of HG10019462 vs. ExPASy Swiss-Prot
Match: Q2R352 (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0537350 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-42
Identity = 92/183 (50.27%), Postives = 120/183 (65.57%), Query Frame = 0


Query: 12  FLLLFVLFSCLGISVADSNNVFDTCPTAP--NRTQFINGYHCKSPTLVTTSDFNSAKLTG 71
           +LLL  LF+   IS  DS  + D CP AP   R  F+NG+ CKSP+ +  SDF +  L  
Sbjct: 10  YLLLLGLFAPEIIS--DSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNH 69

Query: 72  PINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIV 131
             + DN       I+TA +FPGLNTLG+S++RTD+ +   V  HSHPRA+EM F++ G V
Sbjct: 70  AGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSV 129

Query: 132 LAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVILNGAM 191
           +AGF DTK +LFQ  L  GDV +FP+GL+HF +N G+  A +FSV NSQNPGVV +  AM
Sbjct: 130 VAGFFDTKGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAM 189

Query: 192 FDP 193
           F P
Sbjct: 190 FAP 190

[Close]

BLAST of HG10019462 vs. ExPASy Swiss-Prot
Match: P45852 (Germin-like protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.2e-32
Identity = 72/158 (45.57%), Postives = 92/158 (58.23%), Query Frame = 0


Query: 40  PNRTQFINGYHCKSPTLVTTSDFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSI 99
           PN   F+NG  CK P  V   DF    L  P NTDN       +VTAA+ PGLNTLG+S+
Sbjct: 38  PNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISV 97

Query: 100 SRTDLGMDAMVSLHSHPRATEMFFLNQGIVLAGFI-----DTKNQLFQTVLKAGDVIVFP 159
           +R D     +   H+HPRATE+F + +G    GF+     D  N+LF  VL  GDV VFP
Sbjct: 98  ARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFP 157

Query: 160 KGLLHFCLNSGYEPAISFSVYNSQNPGVVILNGAMFDP 193
           +GL+HF LN G  P +  S  +SQNPGV+ +  A+F P
Sbjct: 158 QGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFGP 195

[Close]

BLAST of HG10019462 vs. ExPASy Swiss-Prot
Match: P94072 (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana OX=3702 GN=GER3 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.9e-30
Identity = 79/212 (37.26%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 13  LLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTSDFNSAKLTGPIN 72
           +++ + F    IS     +V D C   P   Q  +GY CK+P  VT +DF     TG   
Sbjct: 3   MIIQIFFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDF---AFTGLGT 62

Query: 73  TDNRSNLLMKIVTAADFP---GLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIV 132
             N SN++   VT A  P   G+N LG+S++R DL    ++ LH+HP A+E+  + QG +
Sbjct: 63  AGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTI 122

Query: 133 LAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVILNGAM 192
            AGFI + N+++   L  GD +VFP+GLLHF LNSG  PA++F  + S +PG+ IL  A+
Sbjct: 123 CAGFISSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFAL 182

Query: 193 FDPADPSHFI-------DKFLKRLKALSSQSN 215
           F    PS  +       D  +K+LK +   +N
Sbjct: 183 FANDLPSELVEATTFLSDAEVKKLKGVLGGTN 211

[Close]

BLAST of HG10019462 vs. ExPASy Swiss-Prot
Match: Q7XSN6 (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-29
Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 27  ADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTSDFNSAKLTG-PINTDNRSNLLMKIVT 86
           +D + + D C        F+NG+ CK+P  VT +DF   K  G P NT N     +  VT
Sbjct: 28  SDPSQLQDFCVADKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVT 87

Query: 87  AADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIVLAGFIDTK-----NQL 146
             + PGLNTLG+S +R D   +     H+HPRATE+  + QG +L GF+ +      N  
Sbjct: 88  VNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQ 147

Query: 147 FQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVILNGAMFDPADP 196
           F  +L  GDV VFP+GL+HF LN+G  PA++ +  +SQNPGV+ +  A+F    P
Sbjct: 148 FTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPP 202

[Close]

BLAST of HG10019462 vs. ExPASy TrEMBL
Match: A0A5D3DCK1 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00230 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.5e-108
Identity = 199/229 (86.90%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           MK PS ASSLIFLLLFVLFSCLGIS+ADSNNVFDTCPTA +R +FINGYHCKSPTLVTTS
Sbjct: 1   MKNPSLASSLIFLLLFVLFSCLGISLADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTS 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DFNSAKLT P+NTD+R NL++KIVTAADF GLNTLGLSISRTDL +DA+VS HSHPRATE
Sbjct: 61  DFNSAKLTEPVNTDDRINLVVKIVTAADFHGLNTLGLSISRTDLVIDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFFLNQGIVLAGFIDT+NQLFQT+LKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP
Sbjct: 121 MFFLNQGIVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGA+FDPAD SHFI+KFLKRL   SSQSNFK NPNVTL RYTSL
Sbjct: 181 GVVNINGAVFDPADSSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

[Close]

BLAST of HG10019462 vs. ExPASy TrEMBL
Match: A0A1S3CNX7 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503059 PE=3 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.5e-108
Identity = 199/229 (86.90%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           MK PS ASSLIFLLLFVLFSCLGIS+ADSNNVFDTCPTA +R +FINGYHCKSPTLVTTS
Sbjct: 1   MKNPSLASSLIFLLLFVLFSCLGISLADSNNVFDTCPTATDRIEFINGYHCKSPTLVTTS 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DFNSAKLT P+NTD+R NL++KIVTAADF GLNTLGLSISRTDL +DA+VS HSHPRATE
Sbjct: 61  DFNSAKLTEPVNTDDRINLVVKIVTAADFHGLNTLGLSISRTDLVIDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFFLNQGIVLAGFIDT+NQLFQT+LKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP
Sbjct: 121 MFFLNQGIVLAGFIDTRNQLFQTILKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGA+FDPAD SHFI+KFLKRL   SSQSNFK NPNVTL RYTSL
Sbjct: 181 GVVNINGAVFDPADSSHFIEKFLKRLTVPSSQSNFKLNPNVTLSRYTSL 229

[Close]

BLAST of HG10019462 vs. ExPASy TrEMBL
Match: A0A6J1DJ19 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111020943 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96
Identity = 179/229 (78.17%), Postives = 207/229 (90.39%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           MKKPSS SSLIFLLLFVLFSCLGISVADSNNVFDTCPTA N+++FING+ CK+PT+VTTS
Sbjct: 1   MKKPSS-SSLIFLLLFVLFSCLGISVADSNNVFDTCPTATNKSEFINGFPCKNPTIVTTS 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DFNSAKLTGP++TD++    + I+TAA+F GLNTLGLSISRTDLG DA+VS HSHPRATE
Sbjct: 61  DFNSAKLTGPVDTDDQFISSVNILTAAEFSGLNTLGLSISRTDLGTDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           +FF+NQGIVLAGF+DTKN+LFQ+ LKAGDV+VFPKGLLHFCLNSGYEPAI FSV+NSQNP
Sbjct: 121 IFFVNQGIVLAGFLDTKNRLFQSFLKAGDVMVFPKGLLHFCLNSGYEPAIIFSVFNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGAMF+PAD +H + KFL+RLK+LSS S+ KFNPNVTL  Y SL
Sbjct: 181 GVVNINGAMFEPADSNHLVHKFLERLKSLSSLSSLKFNPNVTLTTYISL 228

[Close]

BLAST of HG10019462 vs. ExPASy TrEMBL
Match: A0A6J1GAI2 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452269 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.3e-95
Identity = 181/229 (79.04%), Postives = 199/229 (86.90%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           M KPS  SSLIFLL+ V FSCLGISVADS+NVFD+CPTA +R  FING+ CK+PT+V T 
Sbjct: 1   MNKPS--SSLIFLLV-VFFSCLGISVADSHNVFDSCPTATDRIDFINGFPCKNPTIVRTD 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DF SAKLTGP+NTD+R + L+K+VTAADFPGLN+LGLSISRTDLG DA+VS HSHPRATE
Sbjct: 61  DFTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFF+NQGIVLAGFIDTKN+LFQ  LK GDVIVFPKGLLHFCLNSGYE A  FSVYNSQNP
Sbjct: 121 MFFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGAMF PAD SHFIDKFL +LKALSS  N KFNPNVTLPRY SL
Sbjct: 181 GVVNVNGAMFKPADSSHFIDKFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]

BLAST of HG10019462 vs. ExPASy TrEMBL
Match: A0A6J1KCN7 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493105 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.8e-94
Identity = 179/229 (78.17%), Postives = 199/229 (86.90%), Query Frame = 0


Query: 1   MKKPSSASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTS 60
           M KPS  SSLIFLLL V FSCLGI+VADS+NVFD+CPTA +R  F+NG+ CK+PT+V T 
Sbjct: 1   MNKPS--SSLIFLLL-VFFSCLGIAVADSHNVFDSCPTATDRIDFVNGFPCKNPTVVRTD 60

Query: 61  DFNSAKLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATE 120
           DF SAKLTGP+NTD+R + L+K+VTAADFPGLN+LGLSISRTDLG DA+VS HSHPRATE
Sbjct: 61  DFTSAKLTGPVNTDDRFSSLVKVVTAADFPGLNSLGLSISRTDLGTDAIVSPHSHPRATE 120

Query: 121 MFFLNQGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNP 180
           MFF+NQGIVLAGFIDTKN+LFQ  LK GDVIVFPKGLLHFCLNSGYE A  FSVYNSQNP
Sbjct: 121 MFFVNQGIVLAGFIDTKNRLFQEFLKPGDVIVFPKGLLHFCLNSGYETATIFSVYNSQNP 180

Query: 181 GVVILNGAMFDPADPSHFIDKFLKRLKALSSQSNFKFNPNVTLPRYTSL 230
           GVV +NGAMF+PAD SHFID FL +LKALSS  N KFNPNVTLPRY SL
Sbjct: 181 GVVNVNGAMFEPADSSHFIDMFLDKLKALSSLPNLKFNPNVTLPRYISL 226

[Close]

BLAST of HG10019462 vs. TAIR 10
Match: AT5G61750.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 208.8 bits (530), Expect = 4.7e-54
Identity = 101/170 (59.41%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 17  VLFSCLGISVA-DSNNVFDTCPTAPNRTQ--FINGYHCKSPTLVTTSDFNSAKLTGPINT 76
           ++F  + +SV+ DS+N+ DTCPTAP      FINGY CK+PT +T  DF S KLT   +T
Sbjct: 7   IVFCAIFLSVSGDSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDT 66

Query: 77  DNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIVLAGF 136
           DN     + ++TA +FPGLNTLGLS+SRTDL  D  V  HSHPR++EM F+ +G+V AGF
Sbjct: 67  DNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGF 126

Query: 137 IDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVV 184
           +DT N++FQTVL+ GDV VFPKGLLHFCL+ G+EPA +FS YNSQNPGVV
Sbjct: 127 VDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVV 176

[Close]

BLAST of HG10019462 vs. TAIR 10
Match: AT5G20630.1 (germin 3 )

HSP 1 Score: 132.1 bits (331), Expect = 5.6e-31
Identity = 79/212 (37.26%), Postives = 117/212 (55.19%), Query Frame = 0


Query: 13  LLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTSDFNSAKLTGPIN 72
           +++ + F    IS     +V D C   P   Q  +GY CK+P  VT +DF     TG   
Sbjct: 3   MIIQIFFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDF---AFTGLGT 62

Query: 73  TDNRSNLLMKIVTAADFP---GLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIV 132
             N SN++   VT A  P   G+N LG+S++R DL    ++ LH+HP A+E+  + QG +
Sbjct: 63  AGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTI 122

Query: 133 LAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVILNGAM 192
            AGFI + N+++   L  GD +VFP+GLLHF LNSG  PA++F  + S +PG+ IL  A+
Sbjct: 123 CAGFISSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFAL 182

Query: 193 FDPADPSHFI-------DKFLKRLKALSSQSN 215
           F    PS  +       D  +K+LK +   +N
Sbjct: 183 FANDLPSELVEATTFLSDAEVKKLKGVLGGTN 211

[Close]

BLAST of HG10019462 vs. TAIR 10
Match: AT5G38960.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 6.2e-30
Identity = 75/195 (38.46%), Postives = 110/195 (56.41%), Query Frame = 0


Query: 13  LLLFVLFSCLGISVA-DSNNVFDTC--PTAPNRTQFINGYHCKSPTLVTTSDFNSAKLTG 72
           +L  +  S L  ++A D + + D C     P    F+NG  CK P LVT  DF  + L  
Sbjct: 8   ILYLLAASTLPFAIASDPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDK 67

Query: 73  PINTDNR---SNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQ 132
              T++    SN  +  V     PGLNTLG+S+ R D G++     H+HPRATE+  + +
Sbjct: 68  ARTTESSPVGSN--VTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQE 127

Query: 133 GIVLAGFIDT--KNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVI 192
           G +  GF  +  +N+LF   L  GDV VFP+GL+HF +N G +PA++F+  +SQNPGV+I
Sbjct: 128 GTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVII 187

Query: 193 LNGAMF---DPADPS 197
           +   +F    P DP+
Sbjct: 188 IGNTLFGSKPPIDPN 200

[Close]

BLAST of HG10019462 vs. TAIR 10
Match: AT1G18970.1 (germin-like protein 4 )

HSP 1 Score: 127.5 bits (319), Expect = 1.4e-29
Identity = 72/179 (40.22%), Postives = 102/179 (56.98%), Query Frame = 0


Query: 12  FLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTSDFNSAKLTGPI 71
           FLL+F LF    +S +DS+ + D C      +  ING+ CKS   V+ SDF  + L GP+
Sbjct: 14  FLLMFCLFVIPSLS-SDSDPLQDFCVGDLKASASINGFPCKS--AVSASDFFYSGLGGPL 73

Query: 72  NTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLNQGIVLA 131
           +T N + + +       FPGLNTLG+S++  +L    +   H HPRATE+  + +G V  
Sbjct: 74  DTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEGSVFV 133

Query: 132 GFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVILNGAMF 191
           GF+ T N LF  VL AG+  V P+GL+HF  N G   A   + +NSQ PG V+L   +F
Sbjct: 134 GFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPSTLF 189

[Close]

BLAST of HG10019462 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-29
Identity = 74/190 (38.95%), Postives = 99/190 (52.11%), Query Frame = 0


Query: 6   SASSLIFLLLFVLFSCLGISVADSNNVFDTCPTAPNRTQFINGYHCKSPTLVTTSDFNSA 65
           ++ +L  LLL    S    S AD + + D C         ING+ CK    VT++DF S 
Sbjct: 2   ASPTLTLLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQ 61

Query: 66  KLTGPINTDNRSNLLMKIVTAADFPGLNTLGLSISRTDLGMDAMVSLHSHPRATEMFFLN 125
            L  P  T+N    L+        PGLNTLG+S+SR D     +   H+HPRATE+ F+ 
Sbjct: 62  GLAKPGLTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVL 121

Query: 126 QGIVLAGFIDTKNQLFQTVLKAGDVIVFPKGLLHFCLNSGYEPAISFSVYNSQNPGVVIL 185
           +G +  GF+ T N+L    LK GDV  FPKGL+HF  N+G  PA   + +NSQ PG   L
Sbjct: 122 EGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSL 181

Query: 186 NGAMFDPADP 196
              +F    P
Sbjct: 182 GATLFGSTPP 191

The following BLAST results are available for this feature:

BLAST of HG10019462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905670.1	5.9e-115	91.27	germin-like protein subfamily 3 member 4 [Benincasa hispida]	[more]
XP_008465454.1	1.6e-107	86.90	PREDICTED: germin-like protein subfamily 3 member 4 [Cucumis melo] >KAA0034959.1...	[more]
XP_022153439.1	3.6e-96	78.17	germin-like protein subfamily 3 member 4 [Momordica charantia]	[more]
XP_023522282.1	3.0e-95	79.04	germin-like protein subfamily 3 member 4 [Cucurbita pepo subsp. pepo]	[more]
XP_022948659.1	1.5e-94	79.04	germin-like protein subfamily 3 member 4 [Cucurbita moschata] >XP_022948660.1 ge...	[more]

BLAST of HG10019462 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLT3	6.7e-53	59.41	Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana OX=3702 GN=At5g...	[more]
Q2R352	2.4e-42	50.27	Germin-like protein 11-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g053735...	[more]
P45852	2.2e-32	45.57	Germin-like protein OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
P94072	7.9e-30	37.26	Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana OX=3702 GN=GER3...	[more]
Q7XSN6	1.4e-29	40.00	Germin-like protein 4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0617900...	[more]

BLAST of HG10019462 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCK1	7.5e-108	86.90	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199...	[more]
A0A1S3CNX7	7.5e-108	86.90	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103503059 PE=3 SV=1	[more]
A0A6J1DJ19	1.7e-96	78.17	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111020943 PE=3 SV=1	[more]
A0A6J1GAI2	7.3e-95	79.04	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452269 PE=3 SV=1	[more]
A0A6J1KCN7	2.8e-94	78.17	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493105 PE=3 SV=1	[more]

BLAST of HG10019462 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61750.1	4.7e-54	59.41	RmlC-like cupins superfamily protein	[more]
AT5G20630.1	5.6e-31	37.26	germin 3	[more]
AT5G38960.1	6.2e-30	38.46	RmlC-like cupins superfamily protein	[more]
AT1G18970.1	1.4e-29	40.22	germin-like protein 4	[more]
AT1G09560.1	3.1e-29	38.95	germin-like protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 113..133 score: 49.5 coord: 143..163 score: 54.04 coord: 176..191 score: 43.75
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 65..199 e-value: 1.4E-21 score: 87.7
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 69..184 e-value: 9.6E-29 score: 99.9
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 27..217 e-value: 3.6E-51 score: 175.4
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 15..208
None	No IPR available	PANTHER	PTHR31238:SF3	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4	coord: 15..208
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..21 score: 6.0
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 28..201 e-value: 4.74429E-61 score: 187.803
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 43..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10019462.1	HG10019462.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding