HG10019354 (gene) Bottle gourd (Hangzhou Gourd) v1
|
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCACATCTTCTTCTTCGTCTTCCACTCCACGACCAAGGATTTCCATGGCGCAGCTGGTAAAAGATCATGGATTCCCTTGCTCTGTTCTCTCTTGTTTTATCTGGGTATCATTTGGGCGGTGAGATACAAGACAAGACGAATGTTGAAGCCCATTTGGAGAAGCTGCTGGAAAGGGAAAAAGAAGACAAGATTTGCTGTCAAAGTATGTTGATGAATTAAAGAGGAAATGGGTTGAATTTGATTTGCTAAAGGAGGTGGATGCGCTAAGGAGGGCAAAGAGTCCGAGGGTTGAAGCTAAGGATGTGAGAAAATGGTCTTCAAGGGATTTCATTACTCTATTTTTCTTCTCTGTTTCTTTGGATTATTAAGGTTGTTTCAGTATTTTATTATTTTGGTGAGTATTATTTGGATAACAATTTTAACTTAAAGAAAAAAAAAAAGAAAAATCAAACATCTTATTCATTTAAACACAAAATCTATCGTGTGAGTAATCTTCAAATCATGGTAATGGTATTGGTGATGGCGAAGATAGCGGTGGAAGCATCGCCAATGAGAGAAGAGAAGGGAGTGAGGAGGCAAGGCAACGAATATCGGAGGTAGATGTTTCACATCTTCTTCTTCGTCTTCCACTCCACGACCAAGGATTTCCATGGCGCAGCTGGTAAAAGATCATGGATTCCCTTGCTCTGTTCTCTCTTGTTTTATCTGGGTATCATTTGGGCGGTGAGATACAAGACAAGACGAATGTTGAAGCCCATTTGGAGAAGCTGCTGGAAAGGGAAAAAGAAGACAAGATTTGCTGTCAAAATAGCGGTGGAAGCATCGCCAATGAGAGAAGAGAAGGGAGTGAGGAGGCAAGGCAACGAATATCGGAGGTAG ATGTTTCACATCTTCTTCTTCGTCTTCCACTCCACGACCAAGGATTTCCATGGCGCAGCTGGTAAAAGATCATGGATTCCCTTGCTCTGTTCTCTCTTGTTTTATCTGGGTATCATTTGGGCGGTGAGATACAAGACAAGACGAATGTTGAAGCCCATTTGGAGAAGCTGCTGGAAAGGGAAAAAGAAGACAAGATTTGCTGTCAAAATAGCGGTGGAAGCATCGCCAATGAGAGAAGAGAAGGGAGTGAGGAGGCAAGGCAACGAATATCGGAGGTAG MFHIFFFVFHSTTKDFHGAAGKRSWIPLLCSLLFYLGIIWAVRYKTRRMLKPIWRSCWKGKKKTRFAVKIAVEASPMREEKGVRRQGNEYRR Homology
BLAST of HG10019354 vs. NCBI nr
Match: XP_008447121.1 (PREDICTED: uncharacterized protein LOC103489644 [Cucumis melo] >KAA0051100.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYK02689.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 6.4e-12 Identity = 41/55 (74.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of HG10019354 vs. NCBI nr
Match: XP_038888007.1 (uncharacterized protein LOC120077946 [Benincasa hispida]) HSP 1 Score: 80.9 bits (198), Expect = 6.4e-12 Identity = 41/55 (74.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of HG10019354 vs. NCBI nr
Match: XP_004139828.2 (uncharacterized protein LOC101213346 [Cucumis sativus] >KGN44273.1 hypothetical protein Csa_016839 [Cucumis sativus]) HSP 1 Score: 80.9 bits (198), Expect = 6.4e-12 Identity = 41/55 (74.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of HG10019354 vs. NCBI nr
Match: KAG7012062.1 (hypothetical protein SDJN02_26970, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of HG10019354 vs. NCBI nr
Match: XP_022968874.1 (uncharacterized protein LOC111468053 [Cucurbita maxima]) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-11 Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of HG10019354 vs. ExPASy TrEMBL
Match: A0A5A7U7C4 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00150 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.1e-12 Identity = 41/55 (74.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of HG10019354 vs. ExPASy TrEMBL
Match: A0A0A0K424 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G237880 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.1e-12 Identity = 41/55 (74.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of HG10019354 vs. ExPASy TrEMBL
Match: A0A1S3BHA3 (uncharacterized protein LOC103489644 OS=Cucumis melo OX=3656 GN=LOC103489644 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.1e-12 Identity = 41/55 (74.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of HG10019354 vs. ExPASy TrEMBL
Match: A0A6J1I0X4 (uncharacterized protein LOC111468053 OS=Cucurbita maxima OX=3661 GN=LOC111468053 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11 Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of HG10019354 vs. ExPASy TrEMBL
Match: A0A6J1GKU6 (uncharacterized protein LOC111454873 OS=Cucurbita moschata OX=3662 GN=LOC111454873 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11 Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of HG10019354 vs. TAIR 10
Match: AT3G12870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 3.0e-07 Identity = 37/114 (32.46%), Postives = 55/114 (48.25%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|