
HG10019282 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCATATGGGTCGTCTTCTTCCCTTTTCTCGCTCCGCCAGTGCTCGGTTGTCGAGTGGAAGGGTGGAAATTTGTCGAGAAAAAGAAAAAACTGGACGGAAGCAAGGCCCGGGGGAGTGGAGGGAAATGGGGGAAAAACTGGACGATGAAGACGAAATCTTGAAGCAAGTATTTGGCGATTCTTCGGGAGACGAAGGCTTCGAAGATCAAACTGTAATGAATGATTTATCGTATGAAGTGGGTCATATTCACAAATGGGAGCAGGTCAAGGAAATCAAAGGGTTGTGGCTGTGCAGAATCTTCCTCTCGCCCCAACACCAATCATCACTCCTCTCCGCAATCCGAAACGGTTCGTAATTTCTTATCTCAAGTTGTTCCGTAACATGAAACTCATCTTCGTTCTGTTTTCGAATTTGATCCCTGAACTTAAGATTTCATTGAATGAACCATAGGCTTACGTTTTACAATTTCAATATGTTTAGCGTACCCTCTTTATGAGATTGTAGATACTTGAATCATGTTTGGAAATGTTCATGAAACTGTGCCCATAAAGTCATGCTAATCTTATACTCTTATGTTTTCAGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGTACCTTCAGTTTTTAATCTTGATAAGCTTATTATTAGGGGTCTATTATATCTGTTGTTATCCCCAGAAACCAATTCTTCACTGTTACTGAGCAAGCACTGAGGATTTTAAATGCTGTAGTGTTGTTGGATTTTGTTCTTGAAGTTTAGACTAGGATAATATTCTTAACTACTGTTACTTTTTCTCTTCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCAGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGATTGTGGATCGCTATAATGGAGATAAGGTTGATTGTCCTCTTCCATCAGACATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAATGTTTATCAACCAGGTGAGGTGCGACGATGACCCATTTCTATTCTATTGTGATTAGACATCTGTTTGAACCGAACCTCCAGGACGATAGCTTCACAGGCACTAGGGGCTGTTTGGAAACAGTTTTTTTTGATGTAGAACTAGATCATCTTTTTGTTATAGTTGAATGTAGTTTAAGAGCCAGTTTGCAAAACAGTTTCTGAAAACAGAATTTGGAGAATAACCCTGTAGCCACTAAGAATCCAAGATTGTGATGTTTGGTCTGTCAAGATGAAGGGTGTACTTTAACAAGGAATAAAAACAGTTTTGTATTTTTATATTTTATTTGAGAGTTTAACAATAGGTGGGAGTGAGAGTGGGGGAATTTGAACGTTTGACCTCTTAGTTTTAGTACAAGAACCATGGTATAAGAGATCGAACCCTCGACCTCTAGGGAGTAATGTCATGTCATTTACCGTTGAGCTAAGCTTGCTTTGACGTTTTACCTCTTAGTTGAGTGCGTCTGTCTTAGTTAGTTGAGTTGTGCTGGGGTTAACAAAAAAGAAAGAGTATCTTGTGGTGTAGTATTTTGATTCATTCATTTCATATCTATGTTATGAATTGTGTTTATAATATTTCATTTGGATTATTTGACCACGTTGTGGACACTTCAACTGCAATCATGAGTAGATAGGAAGCCTTAATATTCTGCTAATGTGATAAAAATGATTTGTGAATGGCATGTTTTTAAAGCACTCTGGGCCATGTTGTTTGAGAAACTTTATATCTGACGTTGCTTGCCTTTTGTTTATCTTCATTAGCATTACATTACAATTCATCTTAGCTTTCCTCATTAGTTATTGATTCACGACATTTTTATAACTTCCCTCTAATATTCTCTATAAAGGGAATCTGTGCTCATGTTGACCTTATGCGTTTCGAAGATGGAATTGCCATTGTCTCCCTCGAGTCACCATGTGTGATGCATTTTACCCGAGTTGATGAAACTTCCTGTGATCCTTCAATCAAGGGAGAAGTCGATTTATCGGCATCGAAAGTGCCCGTATATCTAAACCCAGGATCTCTTGTTATATTGTGGGGCGAAGCCCGCTATCTCTGGAAGCATGAGATAAATCGTAAGCCCGGGTTTCAAATATGGGAAGGCCAGGAACTTACTCAGGGAAGGCGAACTTCCATTACACTGAGAAAGCTCTGTCATGTTGAATAA ATGATCCATATGGGTCGTCTTCTTCCCTTTTCTCGCTCCGCCAGTGCTCGGTTGTCGAGTGGAAGGGTGGAAATTTGTCGAGAAAAAGAAAAAACTGGACGGAAGCAAGGCCCGGGGGAGTGGAGGGAAATGGGGGAAAAACTGGACGATGAAGACGAAATCTTGAAGCAAGTATTTGGCGATTCTTCGGGAGACGAAGGCTTCGAAGATCAAACTGTAATGAATGATTTATCGTATGAAGTGGGTCATATTCACAAATGGGAGCAGGTCAAGGAAATCAAAGGGTTGTGGCTGTGCAGAATCTTCCTCTCGCCCCAACACCAATCATCACTCCTCTCCGCAATCCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCAGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGATTGTGGATCGCTATAATGGAGATAAGGTTGATTGTCCTCTTCCATCAGACATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAATGTTTATCAACCAGGTGAGGGAATCTGTGCTCATGTTGACCTTATGCGTTTCGAAGATGGAATTGCCATTGTCTCCCTCGAGTCACCATGTGTGATGCATTTTACCCGAGTTGATGAAACTTCCTGTGATCCTTCAATCAAGGGAGAAGTCGATTTATCGGCATCGAAAGTGCCCGTATATCTAAACCCAGGATCTCTTGTTATATTGTGGGGCGAAGCCCGCTATCTCTGGAAGCATGAGATAAATCGTAAGCCCGGGTTTCAAATATGGGAAGGCCAGGAACTTACTCAGGGAAGGCGAACTTCCATTACACTGAGAAAGCTCTGTCATGTTGAATAA ATGATCCATATGGGTCGTCTTCTTCCCTTTTCTCGCTCCGCCAGTGCTCGGTTGTCGAGTGGAAGGGTGGAAATTTGTCGAGAAAAAGAAAAAACTGGACGGAAGCAAGGCCCGGGGGAGTGGAGGGAAATGGGGGAAAAACTGGACGATGAAGACGAAATCTTGAAGCAAGTATTTGGCGATTCTTCGGGAGACGAAGGCTTCGAAGATCAAACTGTAATGAATGATTTATCGTATGAAGTGGGTCATATTCACAAATGGGAGCAGGTCAAGGAAATCAAAGGGTTGTGGCTGTGCAGAATCTTCCTCTCGCCCCAACACCAATCATCACTCCTCTCCGCAATCCGAAACGAAGGGTGGTTCATGGAAGCCTCTCAAAATCAGGCCATGAGGTTTGGAAACCTTCCAACATGGGCTGTTGAACTTTCAGATTCTGTTTATGAGGCAGTGCTTTCAAGTAACCACATGACAGATACTTTGATTGTGGATCGCTATAATGGAGATAAGGTTGATTGTCCTCTTCCATCAGACATTTTGTGGAGAGAACCACTCTTTGATCAAATGATAGCTAATGTTTATCAACCAGGTGAGGGAATCTGTGCTCATGTTGACCTTATGCGTTTCGAAGATGGAATTGCCATTGTCTCCCTCGAGTCACCATGTGTGATGCATTTTACCCGAGTTGATGAAACTTCCTGTGATCCTTCAATCAAGGGAGAAGTCGATTTATCGGCATCGAAAGTGCCCGTATATCTAAACCCAGGATCTCTTGTTATATTGTGGGGCGAAGCCCGCTATCTCTGGAAGCATGAGATAAATCGTAAGCCCGGGTTTCAAATATGGGAAGGCCAGGAACTTACTCAGGGAAGGCGAACTTCCATTACACTGAGAAAGCTCTGTCATGTTGAATAA MIHMGRLLPFSRSASARLSSGRVEICREKEKTGRKQGPGEWREMGEKLDDEDEILKQVFGDSSGDEGFEDQTVMNDLSYEVGHIHKWEQVKEIKGLWLCRIFLSPQHQSSLLSAIRNEGWFMEASQNQAMRFGNLPTWAVELSDSVYEAVLSSNHMTDTLIVDRYNGDKVDCPLPSDILWREPLFDQMIANVYQPGEGICAHVDLMRFEDGIAIVSLESPCVMHFTRVDETSCDPSIKGEVDLSASKVPVYLNPGSLVILWGEARYLWKHEINRKPGFQIWEGQELTQGRRTSITLRKLCHVE Homology
BLAST of HG10019282 vs. NCBI nr
Match: XP_038905579.1 (uncharacterized protein LOC120091559 [Benincasa hispida]) HSP 1 Score: 522.3 bits (1344), Expect = 2.8e-144 Identity = 248/260 (95.38%), Postives = 253/260 (97.31%), Query Frame = 0
BLAST of HG10019282 vs. NCBI nr
Match: XP_004152257.1 (uncharacterized protein LOC101207942 [Cucumis sativus]) HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140 Identity = 241/260 (92.69%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of HG10019282 vs. NCBI nr
Match: XP_008454361.1 (PREDICTED: uncharacterized protein LOC103494783 [Cucumis melo] >KAA0044368.1 alkylated DNA repair protein alkB-like protein 8 [Cucumis melo var. makuwa] >TYK29496.1 alkylated DNA repair protein alkB-like protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 493.0 bits (1268), Expect = 1.8e-135 Identity = 235/260 (90.38%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of HG10019282 vs. NCBI nr
Match: XP_022948590.1 (uncharacterized protein LOC111452220 [Cucurbita moschata]) HSP 1 Score: 485.7 bits (1249), Expect = 2.9e-133 Identity = 228/268 (85.07%), Postives = 248/268 (92.54%), Query Frame = 0
BLAST of HG10019282 vs. NCBI nr
Match: XP_023524850.1 (uncharacterized protein LOC111788655 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 484.6 bits (1246), Expect = 6.4e-133 Identity = 227/268 (84.70%), Postives = 248/268 (92.54%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy Swiss-Prot
Match: Q9UT12 (Uncharacterized protein P8A3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP8A3.02c PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.4e-12 Identity = 47/132 (35.61%), Postives = 70/132 (53.03%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy Swiss-Prot
Match: Q8RWY1 (Alkylated DNA repair protein ALKBH8 homolog OS=Arabidopsis thaliana OX=3702 GN=ALKBH8 PE=2 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 7.6e-12 Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy Swiss-Prot
Match: Q07G10 (Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis OX=8364 GN=alkbh8 PE=2 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 9.9e-12 Identity = 70/239 (29.29%), Postives = 99/239 (41.42%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy Swiss-Prot
Match: Q95K79 (Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis OX=9541 GN=ALKBH8 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.7e-11 Identity = 50/130 (38.46%), Postives = 63/130 (48.46%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy Swiss-Prot
Match: Q5UR03 (Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L905 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10 Identity = 52/215 (24.19%), Postives = 96/215 (44.65%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy TrEMBL
Match: A0A0A0KV56 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001660 PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 8.9e-141 Identity = 241/260 (92.69%), Postives = 249/260 (95.77%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy TrEMBL
Match: A0A5A7TNC5 (Alkylated DNA repair protein alkB-like protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00950 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 8.7e-136 Identity = 235/260 (90.38%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy TrEMBL
Match: A0A1S3BYI6 (uncharacterized protein LOC103494783 OS=Cucumis melo OX=3656 GN=LOC103494783 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 8.7e-136 Identity = 235/260 (90.38%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy TrEMBL
Match: A0A6J1GAA7 (uncharacterized protein LOC111452220 OS=Cucurbita moschata OX=3662 GN=LOC111452220 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 1.4e-133 Identity = 228/268 (85.07%), Postives = 248/268 (92.54%), Query Frame = 0
BLAST of HG10019282 vs. ExPASy TrEMBL
Match: A0A6J1KDK2 (uncharacterized protein LOC111492881 OS=Cucurbita maxima OX=3661 GN=LOC111492881 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 9.0e-133 Identity = 226/260 (86.92%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of HG10019282 vs. TAIR 10
Match: AT4G02485.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 273.1 bits (697), Expect = 2.7e-73 Identity = 146/255 (57.25%), Postives = 174/255 (68.24%), Query Frame = 0
BLAST of HG10019282 vs. TAIR 10
Match: AT1G31600.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 72.8 bits (177), Expect = 5.4e-13 Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of HG10019282 vs. TAIR 10
Match: AT1G31600.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 72.8 bits (177), Expect = 5.4e-13 Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of HG10019282 vs. TAIR 10
Match: AT1G31600.3 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 72.8 bits (177), Expect = 5.4e-13 Identity = 43/118 (36.44%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of HG10019282 vs. TAIR 10
Match: AT4G20350.1 (oxidoreductases ) HSP 1 Score: 42.7 bits (99), Expect = 6.0e-04 Identity = 32/103 (31.07%), Postives = 45/103 (43.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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