HG10019115 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGCAGACTCGGGAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACCAACATCACTGAAATTGCTCTTAAAACCATTCCTTCTGCTTCCAAAATCGAAATCAAGCGCGTCCTTGAGAGCCTTTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAACATGGAGGGGAAGAAAAAGAAGCGTGGAGGGCTTTTGATCGCAAAGCCAGATTACAAGAAGGCCTATGTTACTCTCAGGAATTCCTTGTCAATCTCTCCGGACGTGTACCCGATCCGGATTATAGAGGAGGACAAAAGGAATATGAATAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCCAAGAGGCATTGGCTGCATGAGAAAGAGCCTGTAGAATCCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAACTGGCGGCGCTGAAACTGTTGAACCATCGACAAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAG ATGGGAAGCAGACTCGGGAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACCAACATCACTGAAATTGCTCTTAAAACCATTCCTTCTGCTTCCAAAATCGAAATCAAGCGCGTCCTTGAGAGCCTTTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAACATGGAGGGGAAGAAAAAGAAGCGTGGAGGGCTTTTGATCGCAAAGCCAGATTACAAGAAGGCCTATGTTACTCTCAGGAATTCCTTGTCAATCTCTCCGGACGTGTACCCGATCCGGATTATAGAGGAGGACAAAAGGAATATGAATAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCCAAGAGGCATTGGCTGCATGAGAAAGAGCCTGTAGAATCCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAACTGGCGGCGCTGAAACTGTTGAACCATCGACAAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAG ATGGGAAGCAGACTCGGGAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACCAACATCACTGAAATTGCTCTTAAAACCATTCCTTCTGCTTCCAAAATCGAAATCAAGCGCGTCCTTGAGAGCCTTTACGGCTTTGAGGTCGATAAAGTTCGAACTCTCAACATGGAGGGGAAGAAAAAGAAGCGTGGAGGGCTTTTGATCGCAAAGCCAGATTACAAGAAGGCCTATGTTACTCTCAGGAATTCCTTGTCAATCTCTCCGGACGTGTACCCGATCCGGATTATAGAGGAGGACAAAAGGAATATGAATAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCCAAGAGGCATTGGCTGCATGAGAAAGAGCCTGTAGAATCCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAACTGGCGGCGCTGAAACTGTTGAACCATCGACAAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAG MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVRTLNMEGKKKKRGGLLIAKPDYKKAYVTLRNSLSISPDVYPIRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVESKTYKGFADRGRRRTGGAETVEPSTKFPWSSMRSGR Homology
BLAST of HG10019115 vs. NCBI nr
Match: XP_022985025.1 (uncharacterized protein LOC111483116 [Cucurbita maxima]) HSP 1 Score: 325.1 bits (832), Expect = 3.7e-85 Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of HG10019115 vs. NCBI nr
Match: XP_023531609.1 (uncharacterized protein LOC111793793 [Cucurbita pepo subsp. pepo] >KAG6600654.1 hypothetical protein SDJN03_05887, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031291.1 rplW, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323.6 bits (828), Expect = 1.1e-84 Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of HG10019115 vs. NCBI nr
Match: XP_023552749.1 (uncharacterized protein LOC111810290 [Cucurbita pepo subsp. pepo] >XP_023552752.1 uncharacterized protein LOC111810293 [Cucurbita pepo subsp. pepo] >XP_023553074.1 uncharacterized protein LOC111810580 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84 Identity = 163/173 (94.22%), Postives = 169/173 (97.69%), Query Frame = 0
BLAST of HG10019115 vs. NCBI nr
Match: XP_038905477.1 (uncharacterized protein LOC120091488 [Benincasa hispida] >XP_038905478.1 uncharacterized protein LOC120091488 [Benincasa hispida] >XP_038905479.1 uncharacterized protein LOC120091488 [Benincasa hispida] >XP_038905480.1 uncharacterized protein LOC120091488 [Benincasa hispida]) HSP 1 Score: 322.0 bits (824), Expect = 3.1e-84 Identity = 166/173 (95.95%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of HG10019115 vs. NCBI nr
Match: XP_004137193.1 (uncharacterized protein LOC101221365 [Cucumis sativus] >KGN53646.1 hypothetical protein Csa_014646 [Cucumis sativus]) HSP 1 Score: 321.2 bits (822), Expect = 5.3e-84 Identity = 165/174 (94.83%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy Swiss-Prot
Match: Q605B4 (50S ribosomal protein L23 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=rplW PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.5e-07 Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy Swiss-Prot
Match: Q0I161 (50S ribosomal protein L23 OS=Haemophilus somnus (strain 129Pt) OX=205914 GN=rplW PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.1e-07 Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy Swiss-Prot
Match: P55839 (50S ribosomal protein L23 OS=Aggregatibacter actinomycetemcomitans OX=714 GN=rplW PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06 Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy Swiss-Prot
Match: Q0ABH3 (50S ribosomal protein L23 OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=rplW PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy Swiss-Prot
Match: A0KF23 (50S ribosomal protein L23 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=rplW PE=3 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06 Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy TrEMBL
Match: A0A6J1JA70 (uncharacterized protein LOC111483116 OS=Cucurbita maxima OX=3661 GN=LOC111483116 PE=3 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.8e-85 Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy TrEMBL
Match: A0A0A0L0J2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095560 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 2.6e-84 Identity = 165/174 (94.83%), Postives = 170/174 (97.70%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy TrEMBL
Match: A0A6J1EUM4 (uncharacterized protein LOC111436066 OS=Cucurbita moschata OX=3662 GN=LOC111436066 PE=3 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.4e-84 Identity = 163/173 (94.22%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy TrEMBL
Match: A0A6J1FSK6 (uncharacterized protein LOC111448049 OS=Cucurbita moschata OX=3662 GN=LOC111448049 PE=3 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 5.7e-84 Identity = 165/173 (95.38%), Postives = 166/173 (95.95%), Query Frame = 0
BLAST of HG10019115 vs. ExPASy TrEMBL
Match: A0A5D3CZJ7 (Nucleotide-binding, alpha-beta plait OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00540 PE=3 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83 Identity = 165/174 (94.83%), Postives = 168/174 (96.55%), Query Frame = 0
BLAST of HG10019115 vs. TAIR 10
Match: AT4G39880.1 (Ribosomal protein L23/L15e family protein ) HSP 1 Score: 203.8 bits (517), Expect = 1.2e-52 Identity = 115/175 (65.71%), Postives = 130/175 (74.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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