Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTAGAGATCTGGATAAATGATAAAGTTAAAAGTAAGTTGTGACTATAGATTTAAGTTGTCATATTCAAAATCATGTCGATCAAACATAGTAAATCAGTTAATGTTTGATTTAACACCTTTAAACACAATTTTAATAACTATGAAATTTTATTTTAAAAGATTAAAAGCATGTTTAGTAGTGGTTTTGAATATGACAATAGCTATCTTTTTTTATATCTCTCTGTTTTTCTTTTTAAAGTACGTCTATGAGAGATAAAGACAGTGTGATTGAATCACTGATTATTAATTTTCTTTTTTGATGTGTTCTTACAGAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG
mRNA sequence
ATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTAGAGATCTGGATAAATGATAAAGTTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG
Coding sequence (CDS)
ATGGGAGAAGAGCAAAAAGACCCTTTTAAGGGAGTGGACTGGAAAGCCGTGGGTGGGGATATGCAGAAAAATCCCAGCGCTACAAACATTATAAAGAAAAGGCGTCCAACAAAAATTAGGCAAATTCCAGATTATTATTTTCTTCCTAGAAGATCCCTTCCTTCTGCCATTGCATTCTATGGGGCCTGTATTGCAGGTGGAATTGGTGCTGGTATGCTGGTAGAGATCTGGATAAATGATAAAGTTAAAAAGGATGGAGGTGTCATCTGGGAGTTTGACAAGTAG
Protein sequence
MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYGACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK
Homology
BLAST of HG10013188 vs. NCBI nr
Match:
XP_004133805.1 (uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical protein Csa_009724 [Cucumis sativus])
HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0
Query: 2 GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
G EQKDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11 GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70
Query: 62 ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
ACIAGGIGAGMLVEIWINDK+KKDGGVIWEFDK
Sbjct: 71 ACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103
BLAST of HG10013188 vs. NCBI nr
Match:
XP_023522177.1 (uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 183.7 bits (465), Expect = 7.2e-43
Identity = 83/94 (88.30%), Postives = 90/94 (95.74%), Query Frame = 0
Query: 1 MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1 MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60
Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
GACIAGGIGAGMLVEIWINDKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVVWEFDK 94
BLAST of HG10013188 vs. NCBI nr
Match:
XP_008437869.1 (PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 uncharacterized protein E6C27_scaffold171G00910 [Cucumis melo var. makuwa] >TYK20827.1 uncharacterized protein E5676_scaffold291G00890 [Cucumis melo var. makuwa])
HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 2 GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
G EQKDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP +AFYG
Sbjct: 11 GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70
Query: 62 ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
ACIAGGIGAGMLVE+WINDK+KKDGGVIWEFDK
Sbjct: 71 ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
BLAST of HG10013188 vs. NCBI nr
Match:
XP_022942020.1 (uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothetical protein SDJN03_10245, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028536.1 hypothetical protein SDJN02_09717 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 181.4 bits (459), Expect = 3.6e-42
Identity = 82/94 (87.23%), Postives = 89/94 (94.68%), Query Frame = 0
Query: 1 MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1 MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60
Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94
BLAST of HG10013188 vs. NCBI nr
Match:
XP_022975548.1 (uncharacterized protein LOC111475080 [Cucurbita maxima])
HSP 1 Score: 178.3 bits (451), Expect = 3.0e-41
Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = 0
Query: 1 MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSL S +AFY
Sbjct: 1 MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFY 60
Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94
BLAST of HG10013188 vs. ExPASy TrEMBL
Match:
A0A0A0L8I7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 9.2e-44
Identity = 86/93 (92.47%), Postives = 90/93 (96.77%), Query Frame = 0
Query: 2 GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
G EQKDP KGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRRSLPS +AFYG
Sbjct: 11 GVEQKDPLKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRSLPSVMAFYG 70
Query: 62 ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
ACIAGGIGAGMLVEIWINDK+KKDGGVIWEFDK
Sbjct: 71 ACIAGGIGAGMLVEIWINDKIKKDGGVIWEFDK 103
BLAST of HG10013188 vs. ExPASy TrEMBL
Match:
A0A5D3DB39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00890 PE=4 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 7.8e-43
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 2 GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
G EQKDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP +AFYG
Sbjct: 11 GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70
Query: 62 ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
ACIAGGIGAGMLVE+WINDK+KKDGGVIWEFDK
Sbjct: 71 ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
BLAST of HG10013188 vs. ExPASy TrEMBL
Match:
A0A1S3AV52 (uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=4 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 7.8e-43
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 2 GEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFYG 61
G EQKDPFKGVDWKAVGGDMQK+PS+TNIIKKRRPTKIRQIPDYYFLPRR LP +AFYG
Sbjct: 11 GVEQKDPFKGVDWKAVGGDMQKDPSSTNIIKKRRPTKIRQIPDYYFLPRRPLPYVMAFYG 70
Query: 62 ACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
ACIAGGIGAGMLVE+WINDK+KKDGGVIWEFDK
Sbjct: 71 ACIAGGIGAGMLVEMWINDKIKKDGGVIWEFDK 103
BLAST of HG10013188 vs. ExPASy TrEMBL
Match:
A0A6J1FVE8 (uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC111447184 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 1.7e-42
Identity = 82/94 (87.23%), Postives = 89/94 (94.68%), Query Frame = 0
Query: 1 MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSLPS +AFY
Sbjct: 1 MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLPSVLAFY 60
Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94
BLAST of HG10013188 vs. ExPASy TrEMBL
Match:
A0A6J1IJJ2 (uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080 PE=4 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41
Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = 0
Query: 1 MGEEQKDPFKGVDWKAVGGDMQKNPSATNIIKKRRPTKIRQIPDYYFLPRRSLPSAIAFY 60
M EE KDPFKGVDWKAVGGDMQK+PS+ NI+KKRRPTK+RQIP+YYFLPRRSL S +AFY
Sbjct: 1 MAEEAKDPFKGVDWKAVGGDMQKDPSSINILKKRRPTKVRQIPEYYFLPRRSLSSVLAFY 60
Query: 61 GACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
GACIAGGIGAGMLVEIWI DKVKKDGGV+WEFDK
Sbjct: 61 GACIAGGIGAGMLVEIWIKDKVKKDGGVVWEFDK 94
BLAST of HG10013188 vs. TAIR 10
Match:
AT5G16950.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 94.7 bits (234), Expect = 4.1e-20
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
Query: 3 EEQKDPFKGVDWKAVGGDMQKNPSATNI-----IKKRRPTKIRQIPDYYFLPRRSLPSAI 62
E KDP+KG +W + K P+ + + +K+ P + + YFLPR+ P A+
Sbjct: 4 EGAKDPWKGEEW-GTENEKTKKPTTSGVKTVTRARKQIPRGLEDKYEAYFLPRKPWPRAL 63
Query: 63 AFYGACIAGGIGAGMLVEIWINDKVKKDGGVIWEFDK 95
A+YG+ I GGIGAGM++E WIN KVK+DGGVIWEFDK
Sbjct: 64 AYYGSFILGGIGAGMVIEAWINKKVKEDGGVIWEFDK 99
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_004133805.1 | 1.9e-43 | 92.47 | uncharacterized protein LOC101207877 [Cucumis sativus] >KGN56411.1 hypothetical ... | [more] |
XP_023522177.1 | 7.2e-43 | 88.30 | uncharacterized protein LOC111786056 [Cucurbita pepo subsp. pepo] | [more] |
XP_008437869.1 | 1.6e-42 | 90.32 | PREDICTED: uncharacterized protein LOC103483172 [Cucumis melo] >KAA0048876.1 unc... | [more] |
XP_022942020.1 | 3.6e-42 | 87.23 | uncharacterized protein LOC111447184 [Cucurbita moschata] >KAG6597065.1 hypothet... | [more] |
XP_022975548.1 | 3.0e-41 | 86.17 | uncharacterized protein LOC111475080 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L8I7 | 9.2e-44 | 92.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119440 PE=4 SV=1 | [more] |
A0A5D3DB39 | 7.8e-43 | 90.32 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3AV52 | 7.8e-43 | 90.32 | uncharacterized protein LOC103483172 OS=Cucumis melo OX=3656 GN=LOC103483172 PE=... | [more] |
A0A6J1FVE8 | 1.7e-42 | 87.23 | uncharacterized protein LOC111447184 OS=Cucurbita moschata OX=3662 GN=LOC1114471... | [more] |
A0A6J1IJJ2 | 1.5e-41 | 86.17 | uncharacterized protein LOC111475080 OS=Cucurbita maxima OX=3661 GN=LOC111475080... | [more] |
Match Name | E-value | Identity | Description | |
AT5G16950.1 | 4.1e-20 | 47.42 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0... | [more] |