HG10013156 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10013156
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Glycosyltransferase family 28 protein
Location	Chr01: 27336320 .. 27336655 (+)
RNA-Seq Expression	HG10013156
Synteny	HG10013156

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAATTGGGTATATGGGATTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTTCCGCCGCCCTTCCACGGCGGATCACGGAGGTTCTTCTCCAACAAAGTCTCCCACTTCCACTTTTCTGATCTCATTCCATCGCCACCCCCGCCGCACTCCACCGTGAATGGGTCCTTAAAAAAAAAGCCGGCGGTGGACGAATTGAAGAACAAGCTCAAGAAATTCATAGCCACGTTCAGGTTTTCTTCAATTTTTAGTAGAATCGGCTCTTGGAGGAAGAACCAAATCCAAGTATGA

mRNA sequence

ATGAGAGAATTGGGTATATGGGATTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTTCCGCCGCCCTTCCACGGCGGATCACGGAGGTTCTTCTCCAACAAAGTCTCCCACTTCCACTTTTCTGATCTCATTCCATCGCCACCCCCGCCGCACTCCACCGTGAATGGGTCCTTAAAAAAAAAGCCGGCGGTGGACGAATTGAAGAACAAGCTCAAGAAATTCATAGCCACGTTCAGGTTTTCTTCAATTTTTAGTAGAATCGGCTCTTGGAGGAAGAACCAAATCCAAGTATGA

Coding sequence (CDS)

ATGAGAGAATTGGGTATATGGGATTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTTCCGCCGCCCTTCCACGGCGGATCACGGAGGTTCTTCTCCAACAAAGTCTCCCACTTCCACTTTTCTGATCTCATTCCATCGCCACCCCCGCCGCACTCCACCGTGAATGGGTCCTTAAAAAAAAAGCCGGCGGTGGACGAATTGAAGAACAAGCTCAAGAAATTCATAGCCACGTTCAGGTTTTCTTCAATTTTTAGTAGAATCGGCTCTTGGAGGAAGAACCAAATCCAAGTATGA

Protein sequence

MRELGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPPPHSTVNGSLKKKPAVDELKNKLKKFIATFRFSSIFSRIGSWRKNQIQV

Homology

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BLAST of HG10013156 vs. NCBI nr
Match: KAE8650237.1 (hypothetical protein Csa_011169 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40
Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MRELGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPS 60
           MREL +WDCGSPLYDSYELASLAHLIDRNL+AFPPP+H GSRR  SNKVSHFHFS L  +
Sbjct: 10  MRELSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSHL--T 69

Query: 61  PPPPHSTVNGSLKKKP--AVDELKNKLKKFIATFRFSSIFSRIGSWRKNQIQV 112
           PPPP + +N SL+KKP   VDELKNKLKKF +TFRFSSI +R G WRK Q QV
Sbjct: 70  PPPPSAVINASLEKKPPAVVDELKNKLKKFKSTFRFSSISNRFGLWRKKQFQV 120

[Close]

BLAST of HG10013156 vs. NCBI nr
Match: TYK17659.1 (glycosyltransferase family 28 protein [Cucumis melo var. makuwa])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 6   IWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPPPH 65
           +WDCGSPLYDSYELASLAHLIDRNL+AFPPP+H GSRR  SNKVSHFHFS  IP PPP  
Sbjct: 7   VWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIPPPPP-- 66

Query: 66  STVNGSLKKK-PAVDEL-KNKLKKFIATFRFSSIFSRIGSWRKNQIQV 112
           S VNGS KKK PAVDEL KNK+KK  +TFRFSSI S  G WRK QIQV
Sbjct: 67  SAVNGSFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of HG10013156 vs. NCBI nr
Match: KAA0048909.1 (glycosyltransferase family 28 protein [Cucumis melo var. makuwa])

HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37
Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 6   IWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPPPH 65
           +WDCGSPLYDSYELASLAHLIDRNL+AFPPP+H GSRR  SNKVSHFHFS  IP PPP  
Sbjct: 7   VWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIPPPPP-- 66

Query: 66  STVNGSLKKK-PAVDEL-KNKLKKFIATFRFSSIFSRIGSWRKNQIQV 112
           S VNGS KKK PAVDEL KNK+KK  +TFRFSSI S  G WRK QIQV
Sbjct: 67  SAVNGSFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of HG10013156 vs. NCBI nr
Match: KAG6597095.1 (Protein ENHANCED DISEASE RESISTANCE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 68/92 (73.91%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 3  ELGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPP 62
          ELG+WDCGSPLYDSYELASLAH+IDR+LMA PPP +GGSRRFFSNKVS  HFSD++PSPP
Sbjct: 4  ELGVWDCGSPLYDSYELASLAHIIDRHLMALPPPHYGGSRRFFSNKVS--HFSDIMPSPP 63

Query: 63 PPHSTVNGSLKKKPAVDELKNKLKKFIATFRF 95
             ST    LKKKP V E+KNKLKKF  T+ F
Sbjct: 64 LSTST----LKKKP-VGEMKNKLKKFKTTYTF 88

[Close]

BLAST of HG10013156 vs. NCBI nr
Match: PRQ58407.1 (hypothetical protein RchiOBHm_Chr1g0358991 [Rosa chinensis])

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12
Identity = 51/121 (42.15%), Postives = 61/121 (50.41%), Query Frame = 0


Query: 4   LGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPP 63
           L IWDCGSPLYDSYELAS++HLI+R+LMAFP    GGS + F  K SH   S    +   
Sbjct: 15  LAIWDCGSPLYDSYELASVSHLIERHLMAFPS--LGGSSKRFIAKFSHSSSSKTTSTTST 74

Query: 64  PHSTVNGS----------------LKKKPAVDELKNKLKKFIATFRFSSIFSRIGSWRKN 109
                 GS                 K+K      K K KK + T  FS  +SR G WRK 
Sbjct: 75  TMKEAKGSDSMEENLSKILGIKKMWKRKGLFGATKEKTKK-MKTTGFSGFYSRFGLWRKK 132

[Close]

BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A0A0L377 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119750 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.0e-41
Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 0


Query: 1   MRELGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPS 60
           MREL +WDCGSPLYDSYELASLAHLIDRNL+AFPPP+H GSRR  SNKVSHFHFS L  +
Sbjct: 2   MRELSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSHL--T 61

Query: 61  PPPPHSTVNGSLKKKP--AVDELKNKLKKFIATFRFSSIFSRIGSWRKNQIQV 112
           PPPP + +N SL+KKP   VDELKNKLKKF +TFRFSSI +R G WRK Q QV
Sbjct: 62  PPPPSAVINASLEKKPPAVVDELKNKLKKFKSTFRFSSISNRFGLWRKKQFQV 112

[Close]

BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A5A7U611 (Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001280 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.2e-38
Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 6   IWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPPPH 65
           +WDCGSPLYDSYELASLAHLIDRNL+AFPPP+H GSRR  SNKVSHFHFS  IP PPP  
Sbjct: 7   VWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIPPPPP-- 66

Query: 66  STVNGSLKKK-PAVDEL-KNKLKKFIATFRFSSIFSRIGSWRKNQIQV 112
           S VNGS KKK PAVDEL KNK+KK  +TFRFSSI S  G WRK QIQV
Sbjct: 67  SAVNGSFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A5D3D3M1 (Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005310 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 5.2e-38
Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 6   IWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPPPH 65
           +WDCGSPLYDSYELASLAHLIDRNL+AFPPP+H GSRR  SNKVSHFHFS  IP PPP  
Sbjct: 7   VWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIPPPPP-- 66

Query: 66  STVNGSLKKK-PAVDEL-KNKLKKFIATFRFSSIFSRIGSWRKNQIQV 112
           S VNGS KKK PAVDEL KNK+KK  +TFRFSSI S  G WRK QIQV
Sbjct: 67  SAVNGSFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A2P6SIA6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0358991 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12
Identity = 51/121 (42.15%), Postives = 61/121 (50.41%), Query Frame = 0


Query: 4   LGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPP 63
           L IWDCGSPLYDSYELAS++HLI+R+LMAFP    GGS + F  K SH   S    +   
Sbjct: 15  LAIWDCGSPLYDSYELASVSHLIERHLMAFPS--LGGSSKRFIAKFSHSSSSKTTSTTST 74

Query: 64  PHSTVNGS----------------LKKKPAVDELKNKLKKFIATFRFSSIFSRIGSWRKN 109
                 GS                 K+K      K K KK + T  FS  +SR G WRK 
Sbjct: 75  TMKEAKGSDSMEENLSKILGIKKMWKRKGLFGATKEKTKK-MKTTGFSGFYSRFGLWRKK 132

[Close]

BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A498KNX4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011859 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 5.4e-11
Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 0


Query: 3   ELGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSH--FHFSDLIPS 62
           ELG+WDCGSPLYDSYEL S++HLI+R+LMA P    GGSRRF +N  +H     +  + S
Sbjct: 10  ELGVWDCGSPLYDSYELVSVSHLIERHLMALPYSL-GGSRRFIANFCTHPSSGMASTVSS 69

Query: 63  PPPPHST------------VNGSLKKKPAVDELKNKLKKFIATFRFSSIFSRIGSWRK 107
                +T            +    K+K    E K+K KK     RFS   + IG WR+
Sbjct: 70  DMRSSTTREAKGSSSSNVGIRKIWKRKVFFGEGKDKAKK--RKLRFSVFCNMIGLWRQ 124

[Close]

BLAST of HG10013156 vs. TAIR 10
Match: AT3G61660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46375.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 5.6e-08
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0


Query: 6  IWDCGSPLYDSYELASLAHLIDRNLMAFP 35
          +WDCGSPLYDSYEL SL H+I+R+ M+ P
Sbjct: 9  LWDCGSPLYDSYELVSLTHIIERHFMSLP 37

[Close]

BLAST of HG10013156 vs. TAIR 10
Match: AT2G46375.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61660.1); Has 12 Blast hits to 12 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07
Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 0


Query: 2  RELGIWDCGSPLYDSYELASLAHLIDRNLMAFPP 36
          R+  IWDC S LYDSYEL S  H+I+R LM F P
Sbjct: 19 RDPKIWDCDSTLYDSYELVSFVHIIERKLMPFSP 52

[Close]

BLAST of HG10013156 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.2e-04
Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0


Query: 6   IWDCGSPLYDSYELASLAHLIDRNLMAFP----PPFHGGSRRFFSNKVSHFHFSDLIPSP 65
           +WDCGS LYDS+EL S    +D  + A         H   RR  S       +S   P P
Sbjct: 122 VWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSHLPDRRIPSLSSLSPEYSP--PLP 181

Query: 66  PPPHSTVNGSLKKKPAVDELKNKLKKFI 90
           PPP ++ + S   K   +++   L++F+
Sbjct: 182 PPPTTSSSSSSGGKKHSNKISRSLQRFL 207

[Close]

BLAST of HG10013156 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 2.2e-04
Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0


Query: 6   IWDCGSPLYDSYELASLAHLIDRNLMAFP----PPFHGGSRRFFSNKVSHFHFSDLIPSP 65
           +WDCGS LYDS+EL S    +D  + A         H   RR  S       +S   P P
Sbjct: 113 VWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSHLPDRRIPSLSSLSPEYSP--PLP 172

Query: 66  PPPHSTVNGSLKKKPAVDELKNKLKKFI 90
           PPP ++ + S   K   +++   L++F+
Sbjct: 173 PPPTTSSSSSSGGKKHSNKISRSLQRFL 198

The following BLAST results are available for this feature:

BLAST of HG10013156 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650237.1	1.0e-40	75.22	hypothetical protein Csa_011169 [Cucumis sativus]	[more]
TYK17659.1	1.1e-37	77.78	glycosyltransferase family 28 protein [Cucumis melo var. makuwa]	[more]
KAA0048909.1	1.1e-37	77.78	glycosyltransferase family 28 protein [Cucumis melo var. makuwa]	[more]
KAG6597095.1	1.3e-27	73.91	Protein ENHANCED DISEASE RESISTANCE 4, partial [Cucurbita argyrosperma subsp. so...	[more]
PRQ58407.1	7.8e-12	42.15	hypothetical protein RchiOBHm_Chr1g0358991 [Rosa chinensis]	[more]

BLAST of HG10013156 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10013156 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L377	5.0e-41	75.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119750 PE=4 SV=1	[more]
A0A5A7U611	5.2e-38	77.78	Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3D3M1	5.2e-38	77.78	Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A2P6SIA6	3.8e-12	42.15	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0358991 PE=4...	[more]
A0A498KNX4	5.4e-11	41.53	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011859 PE=4 SV=1	[more]

BLAST of HG10013156 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61660.1	5.6e-08	68.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46375.1	3.6e-07	61.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41810.1	2.2e-04	31.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41810.2	2.2e-04	31.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33978	SERINE/THREONINE-KINASE	coord: 1..107
None	No IPR available	PANTHER	PTHR33978:SF14	SUBFAMILY NOT NAMED	coord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10013156.1	HG10013156.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016740	transferase activity