HG10013156 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGAATTGGGTATATGGGATTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTTCCGCCGCCCTTCCACGGCGGATCACGGAGGTTCTTCTCCAACAAAGTCTCCCACTTCCACTTTTCTGATCTCATTCCATCGCCACCCCCGCCGCACTCCACCGTGAATGGGTCCTTAAAAAAAAAGCCGGCGGTGGACGAATTGAAGAACAAGCTCAAGAAATTCATAGCCACGTTCAGGTTTTCTTCAATTTTTAGTAGAATCGGCTCTTGGAGGAAGAACCAAATCCAAGTATGA ATGAGAGAATTGGGTATATGGGATTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTTCCGCCGCCCTTCCACGGCGGATCACGGAGGTTCTTCTCCAACAAAGTCTCCCACTTCCACTTTTCTGATCTCATTCCATCGCCACCCCCGCCGCACTCCACCGTGAATGGGTCCTTAAAAAAAAAGCCGGCGGTGGACGAATTGAAGAACAAGCTCAAGAAATTCATAGCCACGTTCAGGTTTTCTTCAATTTTTAGTAGAATCGGCTCTTGGAGGAAGAACCAAATCCAAGTATGA ATGAGAGAATTGGGTATATGGGATTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTTCCGCCGCCCTTCCACGGCGGATCACGGAGGTTCTTCTCCAACAAAGTCTCCCACTTCCACTTTTCTGATCTCATTCCATCGCCACCCCCGCCGCACTCCACCGTGAATGGGTCCTTAAAAAAAAAGCCGGCGGTGGACGAATTGAAGAACAAGCTCAAGAAATTCATAGCCACGTTCAGGTTTTCTTCAATTTTTAGTAGAATCGGCTCTTGGAGGAAGAACCAAATCCAAGTATGA MRELGIWDCGSPLYDSYELASLAHLIDRNLMAFPPPFHGGSRRFFSNKVSHFHFSDLIPSPPPPHSTVNGSLKKKPAVDELKNKLKKFIATFRFSSIFSRIGSWRKNQIQV Homology
BLAST of HG10013156 vs. NCBI nr
Match: KAE8650237.1 (hypothetical protein Csa_011169 [Cucumis sativus]) HSP 1 Score: 176.8 bits (447), Expect = 1.0e-40 Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 0
BLAST of HG10013156 vs. NCBI nr
Match: TYK17659.1 (glycosyltransferase family 28 protein [Cucumis melo var. makuwa]) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37 Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of HG10013156 vs. NCBI nr
Match: KAA0048909.1 (glycosyltransferase family 28 protein [Cucumis melo var. makuwa]) HSP 1 Score: 166.8 bits (421), Expect = 1.1e-37 Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of HG10013156 vs. NCBI nr
Match: KAG6597095.1 (Protein ENHANCED DISEASE RESISTANCE 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27 Identity = 68/92 (73.91%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of HG10013156 vs. NCBI nr
Match: PRQ58407.1 (hypothetical protein RchiOBHm_Chr1g0358991 [Rosa chinensis]) HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12 Identity = 51/121 (42.15%), Postives = 61/121 (50.41%), Query Frame = 0
BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A0A0L377 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119750 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 5.0e-41 Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 0
BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A5A7U611 (Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001280 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 5.2e-38 Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A5D3D3M1 (Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005310 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 5.2e-38 Identity = 84/108 (77.78%), Postives = 89/108 (82.41%), Query Frame = 0
BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A2P6SIA6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0358991 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12 Identity = 51/121 (42.15%), Postives = 61/121 (50.41%), Query Frame = 0
BLAST of HG10013156 vs. ExPASy TrEMBL
Match: A0A498KNX4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011859 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 5.4e-11 Identity = 49/118 (41.53%), Postives = 64/118 (54.24%), Query Frame = 0
BLAST of HG10013156 vs. TAIR 10
Match: AT3G61660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46375.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 5.6e-08 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of HG10013156 vs. TAIR 10
Match: AT2G46375.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61660.1); Has 12 Blast hits to 12 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-07 Identity = 21/34 (61.76%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of HG10013156 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.2e-04 Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0
BLAST of HG10013156 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 2.2e-04 Identity = 28/88 (31.82%), Postives = 42/88 (47.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|