HG10012533 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10012533
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ethylene-responsive transcription factor ERF071-like
Location	Chr01: 22195067 .. 22196471 (-)
RNA-Seq Expression	HG10012533
Synteny	HG10012533

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCGGCGGAGCTATCATCTCCGATTACGTCGAGCCAAACCCCGTCGTCGTCGACAACCTCCTCTGGCCTGATCTCGACACCACCTTCACCGACCTCCTCGGCCTCGACTTCTCGACCCAAAACTACCCCTTCAACAACACTCCCTCCAATGTTGTAGAGACCTCCAAACAACTCTCTCAAGGTACACTAACTCCCTCTCTACTTTCTCTCTACTTTCTAAAATTTATGTGTTTCTTTTGATTCCAACCTCTGATTTGGAGTAATAGCTCACTTTAACATGTTTCTTTAATTTTAACTATCGTAGAAGAACTCAAAAGCTTGTGATACATAAATATTATAGGAATTTAAACTTAAAAAAAAAAAAAAAAAATTATCTTAATTGTTGATTAGCTATATACTTATGTTACTATGTCGTACTCATGAATTTGAAATTTTGTAGAAGGTCTAACAAATAGAAATAAAAAAATAATTAAAGAAAAAATGACATAAATGACTTTCTACTATGTTAAATCAATAATGAATTGAGAATCATAAGTAGATGGGTGATAATAAATTTAATTATATCATTACACTTTAGTGCAATAAGAAGTGACTAGGTCACATTTGTTAACCATTTTGTTTTTTGTTTTTGGGTTTTTTACAATTAAACATATTTCCTCTCAACTTTTTATAGTGATTTGATCTTTAGGTAGAAGGGTTGAATTCTTAGTTAAATTTCAAAAATAAAAATAAAATTTTAAAATCTACTATTTTTAATTTTTAAAATTTGGCTTGGTTTTTTTAAAATACGGTAAAAAGTAAGTAAAAGAAAAAGAAATTTAGAAGTGGAAGAGTGTTTATATAGAGTTAATTTTTAAAAAACTAAAAACAAAAAACTAAATTTCATGTTTTTGTAATGAGAAACGCTAAACTACTAATTGGGTATTATCATTGCTAATGTTTAGTGAAAAGTGAGAAGGTGGAAGGGAATGAAGCAGCAACAAGTGAGATGAAGAAGCCTCAAAAGGTTCGAAAAAGCAAATACAGAGGGATTAGGCAGCGCCCATGGGGAAAATGGGCCGCCGAGATTCGAGACCCACAAAAGGGCCTACGTGTTTGGCTTGGTACCTACAACACTGCCGAAGAAGCAGCCAGAGCCTATGACCAAGCCGCCATAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCGCTCATCCCCCGCCGCCGCCGCCGCTACAGTCACCACCACAACCACAACTCCCGACCACCTCCACCCCCAACTTCGACATCGAACTCAAAGACCAAATCTCAACCTTGGAATCATTCCTCGGTCTCGACCCCTCACCGCCGGTCGAACCGACGGCCGACCTCTGGTGGGCCGATGACCTTTTCACATATCAACAACAAAATCTCCAACTCTAA

mRNA sequence

ATGTGCGGCGGAGCTATCATCTCCGATTACGTCGAGCCAAACCCCGTCGTCGTCGACAACCTCCTCTGGCCTGATCTCGACACCACCTTCACCGACCTCCTCGGCCTCGACTTCTCGACCCAAAACTACCCCTTCAACAACACTCCCTCCAATGTTGTAGAGACCTCCAAACAACTCTCTCAAGTGAAAAGTGAGAAGGTGGAAGGGAATGAAGCAGCAACAAGTGAGATGAAGAAGCCTCAAAAGGTTCGAAAAAGCAAATACAGAGGGATTAGGCAGCGCCCATGGGGAAAATGGGCCGCCGAGATTCGAGACCCACAAAAGGGCCTACGTGTTTGGCTTGGTACCTACAACACTGCCGAAGAAGCAGCCAGAGCCTATGACCAAGCCGCCATAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCGCTCATCCCCCGCCGCCGCCGCCGCTACAGTCACCACCACAACCACAACTCCCGACCACCTCCACCCCCAACTTCGACATCGAACTCAAAGACCAAATCTCAACCTTGGAATCATTCCTCGGTCTCGACCCCTCACCGCCGGTCGAACCGACGGCCGACCTCTGGTGGGCCGATGACCTTTTCACATATCAACAACAAAATCTCCAACTCTAA

Coding sequence (CDS)

ATGTGCGGCGGAGCTATCATCTCCGATTACGTCGAGCCAAACCCCGTCGTCGTCGACAACCTCCTCTGGCCTGATCTCGACACCACCTTCACCGACCTCCTCGGCCTCGACTTCTCGACCCAAAACTACCCCTTCAACAACACTCCCTCCAATGTTGTAGAGACCTCCAAACAACTCTCTCAAGTGAAAAGTGAGAAGGTGGAAGGGAATGAAGCAGCAACAAGTGAGATGAAGAAGCCTCAAAAGGTTCGAAAAAGCAAATACAGAGGGATTAGGCAGCGCCCATGGGGAAAATGGGCCGCCGAGATTCGAGACCCACAAAAGGGCCTACGTGTTTGGCTTGGTACCTACAACACTGCCGAAGAAGCAGCCAGAGCCTATGACCAAGCCGCCATAAGAATCAGAGGCAAAAAGGCCAAACTCAACTTCGCTCATCCCCCGCCGCCGCCGCCGCTACAGTCACCACCACAACCACAACTCCCGACCACCTCCACCCCCAACTTCGACATCGAACTCAAAGACCAAATCTCAACCTTGGAATCATTCCTCGGTCTCGACCCCTCACCGCCGGTCGAACCGACGGCCGACCTCTGGTGGGCCGATGACCTTTTCACATATCAACAACAAAATCTCCAACTCTAA

Protein sequence

MCGGAIISDYVEPNPVVVDNLLWPDLDTTFTDLLGLDFSTQNYPFNNTPSNVVETSKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPPPLQSPPQPQLPTTSTPNFDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL

Homology

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BLAST of HG10012533 vs. NCBI nr
Match: XP_038906638.1 (ethylene-responsive transcription factor RAP2-3 [Benincasa hispida])

HSP 1 Score: 357.5 bits (916), Expect = 8.3e-95
Identity = 186/215 (86.51%), Postives = 193/215 (89.77%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFTDLLGLDFSTQNYPFNNTPSNVV-ETSKQL 60
           MCGGAIISDYVEPNPVVVDNLLWP+LDTTF+DLLGLD S QNYPFNNTPSNVV ET KQL
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPNLDTTFSDLLGLDLSGQNYPFNNTPSNVVAETPKQL 60

Query: 61  SQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNT 120
           SQVKSEKVEGNEA   + KKPQK+RKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGT+NT
Sbjct: 61  SQVKSEKVEGNEAVGGK-KKPQKIRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTFNT 120

Query: 121 AEEAARAYDQAAIRIRGKKAKLNFAHPPPPP--PLQSP--PQPQLPTTSTPNFDIELKDQ 180
           AEEAARAYDQAAIRIRGKKAK NF HPP P   PL  P  PQ QLPTTS+P+FDIELKDQ
Sbjct: 121 AEEAARAYDQAAIRIRGKKAKTNFTHPPSPTSLPLLPPSLPQQQLPTTSSPSFDIELKDQ 180

Query: 181 ISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQN 211
           ISTLESFLGLDPSP VEP ADLWW DDLFTYQQQN
Sbjct: 181 ISTLESFLGLDPSPLVEPMADLWWVDDLFTYQQQN 214

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BLAST of HG10012533 vs. NCBI nr
Match: KAA0049520.1 (ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 355.1 bits (910), Expect = 4.1e-94
Identity = 192/228 (84.21%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FTDLLGLDFS-TQNYPFNNT--PSNVVET- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT F+DLLGLD S TQNY FNNT   +NVV   
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  SKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQVK EKVEGNE ATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPP----PLQSPP------QPQLPTTST 180
           TYNTAEEAARAYDQAAIRIRGKKAKLNF HPPPPP    PL  PP      Q QLPTTS 
Sbjct: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSA 180

Query: 181 PNFDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
             FD+ELK QISTLESFLGLDPSPPVEPTADLWW DDL TYQQQNLQL
Sbjct: 181 TPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

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BLAST of HG10012533 vs. NCBI nr
Match: XP_008438910.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo])

HSP 1 Score: 354.0 bits (907), Expect = 9.1e-94
Identity = 191/228 (83.77%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FTDLLGLDFS-TQNYPFNNT--PSNVVET- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT F+DLLGLD S TQNY FNNT   +NVV   
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  SKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQVK E+VEGNE ATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG
Sbjct: 61  PKQLSQVKKERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPP----PLQSPP------QPQLPTTST 180
           TYNTAEEAARAYDQAAIRIRGKKAKLNF HPPPPP    PL  PP      Q QLPTTS 
Sbjct: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSA 180

Query: 181 PNFDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
             FD+ELK QISTLESFLGLDPSPPVEPTADLWW DDL TYQQQNLQL
Sbjct: 181 TPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]

BLAST of HG10012533 vs. NCBI nr
Match: XP_008438911.1 (PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 3.2e-91
Identity = 189/228 (82.89%), Postives = 193/228 (84.65%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FTDLLGLDFS-TQNYPFNNT--PSNVVET- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT F+DLLGLD S TQNY FNNT   +NVV   
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  SKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQ   E+VEGNE ATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG
Sbjct: 61  PKQLSQ---ERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPP----PLQSPP------QPQLPTTST 180
           TYNTAEEAARAYDQAAIRIRGKKAKLNF HPPPPP    PL  PP      Q QLPTTS 
Sbjct: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSA 180

Query: 181 PNFDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
             FD+ELK QISTLESFLGLDPSPPVEPTADLWW DDL TYQQQNLQL
Sbjct: 181 TPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 225

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BLAST of HG10012533 vs. NCBI nr
Match: XP_004134228.1 (ethylene-responsive transcription factor RAP2-3 [Cucumis sativus] >KGN57139.1 hypothetical protein Csa_010229 [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 3.2e-91
Identity = 185/226 (81.86%), Postives = 190/226 (84.07%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFTDLLGLDF--STQNYPFNNTPS-NVVETS- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTTF+DLLGLD    TQNYPFNNT S NVV+ + 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 61  -KQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQVK EKVEGNE    EMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP+KGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPPPL--------QSPPQPQLPTTSTPN 180
           TYNT EEAARAYDQAAIRIRGKKAKLNF  P P PPL         SPPQ QLPTTSTP 
Sbjct: 121 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTP- 180

Query: 181 FDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
            D+ELK QISTLESFLGLDPSPPVEPTADLWW DDL   QQQNLQL
Sbjct: 181 IDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

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BLAST of HG10012533 vs. ExPASy Swiss-Prot
Match: P42736 (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 GN=RAP2-3 PE=1 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-32
Identity = 110/260 (42.31%), Postives = 132/260 (50.77%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVD--------NLLWPDLDTTFTDLLGLDFSTQNYPFNNTPSNV 60
           MCGGAIISDY    P+V            LW +LD +  D     +ST        P+N 
Sbjct: 1   MCGGAIISDYA---PLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKL----HPTNQ 60

Query: 61  VETSKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRV 120
           V        VK E V+  E AT   K+  + RK+ YRGIR+RPWGKWAAEIRDP+KG+RV
Sbjct: 61  V-------NVKEEAVK-KEQATEPGKR--RKRKNVYRGIRKRPWGKWAAEIRDPRKGVRV 120

Query: 121 WLGTYNTAEEAARAYDQAAIRIRGKKAKLNFA---HPPPP---PPLQSPPQPQLPTT--- 180
           WLGT+NTAEEAA AYD AA +IRG KAKLNF    HPPPP   PP  SP     P     
Sbjct: 121 WLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKV 180

Query: 181 ----------STPNF----------------------DIELKDQISTLESFLGLDPSPPV 204
                     S P+F                      D +LK QIS+LESFL LD +   
Sbjct: 181 CVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAE 240

[Close]

BLAST of HG10012533 vs. ExPASy Swiss-Prot
Match: Q9SSA8 (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702 GN=RAP2-12 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.5e-26
Identity = 78/183 (42.62%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 1   MCGGAIISDYVEP--NPVVVDNLLWPDL--------------------DTTF-TDLLGL- 60
           MCGGAIISD++ P  +  V    +WPDL                    D  F  D  G  
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  ---------DF-------STQNYPFNNTPSNVVETSKQLSQVKSEKVEGNEAATSEMKKP 120
                    DF         + + F +TP   V  + +   V  +KV G +      K  
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAE-GSVFGKKVTGLDGDAE--KSA 120

Query: 121 QKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 144
            + RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA RIRG KAK
Sbjct: 121 NRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAK 180

[Close]

BLAST of HG10012533 vs. ExPASy Swiss-Prot
Match: O22259 (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 GN=ERF071 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23
Identity = 82/213 (38.50%), Postives = 104/213 (48.83%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFTDLLGLDFSTQNYPFNNTPSNVVETSKQLS 60
           MCGGAIISD++           W                          S       QL 
Sbjct: 1   MCGGAIISDFI-----------W--------------------------SKSESEPSQLG 60

Query: 61  QVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTA 120
            V S K +    + SE +  ++ RK+ YRGIRQRPWGKWAAEIRDP KG+RVWLGT+ TA
Sbjct: 61  SVSSRK-KRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTA 120

Query: 121 EEAARAYDQAAIRIRGKKAKLNFAHPPPPPPLQSPPQPQLPTTSTPNFDIELKDQISTLE 180
           +EAARAYD AAI+IRG+KAKLNF +        + P        + N    L + +  LE
Sbjct: 121 DEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSEDLMALE 171

Query: 181 SFLGLDPSPPVEPTADLWWADD---LFTYQQQN 211
            ++         P AD   A D   L++YQ  N
Sbjct: 181 DYMRFYQI----PVADDQSATDIGNLWSYQDSN 171

[Close]

BLAST of HG10012533 vs. ExPASy Swiss-Prot
Match: Q8H0T5 (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=1 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23
Identity = 66/145 (45.52%), Postives = 86/145 (59.31%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDN--LLWPDLDTTFTDLLGLDFSTQNYPFNNTPSNVVETSKQ 60
           MCGGA+ISDY+ P  +   +    W              F    Y F+    + +E+ + 
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGV---------FDCSIYDFDGN-FDELESDEP 60

Query: 61  LSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYN 120
                + K   + +A+   KK    + S+Y+GIR+RPWG+WAAEIRDP KG+RVWLGT+N
Sbjct: 61  FVFSSTHKHHASGSASDGKKK----QSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFN 120

Query: 121 TAEEAARAYDQAAIRIRGKKAKLNF 144
           TAEEAARAYD  A RIRG KAKLNF
Sbjct: 121 TAEEAARAYDLEAKRIRGAKAKLNF 131

[Close]

BLAST of HG10012533 vs. ExPASy Swiss-Prot
Match: Q70II3 (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-23
Identity = 54/90 (60.00%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 71  EAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQA 130
           E+ +    +  + +K +YRG+RQRPWGKWAAEIRDP +  RVWLGT++TAE AARAYD+A
Sbjct: 60  ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEA 119

Query: 131 AIRIRGKKAKLNFAH-----PPPPPPLQSP 156
           A+R RG KAKLNF       PPPPP L+SP
Sbjct: 120 ALRFRGNKAKLNFPEDVRILPPPPPLLRSP 149

[Close]

BLAST of HG10012533 vs. ExPASy TrEMBL
Match: A0A5A7U2G6 (Ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G007740 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.0e-94
Identity = 192/228 (84.21%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FTDLLGLDFS-TQNYPFNNT--PSNVVET- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT F+DLLGLD S TQNY FNNT   +NVV   
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  SKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQVK EKVEGNE ATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPP----PLQSPP------QPQLPTTST 180
           TYNTAEEAARAYDQAAIRIRGKKAKLNF HPPPPP    PL  PP      Q QLPTTS 
Sbjct: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSA 180

Query: 181 PNFDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
             FD+ELK QISTLESFLGLDPSPPVEPTADLWW DDL TYQQQNLQL
Sbjct: 181 TPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]

BLAST of HG10012533 vs. ExPASy TrEMBL
Match: A0A1S3AY54 (ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483869 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 4.4e-94
Identity = 191/228 (83.77%), Postives = 195/228 (85.53%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FTDLLGLDFS-TQNYPFNNT--PSNVVET- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT F+DLLGLD S TQNY FNNT   +NVV   
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  SKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQVK E+VEGNE ATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG
Sbjct: 61  PKQLSQVKKERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPP----PLQSPP------QPQLPTTST 180
           TYNTAEEAARAYDQAAIRIRGKKAKLNF HPPPPP    PL  PP      Q QLPTTS 
Sbjct: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSA 180

Query: 181 PNFDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
             FD+ELK QISTLESFLGLDPSPPVEPTADLWW DDL TYQQQNLQL
Sbjct: 181 TPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 228

[Close]

BLAST of HG10012533 vs. ExPASy TrEMBL
Match: A0A0A0L7Z6 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164580 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.6e-91
Identity = 185/226 (81.86%), Postives = 190/226 (84.07%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFTDLLGLDF--STQNYPFNNTPS-NVVETS- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTTF+DLLGLD    TQNYPFNNT S NVV+ + 
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTFSDLLGLDLITQTQNYPFNNTTSPNVVDNNI 60

Query: 61  -KQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQVK EKVEGNE    EMKKPQKVRKSKYRGIRQRPWGKWAAEIRDP+KGLRVWLG
Sbjct: 61  PKQLSQVKKEKVEGNEVGRGEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPRKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPPPL--------QSPPQPQLPTTSTPN 180
           TYNT EEAARAYDQAAIRIRGKKAKLNF  P P PPL         SPPQ QLPTTSTP 
Sbjct: 121 TYNTPEEAARAYDQAAIRIRGKKAKLNFPPPLPSPPLLSVPLSLPPSPPQQQLPTTSTP- 180

Query: 181 FDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
            D+ELK QISTLESFLGLDPSPPVEPTADLWW DDL   QQQNLQL
Sbjct: 181 IDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLACQQQNLQL 225

[Close]

BLAST of HG10012533 vs. ExPASy TrEMBL
Match: A0A1S3AY72 (ethylene-responsive transcription factor RAP2-3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483869 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.6e-91
Identity = 189/228 (82.89%), Postives = 193/228 (84.65%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTT-FTDLLGLDFS-TQNYPFNNT--PSNVVET- 60
           MCGGAIISDYVEPNPVVVDNLLWPDLDTT F+DLLGLD S TQNY FNNT   +NVV   
Sbjct: 1   MCGGAIISDYVEPNPVVVDNLLWPDLDTTLFSDLLGLDLSGTQNYLFNNTTPSANVVHNI 60

Query: 61  SKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120
            KQLSQ   E+VEGNE ATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG
Sbjct: 61  PKQLSQ---ERVEGNEGATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLG 120

Query: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPP----PLQSPP------QPQLPTTST 180
           TYNTAEEAARAYDQAAIRIRGKKAKLNF HPPPPP    PL  PP      Q QLPTTS 
Sbjct: 121 TYNTAEEAARAYDQAAIRIRGKKAKLNFPHPPPPPSLPLPLPLPPSLPQQQQQQLPTTSA 180

Query: 181 PNFDIELKDQISTLESFLGLDPSPPVEPTADLWWADDLFTYQQQNLQL 214
             FD+ELK QISTLESFLGLDPSPPVEPTADLWW DDL TYQQQNLQL
Sbjct: 181 TPFDVELKHQISTLESFLGLDPSPPVEPTADLWWVDDLLTYQQQNLQL 225

[Close]

BLAST of HG10012533 vs. ExPASy TrEMBL
Match: A0A6J1C807 (ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3673 GN=LOC111009221 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 4.0e-63
Identity = 149/229 (65.07%), Postives = 163/229 (71.18%), Query Frame = 0


Query: 1   MCGGAIISDYVE----PNPVVVDNLLWPDLDTTFTDLLGLDFSTQNYPFNNTPSNVVETS 60
           MCGGAIISD+V+     +PVV DN LWP+ D TF++LLGLD ST NY FNN+P+N     
Sbjct: 1   MCGGAIISDFVDTTCHQSPVVDDN-LWPEFD-TFSELLGLDASTGNYLFNNSPTN--NNL 60

Query: 61  KQLSQVKSEKVEG--------NEAATSEMKK---PQKVRKSKYRGIRQRPWGKWAAEIRD 120
           +Q S VKSEK E          EA   EMKK    Q+VRKSKYRGIRQRPWGKWAAEIRD
Sbjct: 61  QQHSHVKSEKKEECEEAGGEVAEAVAEEMKKRPQKQRVRKSKYRGIRQRPWGKWAAEIRD 120

Query: 121 PQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNFAHPPPPPPLQSPPQPQLPTTST 180
           PQKGLRVWLGT+NTAEEAA AYDQAAIRIRGKKAKLNF HPPP P    PP P +     
Sbjct: 121 PQKGLRVWLGTFNTAEEAAAAYDQAAIRIRGKKAKLNFTHPPPSP----PPPPAV----- 180

Query: 181 PNFDIELKDQISTLESFLGLDPS-PPVEPTADLWWADDLFTYQQQNLQL 214
                    Q+S+LESFLGLDPS PPVEP ADLWWADDL TY  QNL L
Sbjct: 181 ---------QLSSLESFLGLDPSPPPVEPMADLWWADDLLTYHHQNLPL 207

[Close]

BLAST of HG10012533 vs. TAIR 10
Match: AT3G16770.1 (ethylene-responsive element binding protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-33
Identity = 110/260 (42.31%), Postives = 132/260 (50.77%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPVVVD--------NLLWPDLDTTFTDLLGLDFSTQNYPFNNTPSNV 60
           MCGGAIISDY    P+V            LW +LD +  D     +ST        P+N 
Sbjct: 1   MCGGAIISDYA---PLVTKAKGRKLTAEELWSELDASAADDFWGFYSTSKL----HPTNQ 60

Query: 61  VETSKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRV 120
           V        VK E V+  E AT   K+  + RK+ YRGIR+RPWGKWAAEIRDP+KG+RV
Sbjct: 61  V-------NVKEEAVK-KEQATEPGKR--RKRKNVYRGIRKRPWGKWAAEIRDPRKGVRV 120

Query: 121 WLGTYNTAEEAARAYDQAAIRIRGKKAKLNFA---HPPPP---PPLQSPPQPQLPTT--- 180
           WLGT+NTAEEAA AYD AA +IRG KAKLNF    HPPPP   PP  SP     P     
Sbjct: 121 WLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKV 180

Query: 181 ----------STPNF----------------------DIELKDQISTLESFLGLDPSPPV 204
                     S P+F                      D +LK QIS+LESFL LD +   
Sbjct: 181 CVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLESFLELDGNTAE 240

[Close]

BLAST of HG10012533 vs. TAIR 10
Match: AT1G53910.3 (related to AP2 12 )

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-27
Identity = 78/183 (42.62%), Postives = 98/183 (53.55%), Query Frame = 0


Query: 1   MCGGAIISDYVEP--NPVVVDNLLWPDL--------------------DTTF-TDLLGL- 60
           MCGGAIISD++ P  +  V    +WPDL                    D  F  D  G  
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  ---------DF-------STQNYPFNNTPSNVVETSKQLSQVKSEKVEGNEAATSEMKKP 120
                    DF         + + F +TP   V  +   ++V  +KV G +      K  
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAA---AEVFGKKVTGLDGDAE--KSA 120

Query: 121 QKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 144
            + RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA RIRG KAK
Sbjct: 121 NRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAK 178

[Close]

BLAST of HG10012533 vs. TAIR 10
Match: AT1G53910.1 (related to AP2 12 )

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-27
Identity = 78/183 (42.62%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 1   MCGGAIISDYVEP--NPVVVDNLLWPDL--------------------DTTF-TDLLGL- 60
           MCGGAIISD++ P  +  V    +WPDL                    D  F  D  G  
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  ---------DF-------STQNYPFNNTPSNVVETSKQLSQVKSEKVEGNEAATSEMKKP 120
                    DF         + + F +TP   V  + +   V  +KV G +      K  
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAE-GSVFGKKVTGLDGDAE--KSA 120

Query: 121 QKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 144
            + RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA RIRG KAK
Sbjct: 121 NRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAK 180

[Close]

BLAST of HG10012533 vs. TAIR 10
Match: AT1G53910.2 (related to AP2 12 )

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-27
Identity = 78/183 (42.62%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 1   MCGGAIISDYVEP--NPVVVDNLLWPDL--------------------DTTF-TDLLGL- 60
           MCGGAIISD++ P  +  V    +WPDL                    D  F  D  G  
Sbjct: 1   MCGGAIISDFIPPPRSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFK 60

Query: 61  ---------DF-------STQNYPFNNTPSNVVETSKQLSQVKSEKVEGNEAATSEMKKP 120
                    DF         + + F +TP   V  + +   V  +KV G +      K  
Sbjct: 61  DDSSIDCDDDFDVGDVFADVKPFVFTSTPKPAVSAAAE-GSVFGKKVTGLDGDAE--KSA 120

Query: 121 QKVRKSKYRGIRQRPWGKWAAEIRDPQKGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAK 144
            + RK++YRGIRQRPWGKWAAEIRDP++G R+WLGT+ TAEEAARAYD AA RIRG KAK
Sbjct: 121 NRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAK 180

[Close]

BLAST of HG10012533 vs. TAIR 10
Match: AT1G72360.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-25
Identity = 71/156 (45.51%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MCGGAIISDYVEPNPV-------------VVDNLLWPDLDTTFTDLLGLDFSTQNYPFNN 60
           MCGGA+ISDY+ P  +             V D  ++ D D  F +L     S + + F++
Sbjct: 1   MCGGAVISDYIAPEKIARSSGKSSWRSNGVFDCSIY-DFDGNFDEL----ESDEPFVFSS 60

Query: 61  TPSNVVETSKQLSQVKSEKVEGNEAATSEMKKPQKVRKSKYRGIRQRPWGKWAAEIRDPQ 120
           T                     + A+ S+ KK Q    S+Y+GIR+RPWG+WAAEIRDP 
Sbjct: 61  T-------------------HKHHASASDGKKKQ---SSRYKGIRRRPWGRWAAEIRDPI 120

Query: 121 KGLRVWLGTYNTAEEAARAYDQAAIRIRGKKAKLNF 144
           KG+RVWLGT+NTAEEAARAYD  A RIRG KAKLNF
Sbjct: 121 KGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNF 129

The following BLAST results are available for this feature:

BLAST of HG10012533 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906638.1	8.3e-95	86.51	ethylene-responsive transcription factor RAP2-3 [Benincasa hispida]	[more]
KAA0049520.1	4.1e-94	84.21	ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis melo var. ma...	[more]
XP_008438910.1	9.1e-94	83.77	PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1 [Cucumis m...	[more]
XP_008438911.1	3.2e-91	82.89	PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X2 [Cucumis m...	[more]
XP_004134228.1	3.2e-91	81.86	ethylene-responsive transcription factor RAP2-3 [Cucumis sativus] >KGN57139.1 hy...	[more]

BLAST of HG10012533 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42736	3.5e-32	42.31	Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SSA8	8.5e-26	42.62	Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana OX=3702...	[more]
O22259	1.8e-23	38.50	Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8H0T5	1.8e-23	45.52	Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q70II3	3.0e-23	60.00	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of HG10012533 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2G6	2.0e-94	84.21	Ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo var. ...	[more]
A0A1S3AY54	4.4e-94	83.77	ethylene-responsive transcription factor RAP2-3 isoform X1 OS=Cucumis melo OX=36...	[more]
A0A0A0L7Z6	1.6e-91	81.86	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G164580 PE=...	[more]
A0A1S3AY72	1.6e-91	82.89	ethylene-responsive transcription factor RAP2-3 isoform X2 OS=Cucumis melo OX=36...	[more]
A0A6J1C807	4.0e-63	65.07	ethylene-responsive transcription factor RAP2-3-like OS=Momordica charantia OX=3...	[more]

BLAST of HG10012533 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16770.1	2.5e-33	42.31	ethylene-responsive element binding protein	[more]
AT1G53910.3	4.6e-27	42.62	related to AP2 12	[more]
AT1G53910.1	6.0e-27	42.62	related to AP2 12	[more]
AT1G53910.2	6.0e-27	42.62	related to AP2 12	[more]
AT1G72360.3	1.9e-25	45.51	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 88..99 score: 70.45 coord: 110..126 score: 68.88
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 87..150 e-value: 8.0E-39 score: 145.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 86..136 e-value: 2.3E-15 score: 56.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 87..144 score: 24.434111
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 86..145 e-value: 8.91118E-37 score: 121.225
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 86..145 e-value: 1.9E-27 score: 97.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..167
None	No IPR available	PANTHER	PTHR31190:SF210	EREBP TRANSCRIPTION FACTOR	coord: 1..157
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 1..157
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 86..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10012533.1	HG10012533.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity