HG10012401 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGATCAGCGATCCGGTTGATCAAAGACAGAGCATTACTAGTCAACTGCCCAATGTTAACAATCCTAGTCCTAACTGCGGCCTTAACGCCGCCGTTCACCGCCTTCCCCTGAAACCCTTCGCTACAAGTAGTCTCATCGGTGAGGGCGGCGCTGACCCAAGTTTGAACATTGCTCATAACGAGATCAAAATCGCGGCCACGACGGAGCTTCGGCATCTCGGAAATGGAGGCGGCAAGGGAGTCAACAGAGTCACTCAGTTCTTCCAAACAGTCGTTAAGAGCAGAGACATCTCTGGAGGGGAGGCCGTGGGCGTGGGAAAGCTTGAGGATTTGGGTGGCGGCGGACTTGACGGAGGAGAGAGAGACGGAGAGGGCGGTGGTGGCCAAAAGGCGAGGGCTTGTTTGGATGGCATTAGCGTGGACTGA ATGCAGATCAGCGATCCGGTTGATCAAAGACAGAGCATTACTAGTCAACTGCCCAATGTTAACAATCCTAGTCCTAACTGCGGCCTTAACGCCGCCGTTCACCGCCTTCCCCTGAAACCCTTCGCTACAAGTAGTCTCATCGGTGAGGGCGGCGCTGACCCAAGTTTGAACATTGCTCATAACGAGATCAAAATCGCGGCCACGACGGAGCTTCGGCATCTCGGAAATGGAGGCGGCAAGGGAGTCAACAGAGTCACTCAGTTCTTCCAAACAGTCGTTAAGAGCAGAGACATCTCTGGAGGGGAGGCCGTGGGCGTGGGAAAGCTTGAGGATTTGGGTGGCGGCGGACTTGACGGAGGAGAGAGAGACGGAGAGGGCGGTGGTGGCCAAAAGGCGAGGGCTTGTTTGGATGGCATTAGCGTGGACTGA ATGCAGATCAGCGATCCGGTTGATCAAAGACAGAGCATTACTAGTCAACTGCCCAATGTTAACAATCCTAGTCCTAACTGCGGCCTTAACGCCGCCGTTCACCGCCTTCCCCTGAAACCCTTCGCTACAAGTAGTCTCATCGGTGAGGGCGGCGCTGACCCAAGTTTGAACATTGCTCATAACGAGATCAAAATCGCGGCCACGACGGAGCTTCGGCATCTCGGAAATGGAGGCGGCAAGGGAGTCAACAGAGTCACTCAGTTCTTCCAAACAGTCGTTAAGAGCAGAGACATCTCTGGAGGGGAGGCCGTGGGCGTGGGAAAGCTTGAGGATTTGGGTGGCGGCGGACTTGACGGAGGAGAGAGAGACGGAGAGGGCGGTGGTGGCCAAAAGGCGAGGGCTTGTTTGGATGGCATTAGCGTGGACTGA MQISDPVDQRQSITSQLPNVNNPSPNCGLNAAVHRLPLKPFATSSLIGEGGADPSLNIAHNEIKIAATTELRHLGNGGGKGVNRVTQFFQTVVKSRDISGGEAVGVGKLEDLGGGGLDGGERDGEGGGGQKARACLDGISVD Homology
BLAST of HG10012401 vs. NCBI nr
Match: KAA0067677.1 (hypothetical protein E6C27_scaffold70G00470 [Cucumis melo var. makuwa]) HSP 1 Score: 208.0 bits (528), Expect = 5.4e-50 Identity = 108/142 (76.06%), Postives = 122/142 (85.92%), Query Frame = 0
BLAST of HG10012401 vs. NCBI nr
Match: KAA0067676.1 (hypothetical protein E6C27_scaffold70G00450 [Cucumis melo var. makuwa] >TYK23680.1 hypothetical protein E5676_scaffold577G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 194.9 bits (494), Expect = 4.7e-46 Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 0
BLAST of HG10012401 vs. NCBI nr
Match: PON87359.1 (hypothetical protein TorRG33x02_168510 [Trema orientale]) HSP 1 Score: 55.1 bits (131), Expect = 5.8e-04 Identity = 48/142 (33.80%), Postives = 72/142 (50.70%), Query Frame = 0
BLAST of HG10012401 vs. ExPASy TrEMBL
Match: A0A5A7VKH2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold70G00470 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 2.6e-50 Identity = 108/142 (76.06%), Postives = 122/142 (85.92%), Query Frame = 0
BLAST of HG10012401 vs. ExPASy TrEMBL
Match: A0A0A0L9G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G176240 PE=4 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 7.9e-47 Identity = 104/142 (73.24%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of HG10012401 vs. ExPASy TrEMBL
Match: A0A5A7VMC4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00460 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.3e-46 Identity = 102/142 (71.83%), Postives = 117/142 (82.39%), Query Frame = 0
BLAST of HG10012401 vs. ExPASy TrEMBL
Match: A0A0A0L5L7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G175990 PE=4 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 3.0e-46 Identity = 102/142 (71.83%), Postives = 118/142 (83.10%), Query Frame = 0
BLAST of HG10012401 vs. ExPASy TrEMBL
Match: A0A2P5EPC4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_168510 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.8e-04 Identity = 48/142 (33.80%), Postives = 72/142 (50.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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