Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCACAATCTGAATCAAAGAGGATGGGTCAAGGAGAAGTTCGGGACGAAACCAGAGTGGATCTGCGGCAAAGCGGTTCCCTTCATACAGCTCGAATCATTCTCAGATGCCCCGAGAGGCATCCTTTCCTTGTTTGTTGGGTTGGTTCACGCGCGCGCAAACGAGCACCGGCCGCAACAGCAGGGAACTATGACCAATAGAGTCAGACACTTAGCTACATCCGCACGCAAAAGGAATGTGGTTCTGGTTGAGGCTTTCTTTCCTTTATTAGTAAAGGGGGCGCGGGACGTTCGCGGAGTCCGTGCCTTACGTACCACCACGGGACTGGTCGTTCTTGGGCGGATCCCGCTCCTAAACATAAGGGATAGGGGGAAGGTGGCCGGGCCTATCATATCAAAAGGGTTGTCGAAAGAGAACCGTACCGCTTGTGCGTTCTCTCTCTTGCCTGTGTGTACGTACTTTAAGCAGCCTTTCCGTAGATAA
mRNA sequence
ATGCCCCACAATCTGAATCAAAGAGGATGGGTCAAGGAGAAGTTCGGGACGAAACCAGAGTGGATCTGCGGCAAAGCGGTTCCCTTCATACAGCTCGAATCATTCTCAGATGCCCCGAGAGGCATCCTTTCCTTGTTTGTTGGGTTGGTTCACGCGCGCGCAAACGAGCACCGGCCGCAACAGCAGGGAACTATGACCAATAGAGTCAGACACTTAGCTACATCCGCACGCAAAAGGAATGTGGTTCTGGTTGAGGCTTTCTTTCCTTTATTAGTAAAGGGGGCGCGGGACGTTCGCGGAGTCCGTGCCTTACGTACCACCACGGGACTGGTCGTTCTTGGGCGGATCCCGCTCCTAAACATAAGGGATAGGGGGAAGGTGGCCGGGCCTATCATATCAAAAGGGTTGTCGAAAGAGAACCGTACCGCTTGTGCGTTCTCTCTCTTGCCTGTGTGTACGTACTTTAAGCAGCCTTTCCGTAGATAA
Coding sequence (CDS)
ATGCCCCACAATCTGAATCAAAGAGGATGGGTCAAGGAGAAGTTCGGGACGAAACCAGAGTGGATCTGCGGCAAAGCGGTTCCCTTCATACAGCTCGAATCATTCTCAGATGCCCCGAGAGGCATCCTTTCCTTGTTTGTTGGGTTGGTTCACGCGCGCGCAAACGAGCACCGGCCGCAACAGCAGGGAACTATGACCAATAGAGTCAGACACTTAGCTACATCCGCACGCAAAAGGAATGTGGTTCTGGTTGAGGCTTTCTTTCCTTTATTAGTAAAGGGGGCGCGGGACGTTCGCGGAGTCCGTGCCTTACGTACCACCACGGGACTGGTCGTTCTTGGGCGGATCCCGCTCCTAAACATAAGGGATAGGGGGAAGGTGGCCGGGCCTATCATATCAAAAGGGTTGTCGAAAGAGAACCGTACCGCTTGTGCGTTCTCTCTCTTGCCTGTGTGTACGTACTTTAAGCAGCCTTTCCGTAGATAA
Protein sequence
MPHNLNQRGWVKEKFGTKPEWICGKAVPFIQLESFSDAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLVVLGRIPLLNIRDRGKVAGPIISKGLSKENRTACAFSLLPVCTYFKQPFRR
Homology
BLAST of HG10011705 vs. NCBI nr
Match:
RDY14270.1 (hypothetical protein CR513_00684, partial [Mucuna pruriens])
HSP 1 Score: 127.1 bits (318), Expect = 1.4e-25
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
Query: 65 MTNRVRHLATSARKRNVVLVEAFFPLL---VKGARDVRGVRALRTTTGLVVLGRIPLLNI 124
MTNRVRHLATSARKRNVVLVEAFFPLL VKGARDVRGVRA RTTTGLVVLGRIPLLNI
Sbjct: 1 MTNRVRHLATSARKRNVVLVEAFFPLLVKVVKGARDVRGVRAFRTTTGLVVLGRIPLLNI 60
Query: 125 RDRGKVAGPIISK 135
RDRGKVAGPIISK
Sbjct: 61 RDRGKVAGPIISK 73
BLAST of HG10011705 vs. NCBI nr
Match:
GEZ75583.1 (reverse transcriptase domain, reverse transcriptase zinc-binding domain protein [Tanacetum cinerariifolium])
HSP 1 Score: 125.2 bits (313), Expect = 5.2e-25
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0
Query: 37 DAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGAR 96
+APRGILSLFVGLVHARANEHRPQQQ TMTNRVRHLATSARKRNVVL EAFF LLVKGAR
Sbjct: 236 NAPRGILSLFVGLVHARANEHRPQQQETMTNRVRHLATSARKRNVVLFEAFFSLLVKGAR 295
Query: 97 DVRGVRALRTT 108
DVRGVRA TT
Sbjct: 296 DVRGVRASCTT 306
BLAST of HG10011705 vs. NCBI nr
Match:
AGC78907.1 (hypothetical protein [Vicia faba] >AGC78936.1 hypothetical protein [Vicia faba] >AGC79021.1 hypothetical protein [Vicia faba])
HSP 1 Score: 115.2 bits (287), Expect = 5.4e-22
Identity = 64/86 (74.42%), Postives = 66/86 (76.74%), Query Frame = 0
Query: 65 MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLVVLGRIPLLNIRDR 124
MTNRVRHLA SARKRNVVLVEA FPLLV GARDVRGVRA RTTTGLVVLGRIPLLNIRDR
Sbjct: 1 MTNRVRHLAKSARKRNVVLVEALFPLLVLGARDVRGVRAFRTTTGLVVLGRIPLLNIRDR 60
Query: 125 GKVAGPIISKGLSKENRTACAFSLLP 151
G G KG K R +F + P
Sbjct: 61 G---GLSYQKGCKKRTRLPISFDVPP 83
BLAST of HG10011705 vs. NCBI nr
Match:
GEW90610.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Tanacetum cinerariifolium])
HSP 1 Score: 97.1 bits (240), Expect = 1.5e-16
Identity = 51/59 (86.44%), Postives = 52/59 (88.14%), Query Frame = 0
Query: 49 LVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTT 108
L+H RANEHR QQQ TMTNRVRHLATSARKRNVVLVEAFF LLVKGA DVR VRA RTT
Sbjct: 59 LIHVRANEHRLQQQETMTNRVRHLATSARKRNVVLVEAFFSLLVKGAMDVRRVRASRTT 117
BLAST of HG10011705 vs. NCBI nr
Match:
PNX71049.1 (hypothetical protein L195_g058006 [Trifolium pratense])
HSP 1 Score: 86.3 bits (212), Expect = 2.7e-13
Identity = 47/53 (88.68%), Postives = 47/53 (88.68%), Query Frame = 0
Query: 40 RGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLV 93
RGILSLFVGL RANEH PQQQGTMTNRVRHLA SARKRNVVLVEAF PLLV
Sbjct: 36 RGILSLFVGL---RANEHWPQQQGTMTNRVRHLAKSARKRNVVLVEAFLPLLV 85
BLAST of HG10011705 vs. ExPASy TrEMBL
Match:
A0A371IGX6 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00684 PE=4 SV=1)
HSP 1 Score: 127.1 bits (318), Expect = 6.6e-26
Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
Query: 65 MTNRVRHLATSARKRNVVLVEAFFPLL---VKGARDVRGVRALRTTTGLVVLGRIPLLNI 124
MTNRVRHLATSARKRNVVLVEAFFPLL VKGARDVRGVRA RTTTGLVVLGRIPLLNI
Sbjct: 1 MTNRVRHLATSARKRNVVLVEAFFPLLVKVVKGARDVRGVRAFRTTTGLVVLGRIPLLNI 60
Query: 125 RDRGKVAGPIISK 135
RDRGKVAGPIISK
Sbjct: 61 RDRGKVAGPIISK 73
BLAST of HG10011705 vs. ExPASy TrEMBL
Match:
A0A699ITA5 (Reverse transcriptase domain, reverse transcriptase zinc-binding domain protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_547556 PE=4 SV=1)
HSP 1 Score: 125.2 bits (313), Expect = 2.5e-25
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0
Query: 37 DAPRGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLVKGAR 96
+APRGILSLFVGLVHARANEHRPQQQ TMTNRVRHLATSARKRNVVL EAFF LLVKGAR
Sbjct: 236 NAPRGILSLFVGLVHARANEHRPQQQETMTNRVRHLATSARKRNVVLFEAFFSLLVKGAR 295
Query: 97 DVRGVRALRTT 108
DVRGVRA TT
Sbjct: 296 DVRGVRASCTT 306
BLAST of HG10011705 vs. ExPASy TrEMBL
Match:
R4IUB3 (Uncharacterized protein OS=Vicia faba OX=3906 PE=4 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 2.6e-22
Identity = 64/86 (74.42%), Postives = 66/86 (76.74%), Query Frame = 0
Query: 65 MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLVVLGRIPLLNIRDR 124
MTNRVRHLA SARKRNVVLVEA FPLLV GARDVRGVRA RTTTGLVVLGRIPLLNIRDR
Sbjct: 1 MTNRVRHLAKSARKRNVVLVEALFPLLVLGARDVRGVRAFRTTTGLVVLGRIPLLNIRDR 60
Query: 125 GKVAGPIISKGLSKENRTACAFSLLP 151
G G KG K R +F + P
Sbjct: 61 G---GLSYQKGCKKRTRLPISFDVPP 83
BLAST of HG10011705 vs. ExPASy TrEMBL
Match:
A0A2K3KXP4 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g058006 PE=4 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 1.3e-13
Identity = 47/53 (88.68%), Postives = 47/53 (88.68%), Query Frame = 0
Query: 40 RGILSLFVGLVHARANEHRPQQQGTMTNRVRHLATSARKRNVVLVEAFFPLLV 93
RGILSLFVGL RANEH PQQQGTMTNRVRHLA SARKRNVVLVEAF PLLV
Sbjct: 36 RGILSLFVGL---RANEHWPQQQGTMTNRVRHLAKSARKRNVVLVEAFLPLLV 85
BLAST of HG10011705 vs. ExPASy TrEMBL
Match:
A0A6J5W1P4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS4766 PE=4 SV=1)
HSP 1 Score: 77.8 bits (190), Expect = 4.6e-11
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0
Query: 65 MTNRVRHLATSARKRNVVLVEAFFPLLVKGARDVRGVRALRTTTGLV 112
MTNR+RHLATSA KRNVVLVEAFFPLLVKGA DVRGV A RTTT LV
Sbjct: 1 MTNRIRHLATSACKRNVVLVEAFFPLLVKGAHDVRGVCAFRTTTRLV 47
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
RDY14270.1 | 1.4e-25 | 94.52 | hypothetical protein CR513_00684, partial [Mucuna pruriens] | [more] |
GEZ75583.1 | 5.2e-25 | 91.55 | reverse transcriptase domain, reverse transcriptase zinc-binding domain protein ... | [more] |
AGC78907.1 | 5.4e-22 | 74.42 | hypothetical protein [Vicia faba] >AGC78936.1 hypothetical protein [Vicia faba] ... | [more] |
GEW90610.1 | 1.5e-16 | 86.44 | NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Tanacetum cinerariifolium... | [more] |
PNX71049.1 | 2.7e-13 | 88.68 | hypothetical protein L195_g058006 [Trifolium pratense] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A371IGX6 | 6.6e-26 | 94.52 | Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00684 P... | [more] |
A0A699ITA5 | 2.5e-25 | 91.55 | Reverse transcriptase domain, reverse transcriptase zinc-binding domain protein ... | [more] |
R4IUB3 | 2.6e-22 | 74.42 | Uncharacterized protein OS=Vicia faba OX=3906 PE=4 SV=1 | [more] |
A0A2K3KXP4 | 1.3e-13 | 88.68 | Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g058006 PE=4 SV=1 | [more] |
A0A6J5W1P4 | 4.6e-11 | 87.23 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS4766 PE=4... | [more] |
Match Name | E-value | Identity | Description | |