Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAAAATGATTGCAGTGGTTTTGATGTGCATTGTGGTGGTGGCTGCTTTGCAGTTTACCACTGCCAATGCTGAAGACATAGAGGCCAAATTTGATGCTAAATTCAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGCCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCTGGTATTCTTTCTTTTCTCTTTAATTATCTCTCTTTTTTCCCTTCATTTTAATAACTATAAGTTTAAGTTTTTGAATCAATCGGATATGGTATCTGATATGAACCATTCAGTCATCAAATTGTTAATTAAATTTAGATGTAATTTTAGTATTTTTCTAATTTTTTCATTTTTATGAAAGTAGGAGTAATTTTGTCTTTTTACTATGATGTATTAGAGTTTTTATGGAGAGACTATTTAAGCCTTGCTATTAGGTTGTTTGGAGGTAAGTTTTACGATGAATCAAATTTGGCCTTTGTGCTTCTTTCTAGCCTAGAGAAGTAACATTCAAGTGAGATTGATTTGTGCTTCTTTCTAGCCTAGAGAAGTAACATTCAAGTGAGATTGATCATCTTATCTTGTGGAGTGTTCGAATCTTCAGTTAAGAATTTTTTCATTGTCTCAAGATATTTGATCTTAAGGCAATCCGTGTCTATCTCAATCCTTAAGGTTGAGATCGAGTTGATTTGGAGGTTTTAGTGATTGAAAATTAGGGGTTCTCAAAACAAAAGAGTTTCTAATTTCAATTAGCTAGAGTTTTCATATCAGTATCACAGACTCTCTAATATCATTTTCCTCTCCAATTAATATTGATTTTTAGATTTTGGGTTAATCGTCAGTTATTTAACATGCATGGTATCAAAGTATGAGATCCTGTGTTCAGTGTTATTTCTTCTGATTTCCACTTGTGGGGTCTTTTTTACAAATTTTTCAAATCCAGAAATGAGAGGAAGTGTGTTAAAATGTTGACATAATATTACTTTCACTCATAAGTTGTCAATCGATGATTCAACAAATGGTTGCATTTTTAATGACAAATTTGAAATTTGTTGTATTTGTTTTGCAGATAAGCTCCACATCAACCTAGCACATTGA
mRNA sequence
ATGGGGAAGAAAATGATTGCAGTGGTTTTGATGTGCATTGTGGTGGTGGCTGCTTTGCAGTTTACCACTGCCAATGCTGAAGACATAGAGGCCAAATTTGATGCTAAATTCAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGCCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCTGATAAGCTCCACATCAACCTAGCACATTGA
Coding sequence (CDS)
ATGGGGAAGAAAATGATTGCAGTGGTTTTGATGTGCATTGTGGTGGTGGCTGCTTTGCAGTTTACCACTGCCAATGCTGAAGACATAGAGGCCAAATTTGATGCTAAATTCAAGTCTTGCTATGAAACTTGTGAGAAGGAATGTCTTGAAAGTGGCAATGGCCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAGGAAGTTGCTGATAAGCTCCACATCAACCTAGCACATTGA
Protein sequence
MGKKMIAVVLMCIVVVAALQFTTANAEDIEAKFDAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKLHINLAH
Homology
BLAST of HG10010642 vs. NCBI nr
Match:
XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])
HSP 1 Score: 137.1 bits (344), Expect = 6.7e-29
Identity = 70/83 (84.34%), Postives = 72/83 (86.75%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAE--DIEAKFDAKFKSCYETCEKECLESGNGQSFC 60
M KKMIAV LMCIVV+AALQFTTAN E EAKFDAK+KSCYETCEKECLE GNGQSFC
Sbjct: 1 MAKKMIAVFLMCIVVMAALQFTTANEEVAKYEAKFDAKYKSCYETCEKECLEKGNGQSFC 60
Query: 61 EVKCDEDCDEKEVADKLHINLAH 82
EVKCDEDCDEKE ADKLHI AH
Sbjct: 61 EVKCDEDCDEKETADKLHIKPAH 83
BLAST of HG10010642 vs. NCBI nr
Match:
XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])
HSP 1 Score: 132.1 bits (331), Expect = 2.1e-27
Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSF 60
M KKM+AV LMCIVVVAALQF TAN +++ EAKFDAK+KSCYETCEKECL +G+GQSF
Sbjct: 1 MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60
Query: 61 CEVKCDEDCDEKEVADKLHINL 80
CEVKCDEDCDEKEVADKLHI L
Sbjct: 61 CEVKCDEDCDEKEVADKLHIKL 82
BLAST of HG10010642 vs. NCBI nr
Match:
XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])
HSP 1 Score: 128.3 bits (321), Expect = 3.1e-26
Identity = 65/81 (80.25%), Postives = 70/81 (86.42%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAE--DIEAKFDAKFKSCYETCEKECLESGNGQSFC 60
M KKMIAV MCIVV+AALQF TAN E EAKFDAK+KSCYETCEKECLE+G+GQ+FC
Sbjct: 1 MAKKMIAVFFMCIVVMAALQFATANEEVDKYEAKFDAKYKSCYETCEKECLENGSGQTFC 60
Query: 61 EVKCDEDCDEKEVADKLHINL 80
EVKCDEDCDEKE ADKLHI L
Sbjct: 61 EVKCDEDCDEKEKADKLHIEL 81
BLAST of HG10010642 vs. NCBI nr
Match:
XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])
HSP 1 Score: 127.5 bits (319), Expect = 5.3e-26
Identity = 64/81 (79.01%), Postives = 68/81 (83.95%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTAN--AEDIEAKFDAKFKSCYETCEKECLESGNGQSFC 60
M KK+IAV MCIVV+AA QF TAN E EAKF+AK+KSCYETCEKECLE GNGQSFC
Sbjct: 1 MAKKIIAVFFMCIVVMAAFQFATANEEVEKYEAKFEAKYKSCYETCEKECLEGGNGQSFC 60
Query: 61 EVKCDEDCDEKEVADKLHINL 80
EVKCDEDCDEKE ADKLHI L
Sbjct: 61 EVKCDEDCDEKETADKLHIEL 81
BLAST of HG10010642 vs. NCBI nr
Match:
XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])
HSP 1 Score: 127.5 bits (319), Expect = 5.3e-26
Identity = 64/83 (77.11%), Postives = 73/83 (87.95%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESGNGQS 60
M KKMIA+ LMCIVVVAALQF +AN ED EAKFDAK+KSC++TCEKECLE+G+GQS
Sbjct: 1 MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
Query: 61 FCEVKCDEDCDEKEVADKLHINL 80
+CEVKCDEDC+EKEVADKLHI L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83
BLAST of HG10010642 vs. ExPASy Swiss-Prot
Match:
O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)
HSP 1 Score: 62.8 bits (151), Expect = 2.1e-09
Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0
Query: 34 DAKFKSCYETCEKECLESGNGQSFCEVKCDEDCDEKEVADKL 76
+A+FK CY+TC KEC + GNG +FCE+KCD DC K+V +KL
Sbjct: 2 EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43
BLAST of HG10010642 vs. ExPASy TrEMBL
Match:
A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26
Identity = 64/83 (77.11%), Postives = 73/83 (87.95%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESGNGQS 60
M KKMIA+ LMCIVVVAALQF +AN ED EAKFDAK+KSC++TCEKECLE+G+GQS
Sbjct: 1 MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
Query: 61 FCEVKCDEDCDEKEVADKLHINL 80
+CEVKCDEDC+EKEVADKLHI L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83
BLAST of HG10010642 vs. ExPASy TrEMBL
Match:
A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)
HSP 1 Score: 127.5 bits (319), Expect = 2.6e-26
Identity = 64/83 (77.11%), Postives = 73/83 (87.95%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESGNGQS 60
M KKMIA+ LMCIVVVAALQF +AN ED EAKFDAK+KSC++TCEKECLE+G+GQS
Sbjct: 1 MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60
Query: 61 FCEVKCDEDCDEKEVADKLHINL 80
+CEVKCDEDC+EKEVADKLHI L
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83
BLAST of HG10010642 vs. ExPASy TrEMBL
Match:
A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 7.4e-26
Identity = 63/82 (76.83%), Postives = 69/82 (84.15%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAEDI---EAKFDAKFKSCYETCEKECLESGNGQSF 60
M KMIA+ LMCIVVVAALQF AN ED+ EAKFDAK+KSC+ETCEKECL G+GQS+
Sbjct: 1 MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60
Query: 61 CEVKCDEDCDEKEVADKLHINL 80
CEVKCDEDCDEKE ADKLHI L
Sbjct: 61 CEVKCDEDCDEKEAADKLHIEL 82
BLAST of HG10010642 vs. ExPASy TrEMBL
Match:
A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 9.1e-24
Identity = 63/84 (75.00%), Postives = 67/84 (79.76%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESG-NGQ 60
M KKM+AV LMCIVVVA LQF AN ED EAKFDAK+KSCYETCEKECL + NG+
Sbjct: 1 MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60
Query: 61 SFCEVKCDEDCDEKEVADKLHINL 80
SFCEVKCDEDC EKE ADKLHI L
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIEL 84
BLAST of HG10010642 vs. ExPASy TrEMBL
Match:
A0A5D3DM52 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002640 PE=4 SV=1)
HSP 1 Score: 117.5 bits (293), Expect = 2.6e-23
Identity = 60/86 (69.77%), Postives = 74/86 (86.05%), Query Frame = 0
Query: 1 MGKKMIAVVLMCIVVVAALQFTTANAED----IEAKFDAKFKSCYETCEKECLESG-NGQ 60
M KKM+ V+L+CIVV+AAL+F+ AN E+ E+KFDAK+KSCYE+CEKECL++G NGQ
Sbjct: 1 MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 60
Query: 61 SFCEVKCDEDCDEKEVADKLHINLAH 82
SFCEVKCDEDCDEKEVADKL I+ A+
Sbjct: 61 SFCEVKCDEDCDEKEVADKLRIDPAN 86
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038906682.1 | 6.7e-29 | 84.34 | major pollen allergen Ole e 6-like [Benincasa hispida] | [more] |
XP_038891517.1 | 2.1e-27 | 80.49 | major pollen allergen Ole e 6-like [Benincasa hispida] | [more] |
XP_038875643.1 | 3.1e-26 | 80.25 | major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol... | [more] |
XP_038906677.1 | 5.3e-26 | 79.01 | major pollen allergen Ole e 6-like [Benincasa hispida] | [more] |
XP_008456958.1 | 5.3e-26 | 77.11 | PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major... | [more] |
Match Name | E-value | Identity | Description | |
O24172 | 2.1e-09 | 59.52 | Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3BCS2 | 2.6e-26 | 77.11 | Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... | [more] |
A0A1S3C530 | 2.6e-26 | 77.11 | major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... | [more] |
A0A0A0KPA7 | 7.4e-26 | 76.83 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1 | [more] |
A0A0A0K9Z9 | 9.1e-24 | 75.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1 | [more] |
A0A5D3DM52 | 2.6e-23 | 69.77 | Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |