HG10009049 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTCCCCTCGTCCTCACAACCCTCTCTCCACTATCCCTTTTCGAGAGAAACCCACTTTTCTCCATGCTGGCACATCTTTTTCCACATCAACAAATAAAAAAAATCTTCCTTTCATTGGTTCGGATACCGAAGGATACCTCTCTAGTCCCCATCCTTTGGATGTGACTATCTTTGATGATGAGCCAGTCGAAGATAATCTACCTTTATGCACCCTTCCCCCTCTCCCACCCGACATCAGCCCTAGACAAGGCCCTTCACCCGACAACTCGACCTCTCCCCTTTCCTCTTATCCTATTCACCAAGCTCACCCGACCTCCTCAACAAACCCGCCATTCAACCTAAATGATTTAGCAACTCTCTTATCAAACCATGATTTGTGTGTTATGGCCATTCCATCTTCCCATCCACCTCCAAAAATAAAAAAACCAACAAAAGCAACAGGAAAAAAAACCAAACTCCAAAGAGAGACTCAAGGCCTTTATTCATCGATCAACTATGACAAATCAGCTACCTTGGCGATTCGGGAGGGCTTCTTGACAAACTAA ATGCTTTCCCCTCGTCCTCACAACCCTCTCTCCACTATCCCTTTTCGAGAGAAACCCACTTTTCTCCATGCTGGCACATCTTTTTCCACATCAACAAATAAAAAAAATCTTCCTTTCATTGGTTCGGATACCGAAGGATACCTCTCTAGTCCCCATCCTTTGGATGTGACTATCTTTGATGATGAGCCAGTCGAAGATAATCTACCTTTATGCACCCTTCCCCCTCTCCCACCCGACATCAGCCCTAGACAAGGCCCTTCACCCGACAACTCGACCTCTCCCCTTTCCTCTTATCCTATTCACCAAGCTCACCCGACCTCCTCAACAAACCCGCCATTCAACCTAAATGATTTAGCAACTCTCTTATCAAACCATGATTTGTGTGTTATGGCCATTCCATCTTCCCATCCACCTCCAAAAATAAAAAAACCAACAAAAGCAACAGGAAAAAAAACCAAACTCCAAAGAGAGACTCAAGGCCTTTATTCATCGATCAACTATGACAAATCAGCTACCTTGGCGATTCGGGAGGGCTTCTTGACAAACTAA ATGCTTTCCCCTCGTCCTCACAACCCTCTCTCCACTATCCCTTTTCGAGAGAAACCCACTTTTCTCCATGCTGGCACATCTTTTTCCACATCAACAAATAAAAAAAATCTTCCTTTCATTGGTTCGGATACCGAAGGATACCTCTCTAGTCCCCATCCTTTGGATGTGACTATCTTTGATGATGAGCCAGTCGAAGATAATCTACCTTTATGCACCCTTCCCCCTCTCCCACCCGACATCAGCCCTAGACAAGGCCCTTCACCCGACAACTCGACCTCTCCCCTTTCCTCTTATCCTATTCACCAAGCTCACCCGACCTCCTCAACAAACCCGCCATTCAACCTAAATGATTTAGCAACTCTCTTATCAAACCATGATTTGTGTGTTATGGCCATTCCATCTTCCCATCCACCTCCAAAAATAAAAAAACCAACAAAAGCAACAGGAAAAAAAACCAAACTCCAAAGAGAGACTCAAGGCCTTTATTCATCGATCAACTATGACAAATCAGCTACCTTGGCGATTCGGGAGGGCTTCTTGACAAACTAA MLSPRPHNPLSTIPFREKPTFLHAGTSFSTSTNKKNLPFIGSDTEGYLSSPHPLDVTIFDDEPVEDNLPLCTLPPLPPDISPRQGPSPDNSTSPLSSYPIHQAHPTSSTNPPFNLNDLATLLSNHDLCVMAIPSSHPPPKIKKPTKATGKKTKLQRETQGLYSSINYDKSATLAIREGFLTN Homology
BLAST of HG10009049 vs. NCBI nr
Match: TYK05133.1 (hypothetical protein E5676_scaffold1769G00370 [Cucumis melo var. makuwa]) HSP 1 Score: 102.4 bits (254), Expect = 4.1e-18 Identity = 63/128 (49.22%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of HG10009049 vs. NCBI nr
Match: KAA0050510.1 (hypothetical protein E6C27_scaffold175G001530 [Cucumis melo var. makuwa]) HSP 1 Score: 72.0 bits (175), Expect = 5.9e-09 Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of HG10009049 vs. NCBI nr
Match: KAA0063298.1 (hypothetical protein E6C27_scaffold205G001210 [Cucumis melo var. makuwa]) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-04 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of HG10009049 vs. NCBI nr
Match: TYK31477.1 (hypothetical protein E5676_scaffold455G007930 [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 4.4e-04 Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of HG10009049 vs. NCBI nr
Match: KAA0064805.1 (DNA-directed RNA polymerase I subunit 2 [Cucumis melo var. makuwa]) HSP 1 Score: 54.7 bits (130), Expect = 9.8e-04 Identity = 29/47 (61.70%), Postives = 32/47 (68.09%), Query Frame = 0
BLAST of HG10009049 vs. ExPASy TrEMBL
Match: A0A5D3BZG4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00370 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18 Identity = 63/128 (49.22%), Postives = 78/128 (60.94%), Query Frame = 0
BLAST of HG10009049 vs. ExPASy TrEMBL
Match: A0A5A7U5M3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001530 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.9e-09 Identity = 54/125 (43.20%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of HG10009049 vs. ExPASy TrEMBL
Match: A0A0A0LHM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G078070 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 5.4e-08 Identity = 58/147 (39.46%), Postives = 74/147 (50.34%), Query Frame = 0
BLAST of HG10009049 vs. ExPASy TrEMBL
Match: A0A5A7V6T7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001210 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.6e-05 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of HG10009049 vs. ExPASy TrEMBL
Match: A0A0A0LW63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181550 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.6e-05 Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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