HG10008169 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAGTTTAAAAATAATACGTAGAGTGTTAGTCATATTCGTTCGAAATTTTCTCATATAATTTGGAGGTGAAGAAATGAATTTTGAGACAAGACCGGAGGGGAAGCAAAAATTCTGGAGTAAATAGTTCAGAAAGGAGGGTGAAATCTGGAGACTTTTATCTCCAATTCATTGTAAAAAATCCTTTTATTTGTTGTTCGGCTAACTTCCACATACCACTCTTTACTAATTTTGAAGGAATAACTTTTTTGTTCCAATGGCAATTGTGTTTAGAGAAACTCCCTTCGAGTTCTGCTTTGATTTTTTGTGGGGTAGATTTACTTCTGATTTGTGGTTGGTGTGGACACTTAGGAGAGAATCTACATTATATCCTTTGGCTCTGTAAAGTGGCTTGCAAGGAATGAGCTCGGTCTTCCTTTGCTCATATGTGGTGCAGTACTTCAAGAAAAACAATCTGTGTTCTTATGGAGATTCATGATCAACTGCTGGTTTTATAAACTCAATGTTGATGCAGGTTTCATTCCAGAAACAAATGAAGCCTCAGCGAGAATTATCATTCGAGATAATGAAGGGCGGGTCATGCTACCTGCTTTCAAAAGTTTAGGTCCTCTTTCTCATATGGACTTGGCCGAGGGATGTGCAGTGCAGACTGGGATCTCCCTATCTCTTGAAATGGATTTTCGATCTTTGATTGTGGAAACTGATTCGTTGCAGGTTCATCATTTGTTATATTCTGAGGTGGAAGACATTTATGAACTAGGTCGTTTATTCTTTACTTTAAAGAATGGTTTGTTGCGCTCCTGTGTATATTTCTTCTCTCTCCTCACTCTGGAAAGAGAGCTGCTCATTCGTTGA ATGGAGAGAATCTACATTATATCCTTTGGCTCTGTAAAGTGGCTTGCAAGGAATGAGCTCGGTCTTCCTTTGCTCATATGTGGTGCAGTACTTCAAGAAAAACAATCTGTGTTCTTATGGAGATTCATGATCAACTGCTGGTTTTATAAACTCAATGTTGATGCAGGTTTCATTCCAGAAACAAATGAAGCCTCAGCGAGAATTATCATTCGAGATAATGAAGGGCGGGTCATGCTACCTGCTTTCAAAAGTTTAGGTCCTCTTTCTCATATGGACTTGGCCGAGGGATGTGCAGTGCAGACTGGGATCTCCCTATCTCTTGAAATGGATTTTCGATCTTTGATTGTGGAAACTGATTCGTTGCAGGTTCATCATTTGTTATATTCTGAGGTGGAAGACATTTATGAACTAGGTCGTTTATTCTTTACTTTAAAGAATGGTTTGTTGCGCTCCTGTGTATATTTCTTCTCTCTCCTCACTCTGGAAAGAGAGCTGCTCATTCGTTGA ATGGAGAGAATCTACATTATATCCTTTGGCTCTGTAAAGTGGCTTGCAAGGAATGAGCTCGGTCTTCCTTTGCTCATATGTGGTGCAGTACTTCAAGAAAAACAATCTGTGTTCTTATGGAGATTCATGATCAACTGCTGGTTTTATAAACTCAATGTTGATGCAGGTTTCATTCCAGAAACAAATGAAGCCTCAGCGAGAATTATCATTCGAGATAATGAAGGGCGGGTCATGCTACCTGCTTTCAAAAGTTTAGGTCCTCTTTCTCATATGGACTTGGCCGAGGGATGTGCAGTGCAGACTGGGATCTCCCTATCTCTTGAAATGGATTTTCGATCTTTGATTGTGGAAACTGATTCGTTGCAGGTTCATCATTTGTTATATTCTGAGGTGGAAGACATTTATGAACTAGGTCGTTTATTCTTTACTTTAAAGAATGGTTTGTTGCGCTCCTGTGTATATTTCTTCTCTCTCCTCACTCTGGAAAGAGAGCTGCTCATTCGTTGA MERIYIISFGSVKWLARNELGLPLLICGAVLQEKQSVFLWRFMINCWFYKLNVDAGFIPETNEASARIIIRDNEGRVMLPAFKSLGPLSHMDLAEGCAVQTGISLSLEMDFRSLIVETDSLQVHHLLYSEVEDIYELGRLFFTLKNGLLRSCVYFFSLLTLERELLIR Homology
BLAST of HG10008169 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia]) HSP 1 Score: 68.2 bits (165), Expect = 7.9e-08 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of HG10008169 vs. NCBI nr
Match: EEE59920.1 (hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]) HSP 1 Score: 65.1 bits (157), Expect = 6.7e-07 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of HG10008169 vs. NCBI nr
Match: EEC76169.1 (hypothetical protein OsI_13484 [Oryza sativa Indica Group]) HSP 1 Score: 65.1 bits (157), Expect = 6.7e-07 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of HG10008169 vs. NCBI nr
Match: XP_030946082.1 (uncharacterized protein LOC115970617 [Quercus lobata]) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-06 Identity = 39/107 (36.45%), Postives = 55/107 (51.40%), Query Frame = 0
BLAST of HG10008169 vs. NCBI nr
Match: XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia]) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-06 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of HG10008169 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.8e-08 Identity = 40/96 (41.67%), Postives = 56/96 (58.33%), Query Frame = 0
BLAST of HG10008169 vs. ExPASy TrEMBL
Match: B8AJV1 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_13484 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.2e-07 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of HG10008169 vs. ExPASy TrEMBL
Match: B9FBS8 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=OsJ_12548 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.2e-07 Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0
BLAST of HG10008169 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 9.4e-07 Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of HG10008169 vs. ExPASy TrEMBL
Match: A0A5B7BLL9 (RNase H domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_039108 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05 Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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