HG10008123 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10008123
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr10: 20032775 .. 20035189 (-)
RNA-Seq Expression	HG10008123
Synteny	HG10008123

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTGTTTGTTACTCGCTATTAATAATCCCATCAAGCTCAATAAATTCAAGCTCAAACTAGTCAAATTCGCCTCAACTGCAATTGCTCAACCAAACCCATGTTCTTTTTCACACAGTGAAGATGAACAAAGTACCACCTCCATCAACACAACTTTGCATGTTCAATGTAACCCATCAAAGGTGGCCCAAATCCTAGAGAGTCTCCGAAGGGAGCCCAACATTGCGTTTTCCTTTTTTCGCGAATTGGAGGAATGGGGCTTTCAACATAACATCTCTACTTATGCAGCTCTTATTAGGATATTGTGCTCTTGGGGTTTGGAGAGAAAGCTCGAATCTCTGTTCTCGAATCTCATTGCCTCAAAGAGAAGGGAATTTGATGTTTTAGATTTGCTTGAATCACTTAATCAAGGGTATGTGGTGGATGGCTCATTCATTCGAGCCTATGATGCCTTAATCAAGGCTTATGTCAGTGTTAGCTTGTTTGATAGCGTTGTGGATTTACTTTTCCGATTAGAAAGGAAGGGATTTGTTCCACATATTTTCACTTGTAATTTTCTCTTGAACCGCCTTATCGAGCATGGGAAAATGAATATGGCTCTAGTTGTGTACAAGCAGTTGAAGAGGTTTGGTTGCCAACCTAATGATTACACTTATGCTACTGTAATAAAAGCCCTTTGTAAAATAGGTCACATGGAAGAAGCTATAGACATTTTTGAGGAGATGAGTGAATCTGGGGTGGTTCCTAATGCCTTTGCTTGTGCTGCATATATTGAAGGGTTGTGTACCCACGATTGTTCAACTTCAGGGTATCAGTTGCTACAAGCATGGAGAGCAGAACAAGTCCCAATCGACGCGTATGCTTACTCTGTAGTAATTCGTGGATTTTGTGAGGAGATGAAAATAGATGAGGCAGAAAATGTCTTTCTTGATATGGAAAAATATGGAGTAGTTCCAGATGCACTAACTTATGGTGTGTTGATCAATGGTTATTGCAAGAAGTTGATGTTGCAAAAAGCTTTGTCTCTTCACAGTCTCATGTTGTCAAAAGGTGTAAAATCAAATTGTGTGATCATCAGCTCTATCCTTCAATGCTTGTTTAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAATATTTCAGGGTGAGGGATTATTTTTGGACAAGGTTGTATACAATATTGTTGTTCATGCCCTATGTGAACTAGGAAAATTGGAAGAAGCTATTGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTCGTGCATTATACAACAATGATTAAAGGTTTTTTTGTTCAAGGAAAAATTCATGAAGCAATGATAATGTTTGAAAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATAATGTGCTTGCTACTGGATTATCTAGAAACGGTCTTGTATCTAAGGTCCATGGCCTTCTAGATTACATGGAGGAACATGGTTTGAAAGAAGACCCTAAGATACGCGACCTGGTAATTGAAAATTTATGCATAGGAGGCAAAGTGAAAGAAGCGACTGAATTTTTTAACAGTTTAGAAGTAAAGACGGTAGATAACTATTCTGCCATGATTAATGGGTATTGTGCAGCCAACCATACGAAAGATGCATATGAACTTTTTATTAATTTGTCCAAGAAAGGAGTTTTTATTAAAAGAAGTGCTCTTGTTAGGCTAGTTAGTAGCCTTTGCATGGAAGATTCTAGTGATAGAGATATTAAGGTGATGAAACAACTTCCAATTAGGAATGTGGAGGCTAATGAAATTGTGTACAATAAAGTCATAGCTTCCCTTTGCCGGGAAAGAAATATGAAGAAGGCCCAATGTTTATTTGATTTTTTAGTCAGTTCTGGGTTAACTCCTGATCTCATCACTTACACAATGATGATAAATGGTTATTGCAATATTAATTTCTTGAGAAAAGCTTATGAACTTCTGTGTGATATGAAAAATCGAGGGAGGGAGCCTGATATTTTTATCTATACAATTTTACTTGATGGTCAATTTAAAACCAGAGTACGAGAGCTTTGCTCCTCAGTAGAAATAGCTTTTACTTCAACAATTTTTGATGAAATGAAGGACATGAAGTTCACTCCAGACGTTGTTTACTACACTGTGATGATTGATGGGTATTGTAAAATGAACAAACTTAATGATGCTGTTGTCCTCTTTGAGGAAATGATTGATCAAGGAATAGAGCCTGATACAGTTACTTATACTGCCCTACTGTCCGGCTGTTGTAGAAGTGGAAATACGGAGAAGGCTCAAACCCTATATTATGATATGGTGTCTAAGGGAATTCTCCCTCCTAAACATTTTTCATTTCTGTTGCATCACGATACTCTAAAAACCAAGAAAGTGCAACTTTACAAGCACCTTACTGAATAA

mRNA sequence

ATGAATTGTTTGTTACTCGCTATTAATAATCCCATCAAGCTCAATAAATTCAAGCTCAAACTAGTCAAATTCGCCTCAACTGCAATTGCTCAACCAAACCCATGTTCTTTTTCACACAGTGAAGATGAACAAAGTACCACCTCCATCAACACAACTTTGCATGTTCAATGTAACCCATCAAAGGTGGCCCAAATCCTAGAGAGTCTCCGAAGGGAGCCCAACATTGCGTTTTCCTTTTTTCGCGAATTGGAGGAATGGGGCTTTCAACATAACATCTCTACTTATGCAGCTCTTATTAGGATATTGTGCTCTTGGGGTTTGGAGAGAAAGCTCGAATCTCTGTTCTCGAATCTCATTGCCTCAAAGAGAAGGGAATTTGATGTTTTAGATTTGCTTGAATCACTTAATCAAGGGTATGTGGTGGATGGCTCATTCATTCGAGCCTATGATGCCTTAATCAAGGCTTATGTCAGTGTTAGCTTGTTTGATAGCGTTGTGGATTTACTTTTCCGATTAGAAAGGAAGGGATTTGTTCCACATATTTTCACTTGTAATTTTCTCTTGAACCGCCTTATCGAGCATGGGAAAATGAATATGGCTCTAGTTGTGTACAAGCAGTTGAAGAGGTTTGGTTGCCAACCTAATGATTACACTTATGCTACTGTAATAAAAGCCCTTTGTAAAATAGGTCACATGGAAGAAGCTATAGACATTTTTGAGGAGATGAGTGAATCTGGGGTGGTTCCTAATGCCTTTGCTTGTGCTGCATATATTGAAGGGTTGTGTACCCACGATTGTTCAACTTCAGGGTATCAGTTGCTACAAGCATGGAGAGCAGAACAAGTCCCAATCGACGCGTATGCTTACTCTGTAGTAATTCGTGGATTTTGTGAGGAGATGAAAATAGATGAGGCAGAAAATGTCTTTCTTGATATGGAAAAATATGGAGTAGTTCCAGATGCACTAACTTATGGTGTGTTGATCAATGGTTATTGCAAGAAGTTGATGTTGCAAAAAGCTTTGTCTCTTCACAGTCTCATGTTGTCAAAAGGTGTAAAATCAAATTGTGTGATCATCAGCTCTATCCTTCAATGCTTGTTTAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAATATTTCAGGGTGAGGGATTATTTTTGGACAAGGTTGTATACAATATTGTTGTTCATGCCCTATGTGAACTAGGAAAATTGGAAGAAGCTATTGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTCGTGCATTATACAACAATGATTAAAGGTTTTTTTGTTCAAGGAAAAATTCATGAAGCAATGATAATGTTTGAAAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATAATGTGCTTGCTACTGGATTATCTAGAAACGGTCTTGTATCTAAGGTCCATGGCCTTCTAGATTACATGGAGGAACATGGTTTGAAAGAAGACCCTAAGATACGCGACCTGGTAATTGAAAATTTATGCATAGGAGGCAAAGTGAAAGAAGCGACTGAATTTTTTAACAGTTTAGAAGTAAAGACGGTAGATAACTATTCTGCCATGATTAATGGGTATTGTGCAGCCAACCATACGAAAGATGCATATGAACTTTTTATTAATTTGTCCAAGAAAGGAGTTTTTATTAAAAGAAGTGCTCTTGTTAGGCTAGTTAGTAGCCTTTGCATGGAAGATTCTAGTGATAGAGATATTAAGGTGATGAAACAACTTCCAATTAGGAATGTGGAGGCTAATGAAATTGTGTACAATAAAGTCATAGCTTCCCTTTGCCGGGAAAGAAATATGAAGAAGGCCCAATGTTTATTTGATTTTTTAGTCAGTTCTGGGTTAACTCCTGATCTCATCACTTACACAATGATGATAAATGGTTATTGCAATATTAATTTCTTGAGAAAAGCTTATGAACTTCTGTGTGATATGAAAAATCGAGGGAGGGAGCCTGATATTTTTATCTATACAATTTTACTTGATGGTCAATTTAAAACCAGAGTACGAGAGCTTTGCTCCTCAGTAGAAATAGCTTTTACTTCAACAATTTTTGATGAAATGAAGGACATGAAGTTCACTCCAGACGTTGTTTACTACACTGTGATGATTGATGGGTATTGTAAAATGAACAAACTTAATGATGCTGTTGTCCTCTTTGAGGAAATGATTGATCAAGGAATAGAGCCTGATACAGTTACTTATACTGCCCTACTGTCCGGCTGTTGTAGAAGTGGAAATACGGAGAAGGCTCAAACCCTATATTATGATATGGTGTCTAAGGGAATTCTCCCTCCTAAACATTTTTCATTTCTGTTGCATCACGATACTCTAAAAACCAAGAAAGTGCAACTTTACAAGCACCTTACTGAATAA

Coding sequence (CDS)

ATGAATTGTTTGTTACTCGCTATTAATAATCCCATCAAGCTCAATAAATTCAAGCTCAAACTAGTCAAATTCGCCTCAACTGCAATTGCTCAACCAAACCCATGTTCTTTTTCACACAGTGAAGATGAACAAAGTACCACCTCCATCAACACAACTTTGCATGTTCAATGTAACCCATCAAAGGTGGCCCAAATCCTAGAGAGTCTCCGAAGGGAGCCCAACATTGCGTTTTCCTTTTTTCGCGAATTGGAGGAATGGGGCTTTCAACATAACATCTCTACTTATGCAGCTCTTATTAGGATATTGTGCTCTTGGGGTTTGGAGAGAAAGCTCGAATCTCTGTTCTCGAATCTCATTGCCTCAAAGAGAAGGGAATTTGATGTTTTAGATTTGCTTGAATCACTTAATCAAGGGTATGTGGTGGATGGCTCATTCATTCGAGCCTATGATGCCTTAATCAAGGCTTATGTCAGTGTTAGCTTGTTTGATAGCGTTGTGGATTTACTTTTCCGATTAGAAAGGAAGGGATTTGTTCCACATATTTTCACTTGTAATTTTCTCTTGAACCGCCTTATCGAGCATGGGAAAATGAATATGGCTCTAGTTGTGTACAAGCAGTTGAAGAGGTTTGGTTGCCAACCTAATGATTACACTTATGCTACTGTAATAAAAGCCCTTTGTAAAATAGGTCACATGGAAGAAGCTATAGACATTTTTGAGGAGATGAGTGAATCTGGGGTGGTTCCTAATGCCTTTGCTTGTGCTGCATATATTGAAGGGTTGTGTACCCACGATTGTTCAACTTCAGGGTATCAGTTGCTACAAGCATGGAGAGCAGAACAAGTCCCAATCGACGCGTATGCTTACTCTGTAGTAATTCGTGGATTTTGTGAGGAGATGAAAATAGATGAGGCAGAAAATGTCTTTCTTGATATGGAAAAATATGGAGTAGTTCCAGATGCACTAACTTATGGTGTGTTGATCAATGGTTATTGCAAGAAGTTGATGTTGCAAAAAGCTTTGTCTCTTCACAGTCTCATGTTGTCAAAAGGTGTAAAATCAAATTGTGTGATCATCAGCTCTATCCTTCAATGCTTGTTTAGGATGCAAATGTATTCAGAAGTAGTGAACCAATTTAAAATATTTCAGGGTGAGGGATTATTTTTGGACAAGGTTGTATACAATATTGTTGTTCATGCCCTATGTGAACTAGGAAAATTGGAAGAAGCTATTGAGTTGTTAGAAGATATGACAAGTAGACAGATCCAGATGGATGTCGTGCATTATACAACAATGATTAAAGGTTTTTTTGTTCAAGGAAAAATTCATGAAGCAATGATAATGTTTGAAAATTTGAAGAAAAATGGTATTGAGCCTGACACCATCACTTATAATGTGCTTGCTACTGGATTATCTAGAAACGGTCTTGTATCTAAGGTCCATGGCCTTCTAGATTACATGGAGGAACATGGTTTGAAAGAAGACCCTAAGATACGCGACCTGGTAATTGAAAATTTATGCATAGGAGGCAAAGTGAAAGAAGCGACTGAATTTTTTAACAGTTTAGAAGTAAAGACGGTAGATAACTATTCTGCCATGATTAATGGGTATTGTGCAGCCAACCATACGAAAGATGCATATGAACTTTTTATTAATTTGTCCAAGAAAGGAGTTTTTATTAAAAGAAGTGCTCTTGTTAGGCTAGTTAGTAGCCTTTGCATGGAAGATTCTAGTGATAGAGATATTAAGGTGATGAAACAACTTCCAATTAGGAATGTGGAGGCTAATGAAATTGTGTACAATAAAGTCATAGCTTCCCTTTGCCGGGAAAGAAATATGAAGAAGGCCCAATGTTTATTTGATTTTTTAGTCAGTTCTGGGTTAACTCCTGATCTCATCACTTACACAATGATGATAAATGGTTATTGCAATATTAATTTCTTGAGAAAAGCTTATGAACTTCTGTGTGATATGAAAAATCGAGGGAGGGAGCCTGATATTTTTATCTATACAATTTTACTTGATGGTCAATTTAAAACCAGAGTACGAGAGCTTTGCTCCTCAGTAGAAATAGCTTTTACTTCAACAATTTTTGATGAAATGAAGGACATGAAGTTCACTCCAGACGTTGTTTACTACACTGTGATGATTGATGGGTATTGTAAAATGAACAAACTTAATGATGCTGTTGTCCTCTTTGAGGAAATGATTGATCAAGGAATAGAGCCTGATACAGTTACTTATACTGCCCTACTGTCCGGCTGTTGTAGAAGTGGAAATACGGAGAAGGCTCAAACCCTATATTATGATATGGTGTCTAAGGGAATTCTCCCTCCTAAACATTTTTCATTTCTGTTGCATCACGATACTCTAAAAACCAAGAAAGTGCAACTTTACAAGCACCTTACTGAATAA

Protein sequence

MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPSKVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIASKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPHIFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFEEMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEMKIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIISSILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKVHGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAANHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVYNKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKNRGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPKHFSFLLHHDTLKTKKVQLYKHLTE

Homology

[Close]

BLAST of HG10008123 vs. NCBI nr
Match: XP_038876888.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038876889.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038876890.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038876891.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038876892.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038876893.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038876894.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038876895.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1401.3 bits (3626), Expect = 0.0e+00
Identity = 706/804 (87.81%), Postives = 743/804 (92.41%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNPIKLN  KLKLVKF STAIAQ NPCSFSHS+DE+STTS NTTLH++C PS
Sbjct: 1   MNCLLLAVNNPIKLNILKLKLVKFTSTAIAQLNPCSFSHSDDERSTTSFNTTLHIRCKPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV QILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGL RKLESLF NLI 
Sbjct: 61  KVVQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLGRKLESLFLNLIG 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ EFDVLDLL+SLNQ  VVDGSFIRAYDALIKAYVSV+LFDSV+DLL R ERKGFVPH
Sbjct: 121 SKKMEFDVLDLLDSLNQECVVDGSFIRAYDALIKAYVSVNLFDSVMDLLLRSERKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFT N+LLN LIEHGK NMALVVYKQLKRFGCQPNDYTYATVIKALCKIG+MEEAIDIFE
Sbjct: 181 IFTYNYLLNSLIEHGKTNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGNMEEAIDIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMSESGVVPNAFACAAYIEGLCT+DCSTSGYQLLQAWRAEQ PIDAYAYSVVIRGFCEEM
Sbjct: 241 EMSESGVVPNAFACAAYIEGLCTYDCSTSGYQLLQAWRAEQFPIDAYAYSVVIRGFCEEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           K+DEAE VFLDMEKYGVVPDA TYGVLINGYCKKL LQKALSLHSLMLSKG+KSNCVIIS
Sbjct: 301 KLDEAEYVFLDMEKYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLSKGLKSNCVIIS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
           SILQCL RMQMYSEVVNQFK FQ +G+FLDKVVYNIVVHALCELGKLEEAIELLEDMTSR
Sbjct: 361 SILQCLLRMQMYSEVVNQFKAFQEKGVFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDVVHYTTMIKGFF+QGKIHEAM+MFENLKKNG+EPDTITYNVLA GL RNGLVS V
Sbjct: 421 QIQMDVVHYTTMIKGFFLQGKIHEAMMMFENLKKNGVEPDTITYNVLAAGLCRNGLVSNV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
            GLLDYMEEH L++DPK+ DLVIENLCIGGKVKEAT FFNSLEVKTVDNYSAMINGYCAA
Sbjct: 481 QGLLDYMEEHDLRKDPKMPDLVIENLCIGGKVKEATVFFNSLEVKTVDNYSAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           N TK AYELF+NLSKKGV IKRS+LVRLVS LCMEDSS R I+V+KQLPI NVEANEIVY
Sbjct: 541 NRTKSAYELFVNLSKKGVLIKRSSLVRLVSRLCMEDSSIRAIEVIKQLPIMNVEANEIVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           NKVIASLCR RNMK AQ LFD LV +GLTPDLITYT+MINGYC INFLR+AYELLCDMKN
Sbjct: 601 NKVIASLCRARNMKMAQSLFDCLVCAGLTPDLITYTVMINGYCKINFLREAYELLCDMKN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGY 720
           RGREPDIFIYT+LLDG+FKTRVRELCSSVEI       +EMKDMK TPDVVYYTV+IDGY
Sbjct: 661 RGREPDIFIYTVLLDGRFKTRVRELCSSVEIV------NEMKDMKITPDVVYYTVLIDGY 720

Query: 721 CKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPK 780
           CKMN LNDA VLFEEM+DQGIE DTVTYTALLSGCCRSG+ EKAQTL YDM+SKGILPPK
Sbjct: 721 CKMNNLNDAFVLFEEMVDQGIEADTVTYTALLSGCCRSGDMEKAQTLCYDMMSKGILPPK 780

Query: 781 HFSFLLHHDTLKTKKVQLYKHLTE 805
            FS LLHHDTLKTKK+QLYKH TE
Sbjct: 781 IFSHLLHHDTLKTKKMQLYKHFTE 798

[Close]

BLAST of HG10008123 vs. NCBI nr
Match: XP_038894511.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038894512.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida] >XP_038894513.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1385.5 bits (3585), Expect = 0.0e+00
Identity = 695/804 (86.44%), Postives = 737/804 (91.67%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLL A+NNP  LNK KLKLVKFASTAIAQ NPC FSHS+DEQS TS NTTL VQC PS
Sbjct: 1   MNCLLHAVNNPTNLNKLKLKLVKFASTAIAQLNPCFFSHSDDEQSVTSFNTTLDVQCKPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV +ILESLRREPNIAFSFF ELEE GFQHNISTYAALIR+LCSWGL +KLESLF NLI 
Sbjct: 61  KVVRILESLRREPNIAFSFFHELEERGFQHNISTYAALIRVLCSWGLGKKLESLFLNLIG 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ EFDVLDLLESLNQG VVD SFIRAYDALIKAY SV+LFDSVVDLLFRLERKGFVPH
Sbjct: 121 SKKMEFDVLDLLESLNQGCVVDDSFIRAYDALIKAYASVNLFDSVVDLLFRLERKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCN+LLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYA VIKALCKIG+MEEAIDIFE
Sbjct: 181 IFTCNYLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYAIVIKALCKIGNMEEAIDIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EM+ESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAE+ PIDAYAY VVIRGFCEEM
Sbjct: 241 EMTESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAERFPIDAYAYYVVIRGFCEEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAE VFLDME YGVVPDA TYGVLINGYCK L LQKALSLHSLMLSKG+KSNCVI+S
Sbjct: 301 KIDEAEYVFLDMENYGVVPDAQTYGVLINGYCKTLNLQKALSLHSLMLSKGIKSNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
            ILQCL  MQMYSEVVNQFK+FQ +G+FLDKVV+NIV+HALCELGKLEEAIELLEDMTSR
Sbjct: 361 FILQCLLTMQMYSEVVNQFKVFQDKGVFLDKVVFNIVIHALCELGKLEEAIELLEDMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDV HYTTMIKGFFVQGK HEAMIMF+NLKKNG+EPDTITYNV+A GLSRNGLVSKV
Sbjct: 421 QIQMDVKHYTTMIKGFFVQGKTHEAMIMFDNLKKNGVEPDTITYNVVAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
            GLLDYMEEHGLK+D KI DLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA
Sbjct: 481 QGLLDYMEEHGLKKDSKIPDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           NH K AYELF+NLSKKG FIKRS+LVRLVSSLCMEDS  R I+V+K LPI +VEANEIVY
Sbjct: 541 NHKKAAYELFVNLSKKGDFIKRSSLVRLVSSLCMEDSCVRAIEVIKHLPIIDVEANEIVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           NKVIASLCR RNMK AQ LFD LV +GLTPDLITYTMMI+GYC INFLR+A+ELLCDMKN
Sbjct: 601 NKVIASLCRARNMKMAQSLFDCLVCAGLTPDLITYTMMIDGYCKINFLREAHELLCDMKN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGY 720
           RGREPDIFIYT+LLD QFKTRV+ELC SVE  FTSTIFDEMK MKFTPDVVYYTV+IDG+
Sbjct: 661 RGREPDIFIYTVLLDSQFKTRVQELCPSVETPFTSTIFDEMKGMKFTPDVVYYTVLIDGF 720

Query: 721 CKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPK 780
           CKMN LNDA V FEEM+DQGIE DTVT+TALLSGCCRSG+ EKAQTL YDM+SKGILPPK
Sbjct: 721 CKMNNLNDAFVFFEEMVDQGIEADTVTFTALLSGCCRSGDMEKAQTLCYDMISKGILPPK 780

Query: 781 HFSFLLHHDTLKTKKVQLYKHLTE 805
            FS+LLH DTLKTKK+  YKHLT+
Sbjct: 781 IFSYLLHQDTLKTKKMPHYKHLTK 804

[Close]

BLAST of HG10008123 vs. NCBI nr
Match: XP_008443906.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Cucumis melo] >XP_008443907.1 PREDICTED: pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Cucumis melo] >XP_016899822.1 PREDICTED: pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 [Cucumis melo])

HSP 1 Score: 1350.9 bits (3495), Expect = 0.0e+00
Identity = 672/796 (84.42%), Postives = 733/796 (92.09%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNP KLNK KLKLVKFASTAIAQ N C FSHS+DEQ+TTS NTTL+VQC PS
Sbjct: 1   MNCLLLAVNNPTKLNKLKLKLVKFASTAIAQLNSCFFSHSDDEQTTTSFNTTLNVQCKPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV Q+LESLRREPNIAFSFFRELEE GFQHNISTYAALIRILCSW L RKLE+LF NLI 
Sbjct: 61  KVVQVLESLRREPNIAFSFFRELEERGFQHNISTYAALIRILCSWRLRRKLETLFLNLIG 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ +FDVLDLLESLNQG V+D SFIRAYDALIKAYVSV+LFDSVVDLLFRL RKGFVPH
Sbjct: 121 SKKMDFDVLDLLESLNQGCVLDASFIRAYDALIKAYVSVNLFDSVVDLLFRLGRKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCN+LLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIG+MEEAIDIFE
Sbjct: 181 IFTCNYLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGNMEEAIDIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMS  G+VPNAFACAAYIE LCTHDCSTSGYQLLQAWRAE+ PIDAYAYSVVIRGFC+EM
Sbjct: 241 EMSGYGMVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAERFPIDAYAYSVVIRGFCDEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAE+VFLDME YGVVPDA TY VLI+GYCKKL LQKALSLHSLMLSKG+KSNCVI+S
Sbjct: 301 KIDEAESVFLDMENYGVVPDAQTYSVLIDGYCKKLNLQKALSLHSLMLSKGIKSNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
            ILQC  RMQMYSEVVNQFK+FQ +GLFLDKVVYNIVVHALCELGKLEEAIELLE+MTSR
Sbjct: 361 FILQCFLRMQMYSEVVNQFKVFQEKGLFLDKVVYNIVVHALCELGKLEEAIELLEEMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDV+HYTTMIKG F QGKIHEAM+MFENLKKNG+EPD+ITYNVLA GLSRNGLVSKV
Sbjct: 421 QIQMDVIHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYNVLAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
             LL+YMEEHGL+EDPK+ +LVIENLCIGGKVKEATEFFNSLEVKTVDNY+AMINGYCAA
Sbjct: 481 QELLNYMEEHGLREDPKMPNLVIENLCIGGKVKEATEFFNSLEVKTVDNYAAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           N TK AY+LF+NLSK+GVFIKRS+LVRLVS LCME+SS R I+VMKQLP+ N+EA E VY
Sbjct: 541 NSTKAAYKLFVNLSKEGVFIKRSSLVRLVSRLCMENSSFRAIEVMKQLPVMNLEAKEFVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           NKVIASLC+ RNMK AQCLFD LV +GL PDLITYTMMINGYC IN+LR+AYELLCDM+N
Sbjct: 601 NKVIASLCQVRNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKINYLREAYELLCDMRN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGY 720
           RGREPDIF+YT+LLDG FKTRV++ CSSVE+A TS+IF+E KDMK TPDVVYYTV+IDGY
Sbjct: 661 RGREPDIFVYTVLLDGGFKTRVQK-CSSVELALTSSIFNETKDMKITPDVVYYTVLIDGY 720

Query: 721 CKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPK 780
           CKMN LN A VLFEEM+DQGIE D VTYTALLSGCCR+G+ EKAQTL Y+M SKGILPP+
Sbjct: 721 CKMNNLNAAFVLFEEMVDQGIEADAVTYTALLSGCCRNGDKEKAQTLCYEMTSKGILPPE 780

Query: 781 HFSFLLHHDTLKTKKV 797
           +FS+LL HDTL+TKK+
Sbjct: 781 NFSYLLQHDTLETKKI 795

[Close]

BLAST of HG10008123 vs. NCBI nr
Match: KAA0050042.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1349.3 bits (3491), Expect = 0.0e+00
Identity = 670/796 (84.17%), Postives = 733/796 (92.09%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNP KLNK KLKLVKFASTAIAQ N C FSHS+DEQ+TTS NTTL+VQC PS
Sbjct: 1   MNCLLLAVNNPTKLNKLKLKLVKFASTAIAQLNSCFFSHSDDEQTTTSFNTTLNVQCKPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV Q+LESLRREPNIAFSFFRELEE GFQHN+STYAALIRILCSW L RKLE+LF NLI 
Sbjct: 61  KVVQVLESLRREPNIAFSFFRELEERGFQHNVSTYAALIRILCSWRLRRKLETLFLNLIG 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ +FDVLDLLESLNQG V+D SFIRAYDALIKAYV+V+LFDSVVDLLFRL RKGFVPH
Sbjct: 121 SKKMDFDVLDLLESLNQGCVLDASFIRAYDALIKAYVNVNLFDSVVDLLFRLGRKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCN+LLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIG+MEEAIDIFE
Sbjct: 181 IFTCNYLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGNMEEAIDIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMS  G+VPNAFACAAYIE LCTHDCSTSGYQLLQAWRAE+ PIDAYAYSVVIRGFC+EM
Sbjct: 241 EMSGYGMVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAERFPIDAYAYSVVIRGFCDEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAE+VFLDME YGVVPDA TY VLI+GYCKKL LQKALSLHSLMLSKG+KSNCVI+S
Sbjct: 301 KIDEAESVFLDMENYGVVPDAQTYSVLIDGYCKKLNLQKALSLHSLMLSKGIKSNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
            ILQC  RMQMYSEVVNQFK+FQ +GLFLDKVVYNIVVHALCELGKLEEAIELLE+MTSR
Sbjct: 361 FILQCFLRMQMYSEVVNQFKVFQEKGLFLDKVVYNIVVHALCELGKLEEAIELLEEMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDV+HYTTMIKG F QGKIHEAM+MFENLKKNG+EPD+ITYNVLA GLSRNGLVSKV
Sbjct: 421 QIQMDVIHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYNVLAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
             LL+YMEEHGL+EDPK+ +LVIENLCIGGKVKEATEFFNSLEVKTVDNY+AMINGYCAA
Sbjct: 481 QELLNYMEEHGLREDPKMPNLVIENLCIGGKVKEATEFFNSLEVKTVDNYAAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           N TK AY+LF+NLSK+GVFIKRS+LVRLVS LCME+SS R I+VMKQLP+ N+EA E VY
Sbjct: 541 NSTKAAYKLFVNLSKEGVFIKRSSLVRLVSRLCMENSSFRAIEVMKQLPVMNLEAKEFVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           NKVIASLC+ RNMK AQCLFD LV +GL PDLITYTMMINGYC IN+LR+AYELLCDM+N
Sbjct: 601 NKVIASLCQVRNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKINYLREAYELLCDMRN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGY 720
           RGREPDIF+YT+LLDG FKTRV++ CSSVE+A TS+IF+E KDMK TPDVVYYTV+IDGY
Sbjct: 661 RGREPDIFVYTVLLDGGFKTRVQK-CSSVELALTSSIFNETKDMKITPDVVYYTVLIDGY 720

Query: 721 CKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPK 780
           CKMN LN A VLFEEM+DQGIE D VTYTALLSGCCR+G+ EKAQTL Y+M SKGILPP+
Sbjct: 721 CKMNNLNAAFVLFEEMVDQGIEADAVTYTALLSGCCRNGDKEKAQTLCYEMTSKGILPPE 780

Query: 781 HFSFLLHHDTLKTKKV 797
           +FS+LL HDTL+TKK+
Sbjct: 781 NFSYLLQHDTLETKKI 795

[Close]

BLAST of HG10008123 vs. NCBI nr
Match: XP_022987398.1 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Cucurbita maxima] >XP_022987399.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Cucurbita maxima] >XP_022987400.1 pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1341.6 bits (3471), Expect = 0.0e+00
Identity = 677/805 (84.10%), Postives = 727/805 (90.31%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNPIKL++ KLKLVKFASTAIAQ NPCSFSHS+DEQSTT  +TTL VQ NPS
Sbjct: 1   MNCLLLAVNNPIKLSRLKLKLVKFASTAIAQLNPCSFSHSDDEQSTTFFHTTLPVQFNPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV QIL SLRREP IAFSFFRELEE GFQHNISTYAALIRILCSWGLERKLESLF NLI 
Sbjct: 61  KVVQILGSLRREPKIAFSFFRELEERGFQHNISTYAALIRILCSWGLERKLESLFLNLIE 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ EFDVLDLLESLNQGY V GSF RAYDALIKAYVSVSLFDS VDLLFR ERKGFVPH
Sbjct: 121 SKKMEFDVLDLLESLNQGYAVGGSFTRAYDALIKAYVSVSLFDSAVDLLFRSERKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCNFLLNRL EHGKMNMALVVYKQLKRFG  PNDYTYA VIKALCK+G+MEEAI IFE
Sbjct: 181 IFTCNFLLNRLTEHGKMNMALVVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIYIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMSE+GVV +AFA  AYIEGLCTH CS S YQLLQAWR  Q PID YAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVASAFAYTAYIEGLCTHHCSASAYQLLQAWREAQAPIDVYAYFVVIRGFCEEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAENVFL+ME+YGVVPDA TYGVLINGYCKKL LQKALSLHSLMLSKG+K+NCVI+S
Sbjct: 301 KIDEAENVFLEMEQYGVVPDAQTYGVLINGYCKKLKLQKALSLHSLMLSKGIKTNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
           SILQCL RMQM SEVVNQFK+FQG+G+F DKV YNIVVHALCE GKLEEA+ELLEDMTSR
Sbjct: 361 SILQCLLRMQMCSEVVNQFKVFQGKGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDVVHYTTMIKGFFVQGKIHEAM+MFENLKKNGIEPDTITYNVLA GLSRNGLVSKV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMVMFENLKKNGIEPDTITYNVLAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
            GLLDYMEEHGL+EDPKI DLVIENLC+GGKVKEATEFFNSLEVKTV+NYSAMINGYCAA
Sbjct: 481 QGLLDYMEEHGLREDPKILDLVIENLCVGGKVKEATEFFNSLEVKTVENYSAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           NHT DAY+LF+NLSKKGV IK+S L RLVSSLCMEDSSDR IKV+K+LPI +V+AN+IVY
Sbjct: 541 NHTNDAYDLFVNLSKKGVSIKKSTLSRLVSSLCMEDSSDRAIKVIKKLPIMDVKANKIVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           N VI+SLCR  NMK+AQ LFD LV +GLTPDLITYTMMINGYC INFLR+AYELLCDMKN
Sbjct: 601 NNVISSLCRVGNMKRAQSLFDCLVCAGLTPDLITYTMMINGYCKINFLREAYELLCDMKN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSV-------EIAFTSTIFDEMKDMKFTPDVVYY 720
           RGR+PDI IYT+LLDG FKTR++ELCSSV       EIA  STIFDEMKDMK TPD++ Y
Sbjct: 661 RGRKPDIVIYTVLLDGLFKTRLQELCSSVHLRGEKQEIALASTIFDEMKDMKITPDIICY 720

Query: 721 TVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVS 780
           TV+IDGYCKMN L+DAVVLFEEM+DQGIEPDTVTYTALLSGCCRSG+TEKA TL  DM+S
Sbjct: 721 TVLIDGYCKMNNLSDAVVLFEEMVDQGIEPDTVTYTALLSGCCRSGDTEKAVTLMSDMLS 780

Query: 781 KGILPPKHFSFLLHHDTLKTKKVQL 799
           KGILP + FS LLHH+T KTKK++L
Sbjct: 781 KGILPSEQFSTLLHHNTPKTKKMRL 805

[Close]

BLAST of HG10008123 vs. ExPASy Swiss-Prot
Match: O81028 (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g26790 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.2e-151
Identity = 312/785 (39.75%), Postives = 458/785 (58.34%), Query Frame = 0


Query: 24  FASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPSKVAQILESLRREPNIAFSFFREL 83
           +A +A+  PN  S S   ++Q    +N +   Q     + ++L S R +PN+A SF R+L
Sbjct: 27  YAVSALNNPNNLSDS---EQQQVNHLNLSKLTQ---HGLQRLLNSTRDDPNLALSFLRQL 86

Query: 84  EEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIASKRREFDVLDLLESL-NQGYVVD 143
           +E G   N++ YA L+RIL +WGL+ KL+S+   LI ++ R F V+DL+E +  Q     
Sbjct: 87  KEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQAEEKK 146

Query: 144 GSF--IRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPHIFTCNFLLNRLIEHGKMNMA 203
            SF  IR   AL+KAYVS+ +FD   D+LF+ +R   V  I  CNFL+NR+ E GK+ M 
Sbjct: 147 RSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGML 206

Query: 204 LVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFEEMSESGVVPNAFACAAYIEG 263
           + ++KQLK+ G   N+YTYA V+KALC+ G++EEA  +  E        + F    +I G
Sbjct: 207 MTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFING 266

Query: 264 LC-THDCSTSGYQLLQAWRAEQVPID--AYAYSVVIRGFCEEMKIDEAENVFLDMEKYGV 323
           LC T +   +   +L+    + +  D       +V+RGFC EMK+  AE+V ++ME+ G 
Sbjct: 267 LCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGF 326

Query: 324 VPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIISSILQCLFRMQMYSEVVN 383
             D      +I+ YCK + L +AL     ML KG+K NCVI+S ILQC  +M M  E + 
Sbjct: 327 GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALE 386

Query: 384 QFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSRQIQMDVVHYTTMIKGFF 443
           +FK F+   +FLD+V YN+   AL +LG++EEA ELL++M  R I  DV++YTT+I G+ 
Sbjct: 387 KFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 446

Query: 444 VQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKVHGLLDYMEEHGLKEDPK 503
           +QGK+ +A+ + + +  NG+ PD ITYNVL +GL+RNG   +V  + + M+  G K +  
Sbjct: 447 LQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV 506

Query: 504 IRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAANHTKDAYELFINLSKKG 563
              ++IE LC   KVKEA +FF+SLE K  +N ++ + GYC A  +K AY+ F+ L    
Sbjct: 507 TNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYP- 566

Query: 564 VFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVYNKVIASLCRERNMKKAQ 623
             +++S  ++L  SLC+E   ++   V+K++    VE    +  K+I + C+  N+++AQ
Sbjct: 567 --LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQ 626

Query: 624 CLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKNRGREPDIFIYTILLDGQ 683
            LFD +V  GL PDL TYT+MI+ YC +N L+KA  L  DMK RG +PD+  YT+LLD  
Sbjct: 627 VLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRY 686

Query: 684 FK--TRVRELCS---SVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGYCKMNKLNDAVVL 743
            K      E CS    V     S +  E        DVV YTV+ID  CKMN L  A  L
Sbjct: 687 LKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAEL 746

Query: 744 FEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPKHFSFLLHHDTLK 798
           F+ MID G+EPD V YT L+S   R G  + A TL  ++  K  +P + F   +    LK
Sbjct: 747 FDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALK 796

[Close]

BLAST of HG10008123 vs. ExPASy Swiss-Prot
Match: Q9LMH5 (Putative pentatricopeptide repeat-containing protein At1g13800 OS=Arabidopsis thaliana OX=3702 GN=At1g13800 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 7.6e-128
Identity = 273/807 (33.83%), Postives = 433/807 (53.66%), Query Frame = 0


Query: 28  AIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPSKVAQILESLRREPNIAFSFFRELEEWG 87
           A+A+ N  + SHSE  +  T     L  + N   V ++L S++ +P +A SF + +E   
Sbjct: 29  ALARTN-LTISHSEQVKEGTFDYKAL--ELNDIGVLRVLNSMKDDPYLALSFLKRIEGNV 88

Query: 88  FQHNISTYAALIRILCSWGLERKLESLFSNLI--ASKRREFDVLDLLESLNQGYVVDGSF 147
              ++  YA +IRI+C WGL++KL++    L+    + R F V+DLL+++ +        
Sbjct: 89  TLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLL 148

Query: 148 IRAYDALIKAYVSVSLFDSVVDLLFRLERK-GFVPHIFTCNFLLNRLIEHGKMNMALVVY 207
           IR   AL+KAY ++ +FD  +D+ FR     G  P I   NFL++R+I  G+ +M +  +
Sbjct: 149 IRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 208

Query: 208 KQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFEEMSESGVVPNAFACAAYIEGLCTH 267
            +++R G   + +TY  V++AL +    EE   +   +  S           +IEGLC +
Sbjct: 209 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLN 268

Query: 268 DCSTSGYQLLQAWRAEQVPID----AYAYSVVIRGFCEEMKIDEAENVFLDMEKYGVVPD 327
             +   Y LLQ  R   + +D      AY  V+RG C EM+I++AE+V LDMEK+G+ PD
Sbjct: 269 QMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPD 328

Query: 328 ALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIISSILQCLFRMQMYSEVVNQFK 387
              Y  +I G+ K + + KA+ + + ML K  + NCVI+SSILQC  +M  +SE  + FK
Sbjct: 329 VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFK 388

Query: 388 IFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSRQIQMDVVHYTTMIKGFFVQG 447
            F+   + LD+V YN+   AL +LGK+EEAIEL  +MT + I  DV++YTT+I G  +QG
Sbjct: 389 EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQG 448

Query: 448 KIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKVHGLLDYMEEHGLKEDPKIRD 507
           K  +A  +   +   G  PD + YNVLA GL+ NGL  +    L  ME  G+K      +
Sbjct: 449 KCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHN 508

Query: 508 LVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAANHTKDAYELFINLSKKGVFI 567
           +VIE L   G++ +A  F+ SLE K+ +N ++M+ G+CAA     A+E FI L      +
Sbjct: 509 MVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFP---L 568

Query: 568 KRSALVRLVSSLCME-DSSDRDIKVMKQLPIRNVEANEIVYNKVIASLCRERNMKKAQCL 627
            +S    L +SLC E D   +   ++ ++    VE  + +Y K+I + CR  N++KA+  
Sbjct: 569 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 628

Query: 628 FDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKNRGREPDIFIYTILLDGQ-- 687
           F+ LV+  + PDL TYT+MIN YC +N  ++AY L  DMK R  +PD+  Y++LL+    
Sbjct: 629 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 688

Query: 688 ------------------FKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVV-------- 747
                             +   +   C   ++     +F +MK  +  PDVV        
Sbjct: 689 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 748

Query: 748 --------------------YYTVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTAL 779
                               YYTV+ID  CK+  L +A  +F++MI+ G++PD   YTAL
Sbjct: 749 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 808

[Close]

BLAST of HG10008123 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.4e-68
Identity = 160/619 (25.85%), Postives = 301/619 (48.63%), Query Frame = 0


Query: 171 RLERKG---FVPHIFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALC 230
           R+ R G     P + T   L+      G++++       + + G + +   +  ++K LC
Sbjct: 74  RMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLC 133

Query: 231 KIGHMEEAIDI-FEEMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAW---RAEQVP 290
                 +A+DI    M+E G +PN F+    ++GLC  + S    +LL      R    P
Sbjct: 134 ADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSP 193

Query: 291 IDAYAYSVVIRGFCEEMKIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSL 350
            D  +Y+ VI GF +E   D+A + + +M   G++PD +TY  +I   CK   + KA+ +
Sbjct: 194 PDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEV 253

Query: 351 HSLMLSKGVKSNCVIISSILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCE 410
            + M+  GV  +C+  +SIL          E +   K  + +G+  D V Y++++  LC+
Sbjct: 254 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCK 313

Query: 411 LGKLEEAIELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTIT 470
            G+  EA ++ + MT R ++ ++  Y T+++G+  +G + E   + + + +NGI PD   
Sbjct: 314 NGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYV 373

Query: 471 YNVLATGLSRNGLVSKVHGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSL- 530
           +++L    ++ G V +   +   M + GL  +      VI  LC  G+V++A  +F  + 
Sbjct: 374 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433

Query: 531 -EVKTVDN--YSAMINGYCAANHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSD 590
            E  +  N  Y+++I+G C  N  + A EL + +  +G+ +       ++ S C E    
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 493

Query: 591 RDIKVMKQLPIRNVEANEIVYNKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMI 650
              K+ + +    V+ N I YN +I   C    M +A  L   +VS GL P+ +TY+ +I
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 553

Query: 651 NGYCNINFLRKAYELLCDMKNRGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFD 710
           NGYC I+ +  A  L  +M++ G  PDI  Y I+L G F+TR          A    ++ 
Sbjct: 554 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTR--------RTAAAKELYV 613

Query: 711 EMKDMKFTPDVVYYTVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSG 770
            + +     ++  Y +++ G CK    +DA+ +F+ +    ++ +  T+  ++    + G
Sbjct: 614 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 673

Query: 771 NTEKAQTLYYDMVSKGILP 779
             ++A+ L+    S G++P
Sbjct: 674 RNDEAKDLFVAFSSNGLVP 684

[Close]

BLAST of HG10008123 vs. ExPASy Swiss-Prot
Match: Q9LSL9 (Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX=3702 GN=At5g65560 PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.4e-65
Identity = 201/780 (25.77%), Postives = 351/780 (45.00%), Query Frame = 0


Query: 58  NPSKVAQILESLRREPNIAFSFFREL-EEWGFQHNISTYAALIRILCS---WGLERKLES 117
           +PS V+ +  SL  +P  A +F   + +   ++H++ +YA+L+ +L +    G+  K+  
Sbjct: 89  SPSHVSSLF-SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRL 148

Query: 118 LFSNLIASKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLE 177
           L      S      VLDL   +N+    D  F   Y  +I  Y                 
Sbjct: 149 LMIKSCDSVGDALYVLDLCRKMNK----DERFELKYKLIIGCY----------------- 208

Query: 178 RKGFVPHIFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHME 237
                      N LLN L   G ++    VY ++      PN YTY  ++   CK+G++E
Sbjct: 209 -----------NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVE 268

Query: 238 EAIDIFEEMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVI 297
           EA     ++ E+G+ P+ F   + I G C      S +++      +    +  AY+ +I
Sbjct: 269 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 328

Query: 298 RGFCEEMKIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVK 357
            G C   +IDEA ++F+ M+     P   TY VLI   C      +AL+L   M   G+K
Sbjct: 329 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 388

Query: 358 SN----CVIISSIL-QCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLE 417
            N     V+I S+  QC F  +   E++ Q      +GL  + + YN +++  C+ G +E
Sbjct: 389 PNIHTYTVLIDSLCSQCKF--EKARELLGQ---MLEKGLMPNVITYNALINGYCKRGMIE 448

Query: 418 EAIELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLA 477
           +A++++E M SR++  +   Y  +IKG + +  +H+AM +   + +  + PD +TYN L 
Sbjct: 449 DAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 508

Query: 478 TGLSRNGLVSKVHGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVD 537
            G  R+G     + LL  M + GL  D      +I++LC   +V+EA + F+SLE K V+
Sbjct: 509 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 568

Query: 538 ----NYSAMINGYCAANHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDS------- 597
                Y+A+I+GYC A    +A+ +   +  K           L+  LC +         
Sbjct: 569 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 628

Query: 598 SDRDIKV----------------------------MKQLPIRNVEANEIVYNKVIASLCR 657
            ++ +K+                             +Q+     + +   Y   I + CR
Sbjct: 629 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 688

Query: 658 ERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKNRGREPDIFI 717
           E  +  A+ +   +  +G++PDL TY+ +I GY ++     A+++L  M++ G EP    
Sbjct: 689 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 748

Query: 718 YTILLD-------GQFKTRVRELC---SSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDG 777
           +  L+        G+ K    ELC   + +E      + ++M +   TP+   Y  +I G
Sbjct: 749 FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 808

Query: 778 YCKMNKLNDAVVLFEEM-IDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILP 779
            C++  L  A  +F+ M  ++GI P  + + ALLS CC+     +A  +  DM+  G LP
Sbjct: 809 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829

[Close]

BLAST of HG10008123 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 2.0e-64
Identity = 189/820 (23.05%), Postives = 348/820 (42.44%), Query Frame = 0


Query: 62  VAQILESLRREPNIAFSFFRELE-EWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 121
           V +IL     +P +   FF  L    GF H+ +++  LI  L    L     SL   L+ 
Sbjct: 73  VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132

Query: 122 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYV-SVSLFDSVVDLLFRLERKGFVP 181
              +  DV ++L S  +   +  S   ++D LI+ YV S  + D V+     + +   +P
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSS--SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLP 192

Query: 182 HIFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCK----------I 241
            + T + LL+ L++     +A+ ++  +   G +P+ Y Y  VI++LC+          I
Sbjct: 193 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 252

Query: 242 GHME-------------------------EAIDIFEEMSESGVVPNAFACAAYIEGLCTH 301
            HME                         EA+ I ++++   + P+       + GLC  
Sbjct: 253 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 312

Query: 302 DCSTSGYQLL-----------------------QAWRAEQ------------VPIDAYAY 361
                G +++                       +  + E+            V  + + Y
Sbjct: 313 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 372

Query: 362 SVVIRGFCEEMKIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLS 421
           + +I   C+  K  EAE +F  M K G+ P+ +TY +LI+ +C++  L  ALS    M+ 
Sbjct: 373 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 432

Query: 422 KGVKSNCVIISSILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEE 481
            G+K +    +S++    +    S           + L    V Y  ++   C  GK+ +
Sbjct: 433 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 492

Query: 482 AIELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLAT 541
           A+ L  +MT + I   +  +TT++ G F  G I +A+ +F  + +  ++P+ +TYNV+  
Sbjct: 493 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 552

Query: 542 GLSRNGLVSKVHGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVD- 601
           G    G +SK    L  M E G+  D      +I  LC+ G+  EA  F + L     + 
Sbjct: 553 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 612

Query: 602 ---NYSAMINGYCAANHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVM 661
               Y+ +++G+C     ++A  +   + ++GV +       L+              ++
Sbjct: 613 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 672

Query: 662 KQLPIRNVEANEIVYNKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNI 721
           K++  R ++ ++++Y  +I +  +  + K+A  ++D +++ G  P+ +TYT +ING C  
Sbjct: 673 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 732

Query: 722 NFLRKAYELLCDMKNRGREPDIFIYTILLD---------------------------GQF 779
            F+ +A  L   M+     P+   Y   LD                             +
Sbjct: 733 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 792

[Close]

BLAST of HG10008123 vs. ExPASy TrEMBL
Match: A0A1S4DV07 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487387 PE=4 SV=1)

HSP 1 Score: 1350.9 bits (3495), Expect = 0.0e+00
Identity = 672/796 (84.42%), Postives = 733/796 (92.09%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNP KLNK KLKLVKFASTAIAQ N C FSHS+DEQ+TTS NTTL+VQC PS
Sbjct: 1   MNCLLLAVNNPTKLNKLKLKLVKFASTAIAQLNSCFFSHSDDEQTTTSFNTTLNVQCKPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV Q+LESLRREPNIAFSFFRELEE GFQHNISTYAALIRILCSW L RKLE+LF NLI 
Sbjct: 61  KVVQVLESLRREPNIAFSFFRELEERGFQHNISTYAALIRILCSWRLRRKLETLFLNLIG 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ +FDVLDLLESLNQG V+D SFIRAYDALIKAYVSV+LFDSVVDLLFRL RKGFVPH
Sbjct: 121 SKKMDFDVLDLLESLNQGCVLDASFIRAYDALIKAYVSVNLFDSVVDLLFRLGRKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCN+LLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIG+MEEAIDIFE
Sbjct: 181 IFTCNYLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGNMEEAIDIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMS  G+VPNAFACAAYIE LCTHDCSTSGYQLLQAWRAE+ PIDAYAYSVVIRGFC+EM
Sbjct: 241 EMSGYGMVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAERFPIDAYAYSVVIRGFCDEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAE+VFLDME YGVVPDA TY VLI+GYCKKL LQKALSLHSLMLSKG+KSNCVI+S
Sbjct: 301 KIDEAESVFLDMENYGVVPDAQTYSVLIDGYCKKLNLQKALSLHSLMLSKGIKSNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
            ILQC  RMQMYSEVVNQFK+FQ +GLFLDKVVYNIVVHALCELGKLEEAIELLE+MTSR
Sbjct: 361 FILQCFLRMQMYSEVVNQFKVFQEKGLFLDKVVYNIVVHALCELGKLEEAIELLEEMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDV+HYTTMIKG F QGKIHEAM+MFENLKKNG+EPD+ITYNVLA GLSRNGLVSKV
Sbjct: 421 QIQMDVIHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYNVLAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
             LL+YMEEHGL+EDPK+ +LVIENLCIGGKVKEATEFFNSLEVKTVDNY+AMINGYCAA
Sbjct: 481 QELLNYMEEHGLREDPKMPNLVIENLCIGGKVKEATEFFNSLEVKTVDNYAAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           N TK AY+LF+NLSK+GVFIKRS+LVRLVS LCME+SS R I+VMKQLP+ N+EA E VY
Sbjct: 541 NSTKAAYKLFVNLSKEGVFIKRSSLVRLVSRLCMENSSFRAIEVMKQLPVMNLEAKEFVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           NKVIASLC+ RNMK AQCLFD LV +GL PDLITYTMMINGYC IN+LR+AYELLCDM+N
Sbjct: 601 NKVIASLCQVRNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKINYLREAYELLCDMRN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGY 720
           RGREPDIF+YT+LLDG FKTRV++ CSSVE+A TS+IF+E KDMK TPDVVYYTV+IDGY
Sbjct: 661 RGREPDIFVYTVLLDGGFKTRVQK-CSSVELALTSSIFNETKDMKITPDVVYYTVLIDGY 720

Query: 721 CKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPK 780
           CKMN LN A VLFEEM+DQGIE D VTYTALLSGCCR+G+ EKAQTL Y+M SKGILPP+
Sbjct: 721 CKMNNLNAAFVLFEEMVDQGIEADAVTYTALLSGCCRNGDKEKAQTLCYEMTSKGILPPE 780

Query: 781 HFSFLLHHDTLKTKKV 797
           +FS+LL HDTL+TKK+
Sbjct: 781 NFSYLLQHDTLETKKI 795

[Close]

BLAST of HG10008123 vs. ExPASy TrEMBL
Match: A0A5A7U2I6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00200 PE=4 SV=1)

HSP 1 Score: 1349.3 bits (3491), Expect = 0.0e+00
Identity = 670/796 (84.17%), Postives = 733/796 (92.09%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNP KLNK KLKLVKFASTAIAQ N C FSHS+DEQ+TTS NTTL+VQC PS
Sbjct: 1   MNCLLLAVNNPTKLNKLKLKLVKFASTAIAQLNSCFFSHSDDEQTTTSFNTTLNVQCKPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV Q+LESLRREPNIAFSFFRELEE GFQHN+STYAALIRILCSW L RKLE+LF NLI 
Sbjct: 61  KVVQVLESLRREPNIAFSFFRELEERGFQHNVSTYAALIRILCSWRLRRKLETLFLNLIG 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ +FDVLDLLESLNQG V+D SFIRAYDALIKAYV+V+LFDSVVDLLFRL RKGFVPH
Sbjct: 121 SKKMDFDVLDLLESLNQGCVLDASFIRAYDALIKAYVNVNLFDSVVDLLFRLGRKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCN+LLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIG+MEEAIDIFE
Sbjct: 181 IFTCNYLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGNMEEAIDIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMS  G+VPNAFACAAYIE LCTHDCSTSGYQLLQAWRAE+ PIDAYAYSVVIRGFC+EM
Sbjct: 241 EMSGYGMVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAERFPIDAYAYSVVIRGFCDEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAE+VFLDME YGVVPDA TY VLI+GYCKKL LQKALSLHSLMLSKG+KSNCVI+S
Sbjct: 301 KIDEAESVFLDMENYGVVPDAQTYSVLIDGYCKKLNLQKALSLHSLMLSKGIKSNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
            ILQC  RMQMYSEVVNQFK+FQ +GLFLDKVVYNIVVHALCELGKLEEAIELLE+MTSR
Sbjct: 361 FILQCFLRMQMYSEVVNQFKVFQEKGLFLDKVVYNIVVHALCELGKLEEAIELLEEMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDV+HYTTMIKG F QGKIHEAM+MFENLKKNG+EPD+ITYNVLA GLSRNGLVSKV
Sbjct: 421 QIQMDVIHYTTMIKGLFAQGKIHEAMMMFENLKKNGVEPDSITYNVLAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
             LL+YMEEHGL+EDPK+ +LVIENLCIGGKVKEATEFFNSLEVKTVDNY+AMINGYCAA
Sbjct: 481 QELLNYMEEHGLREDPKMPNLVIENLCIGGKVKEATEFFNSLEVKTVDNYAAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           N TK AY+LF+NLSK+GVFIKRS+LVRLVS LCME+SS R I+VMKQLP+ N+EA E VY
Sbjct: 541 NSTKAAYKLFVNLSKEGVFIKRSSLVRLVSRLCMENSSFRAIEVMKQLPVMNLEAKEFVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           NKVIASLC+ RNMK AQCLFD LV +GL PDLITYTMMINGYC IN+LR+AYELLCDM+N
Sbjct: 601 NKVIASLCQVRNMKMAQCLFDCLVRAGLIPDLITYTMMINGYCKINYLREAYELLCDMRN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGY 720
           RGREPDIF+YT+LLDG FKTRV++ CSSVE+A TS+IF+E KDMK TPDVVYYTV+IDGY
Sbjct: 661 RGREPDIFVYTVLLDGGFKTRVQK-CSSVELALTSSIFNETKDMKITPDVVYYTVLIDGY 720

Query: 721 CKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPK 780
           CKMN LN A VLFEEM+DQGIE D VTYTALLSGCCR+G+ EKAQTL Y+M SKGILPP+
Sbjct: 721 CKMNNLNAAFVLFEEMVDQGIEADAVTYTALLSGCCRNGDKEKAQTLCYEMTSKGILPPE 780

Query: 781 HFSFLLHHDTLKTKKV 797
           +FS+LL HDTL+TKK+
Sbjct: 781 NFSYLLQHDTLETKKI 795

[Close]

BLAST of HG10008123 vs. ExPASy TrEMBL
Match: A0A6J1JGR8 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111484960 PE=4 SV=1)

HSP 1 Score: 1341.6 bits (3471), Expect = 0.0e+00
Identity = 677/805 (84.10%), Postives = 727/805 (90.31%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNPIKL++ KLKLVKFASTAIAQ NPCSFSHS+DEQSTT  +TTL VQ NPS
Sbjct: 1   MNCLLLAVNNPIKLSRLKLKLVKFASTAIAQLNPCSFSHSDDEQSTTFFHTTLPVQFNPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV QIL SLRREP IAFSFFRELEE GFQHNISTYAALIRILCSWGLERKLESLF NLI 
Sbjct: 61  KVVQILGSLRREPKIAFSFFRELEERGFQHNISTYAALIRILCSWGLERKLESLFLNLIE 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ EFDVLDLLESLNQGY V GSF RAYDALIKAYVSVSLFDS VDLLFR ERKGFVPH
Sbjct: 121 SKKMEFDVLDLLESLNQGYAVGGSFTRAYDALIKAYVSVSLFDSAVDLLFRSERKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCNFLLNRL EHGKMNMALVVYKQLKRFG  PNDYTYA VIKALCK+G+MEEAI IFE
Sbjct: 181 IFTCNFLLNRLTEHGKMNMALVVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIYIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMSE+GVV +AFA  AYIEGLCTH CS S YQLLQAWR  Q PID YAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVASAFAYTAYIEGLCTHHCSASAYQLLQAWREAQAPIDVYAYFVVIRGFCEEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAENVFL+ME+YGVVPDA TYGVLINGYCKKL LQKALSLHSLMLSKG+K+NCVI+S
Sbjct: 301 KIDEAENVFLEMEQYGVVPDAQTYGVLINGYCKKLKLQKALSLHSLMLSKGIKTNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
           SILQCL RMQM SEVVNQFK+FQG+G+F DKV YNIVVHALCE GKLEEA+ELLEDMTSR
Sbjct: 361 SILQCLLRMQMCSEVVNQFKVFQGKGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDVVHYTTMIKGFFVQGKIHEAM+MFENLKKNGIEPDTITYNVLA GLSRNGLVSKV
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMVMFENLKKNGIEPDTITYNVLAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
            GLLDYMEEHGL+EDPKI DLVIENLC+GGKVKEATEFFNSLEVKTV+NYSAMINGYCAA
Sbjct: 481 QGLLDYMEEHGLREDPKILDLVIENLCVGGKVKEATEFFNSLEVKTVENYSAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           NHT DAY+LF+NLSKKGV IK+S L RLVSSLCMEDSSDR IKV+K+LPI +V+AN+IVY
Sbjct: 541 NHTNDAYDLFVNLSKKGVSIKKSTLSRLVSSLCMEDSSDRAIKVIKKLPIMDVKANKIVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           N VI+SLCR  NMK+AQ LFD LV +GLTPDLITYTMMINGYC INFLR+AYELLCDMKN
Sbjct: 601 NNVISSLCRVGNMKRAQSLFDCLVCAGLTPDLITYTMMINGYCKINFLREAYELLCDMKN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSV-------EIAFTSTIFDEMKDMKFTPDVVYY 720
           RGR+PDI IYT+LLDG FKTR++ELCSSV       EIA  STIFDEMKDMK TPD++ Y
Sbjct: 661 RGRKPDIVIYTVLLDGLFKTRLQELCSSVHLRGEKQEIALASTIFDEMKDMKITPDIICY 720

Query: 721 TVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVS 780
           TV+IDGYCKMN L+DAVVLFEEM+DQGIEPDTVTYTALLSGCCRSG+TEKA TL  DM+S
Sbjct: 721 TVLIDGYCKMNNLSDAVVLFEEMVDQGIEPDTVTYTALLSGCCRSGDTEKAVTLMSDMLS 780

Query: 781 KGILPPKHFSFLLHHDTLKTKKVQL 799
           KGILP + FS LLHH+T KTKK++L
Sbjct: 781 KGILPSEQFSTLLHHNTPKTKKMRL 805

[Close]

BLAST of HG10008123 vs. ExPASy TrEMBL
Match: A0A6J1E1Q9 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111430036 PE=4 SV=1)

HSP 1 Score: 1315.4 bits (3403), Expect = 0.0e+00
Identity = 666/805 (82.73%), Postives = 721/805 (89.57%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLLA+NNPI     KLKLVKFASTAIAQ NPCSFSHS+ EQSTT  +TTL VQ NPS
Sbjct: 1   MNCLLLAVNNPI-----KLKLVKFASTAIAQLNPCSFSHSDGEQSTTFFHTTLPVQFNPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV QIL SLRREPNIAFSFFRELE+ GFQHNISTYAALIRILCSWGLERKLESLF NLI 
Sbjct: 61  KVVQILGSLRREPNIAFSFFRELEDRGFQHNISTYAALIRILCSWGLERKLESLFLNLID 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           SK+ EFDVLDLLESLNQGY V+GSF RAYDALIKAYVSVSLFDS VDLLFR  RKGFVPH
Sbjct: 121 SKKMEFDVLDLLESLNQGYAVNGSFTRAYDALIKAYVSVSLFDSAVDLLFRSGRKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCN+LLNRLI+HGKMN+ALVVYKQLKRFG  PNDYTYA VIKALCK+G+MEEAI IFE
Sbjct: 181 IFTCNYLLNRLIKHGKMNIALVVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIYIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMSE+GVV +AFA  AYIEGLCTH CS S YQLLQAWRA Q PID YAYSVVI GFCEEM
Sbjct: 241 EMSEAGVVASAFAYTAYIEGLCTHHCSASAYQLLQAWRAAQAPIDVYAYSVVIHGFCEEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           KIDEAENVFL+MEKYGVVP+A TYGVLINGYCKKL LQKALSLHSLMLSKG+K+NCVI+S
Sbjct: 301 KIDEAENVFLEMEKYGVVPNAQTYGVLINGYCKKLKLQKALSLHSLMLSKGIKTNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
           SILQCL RMQM SEVVNQFK+FQG+G++ DKV YNIV+HALCE GKLEEA+ELLEDMTSR
Sbjct: 361 SILQCLLRMQMCSEVVNQFKVFQGKGVYFDKVAYNIVLHALCEQGKLEEAMELLEDMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDVVHYTTMIKGF VQGKIHEAM+MFENLKKNGIEPDTITY+VLA GLSRNGLVSKV
Sbjct: 421 QIQMDVVHYTTMIKGFLVQGKIHEAMVMFENLKKNGIEPDTITYDVLAAGLSRNGLVSKV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
            GLLDYMEEHGL+EDPKI +LVIENLC+GGKVKEATEFFNSLEVKTVDNYSAMINGYCAA
Sbjct: 481 QGLLDYMEEHGLREDPKILNLVIENLCVGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           NHT DAY+LF+NLSKKGV IK+S L RLVSSLCMEDSS R IKV+K+LPI +VEANEIVY
Sbjct: 541 NHTNDAYDLFVNLSKKGVSIKKSTLSRLVSSLCMEDSSGRAIKVIKKLPIMDVEANEIVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           N VI+SLCR  NMK+AQ LFD LV +GLTPDLITYTMMI GYC INFLR+AY LLCDMKN
Sbjct: 601 NNVISSLCRVGNMKRAQSLFDCLVCAGLTPDLITYTMMIKGYCKINFLREAYLLLCDMKN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSV-------EIAFTSTIFDEMKDMKFTPDVVYY 720
           RGR+PDI IYT+LLDG FKTR++E CSSV       EIAF STIFDEMKDMK TPD++ Y
Sbjct: 661 RGRKPDIVIYTVLLDGLFKTRLQEFCSSVDLRGEKQEIAFASTIFDEMKDMKITPDIICY 720

Query: 721 TVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVS 780
           TV+IDGYCKMN LNDAVVLFEEM+DQGIEPD VTYTALLSGCCRSG+T+KA TL  DM+S
Sbjct: 721 TVLIDGYCKMNNLNDAVVLFEEMVDQGIEPDIVTYTALLSGCCRSGDTKKAATLMSDMLS 780

Query: 781 KGILPPKHFSFLLHHDTLKTKKVQL 799
           KGILP + FS LLHH++LKTKK++L
Sbjct: 781 KGILPSEQFSSLLHHNSLKTKKMRL 800

[Close]

BLAST of HG10008123 vs. ExPASy TrEMBL
Match: A0A6J1EVM2 (pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438390 PE=4 SV=1)

HSP 1 Score: 1297.0 bits (3355), Expect = 0.0e+00
Identity = 648/789 (82.13%), Postives = 705/789 (89.35%), Query Frame = 0


Query: 1   MNCLLLAINNPIKLNKFKLKLVKFASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPS 60
           MNCLLL +NNPIKLNK KLKLVKFASTAIA+ N CSFS S+DEQ T S+NTT H+Q NPS
Sbjct: 1   MNCLLLTVNNPIKLNKVKLKLVKFASTAIARLNQCSFSQSDDEQITISLNTTSHIQFNPS 60

Query: 61  KVAQILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 120
           KV QILESLRREPN AFSFF +LEE GF HNISTYAALIRILCSWGLERKL+SLF NLI 
Sbjct: 61  KVIQILESLRREPNSAFSFFHKLEERGFCHNISTYAALIRILCSWGLERKLDSLFLNLIG 120

Query: 121 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPH 180
           S++ EFDVLDLLESLNQGYV+DGSFIRAYD+LIKAYVSVSLFDS VDLLFR ERKGFVPH
Sbjct: 121 SEKTEFDVLDLLESLNQGYVMDGSFIRAYDSLIKAYVSVSLFDSAVDLLFRSERKGFVPH 180

Query: 181 IFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFE 240
           IFTCNFLLNRLIEHGK+NMAL VYKQLKRFG  PNDYTYA VIKALCK+G+MEEAIDIFE
Sbjct: 181 IFTCNFLLNRLIEHGKLNMALTVYKQLKRFGFHPNDYTYAIVIKALCKMGNMEEAIDIFE 240

Query: 241 EMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCEEM 300
           EMSE+GVVPNAFAC AYIEGLCTH CS  GYQLLQ WRA Q PID YAY VVIRGFCEEM
Sbjct: 241 EMSEAGVVPNAFACTAYIEGLCTHRCSAYGYQLLQDWRAAQAPIDVYAYFVVIRGFCEEM 300

Query: 301 KIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIIS 360
           ++++AENVFLDMEKYGVVP+A TYGVLINGYCK L LQKALSLHS MLSKG+K+NCVI+S
Sbjct: 301 EVNKAENVFLDMEKYGVVPNAQTYGVLINGYCKMLKLQKALSLHSFMLSKGIKTNCVIVS 360

Query: 361 SILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSR 420
           SILQCL RMQMYSEVVNQFK+FQ EG+F DKV YNIVVHALCE GKLEEA+ELLEDMTSR
Sbjct: 361 SILQCLIRMQMYSEVVNQFKVFQDEGVFFDKVAYNIVVHALCEQGKLEEAMELLEDMTSR 420

Query: 421 QIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKV 480
           QIQMDVVHYTTMIKGFFVQGKI+EAM MFENLKKNGIEPDTITYNVLA GLSRNGLVS+V
Sbjct: 421 QIQMDVVHYTTMIKGFFVQGKIYEAMTMFENLKKNGIEPDTITYNVLAAGLSRNGLVSEV 480

Query: 481 HGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAA 540
             LLDYM+EHGL+EDPKI +L+IENLCIGGKVKEATE FNSLEVKTVDNYSAMINGYCAA
Sbjct: 481 KNLLDYMDEHGLREDPKISNLIIENLCIGGKVKEATEIFNSLEVKTVDNYSAMINGYCAA 540

Query: 541 NHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVY 600
           N TKDAYELF+NLSKKGV +K+S+L RLVSSLCMEDS+DR IKV+K+L I NVEANEIVY
Sbjct: 541 NRTKDAYELFVNLSKKGVLLKKSSLFRLVSSLCMEDSNDRAIKVIKRLSIINVEANEIVY 600

Query: 601 NKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKN 660
           NKVIASLCR  NMK AQCLFD L+ +GLTPDL TYTMMINGYC INFLR+AYELLCDMKN
Sbjct: 601 NKVIASLCRAGNMKMAQCLFDCLICAGLTPDLKTYTMMINGYCKINFLREAYELLCDMKN 660

Query: 661 RGREPDIFIYTILLDGQFKTRVRELCSSV-------EIAFTSTIFDEMKDMKFTPDVVYY 720
           RGR+PDIFIYT+LLDGQFKTR+R LCS+V       E AFTS IFDEM+DMK TPDV+ Y
Sbjct: 661 RGRKPDIFIYTVLLDGQFKTRLRGLCSAVDLRGAKQETAFTSRIFDEMEDMKITPDVICY 720

Query: 721 TVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVS 780
           TV+IDGYCKMN LNDA+VL E+M+DQGI PDTVTYT L+SG CRSG+ EKA  L+ DM+S
Sbjct: 721 TVLIDGYCKMNNLNDAIVLLEKMVDQGIMPDTVTYTTLVSGFCRSGDVEKAVALFDDMLS 780

Query: 781 KGILPPKHF 783
           KG+LP   F
Sbjct: 781 KGVLPDAFF 789

[Close]

BLAST of HG10008123 vs. TAIR 10
Match: AT2G26790.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 537.7 bits (1384), Expect = 1.6e-152
Identity = 312/785 (39.75%), Postives = 458/785 (58.34%), Query Frame = 0


Query: 24  FASTAIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPSKVAQILESLRREPNIAFSFFREL 83
           +A +A+  PN  S S   ++Q    +N +   Q     + ++L S R +PN+A SF R+L
Sbjct: 27  YAVSALNNPNNLSDS---EQQQVNHLNLSKLTQ---HGLQRLLNSTRDDPNLALSFLRQL 86

Query: 84  EEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIASKRREFDVLDLLESL-NQGYVVD 143
           +E G   N++ YA L+RIL +WGL+ KL+S+   LI ++ R F V+DL+E +  Q     
Sbjct: 87  KEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVIGEQAEEKK 146

Query: 144 GSF--IRAYDALIKAYVSVSLFDSVVDLLFRLERKGFVPHIFTCNFLLNRLIEHGKMNMA 203
            SF  IR   AL+KAYVS+ +FD   D+LF+ +R   V  I  CNFL+NR+ E GK+ M 
Sbjct: 147 RSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGML 206

Query: 204 LVVYKQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFEEMSESGVVPNAFACAAYIEG 263
           + ++KQLK+ G   N+YTYA V+KALC+ G++EEA  +  E        + F    +I G
Sbjct: 207 MTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE------SVFGYKTFING 266

Query: 264 LC-THDCSTSGYQLLQAWRAEQVPID--AYAYSVVIRGFCEEMKIDEAENVFLDMEKYGV 323
           LC T +   +   +L+    + +  D       +V+RGFC EMK+  AE+V ++ME+ G 
Sbjct: 267 LCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGF 326

Query: 324 VPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIISSILQCLFRMQMYSEVVN 383
             D      +I+ YCK + L +AL     ML KG+K NCVI+S ILQC  +M M  E + 
Sbjct: 327 GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALE 386

Query: 384 QFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSRQIQMDVVHYTTMIKGFF 443
           +FK F+   +FLD+V YN+   AL +LG++EEA ELL++M  R I  DV++YTT+I G+ 
Sbjct: 387 KFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 446

Query: 444 VQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKVHGLLDYMEEHGLKEDPK 503
           +QGK+ +A+ + + +  NG+ PD ITYNVL +GL+RNG   +V  + + M+  G K +  
Sbjct: 447 LQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV 506

Query: 504 IRDLVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAANHTKDAYELFINLSKKG 563
              ++IE LC   KVKEA +FF+SLE K  +N ++ + GYC A  +K AY+ F+ L    
Sbjct: 507 TNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYP- 566

Query: 564 VFIKRSALVRLVSSLCMEDSSDRDIKVMKQLPIRNVEANEIVYNKVIASLCRERNMKKAQ 623
             +++S  ++L  SLC+E   ++   V+K++    VE    +  K+I + C+  N+++AQ
Sbjct: 567 --LRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQ 626

Query: 624 CLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKNRGREPDIFIYTILLDGQ 683
            LFD +V  GL PDL TYT+MI+ YC +N L+KA  L  DMK RG +PD+  YT+LLD  
Sbjct: 627 VLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRY 686

Query: 684 FK--TRVRELCS---SVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDGYCKMNKLNDAVVL 743
            K      E CS    V     S +  E        DVV YTV+ID  CKMN L  A  L
Sbjct: 687 LKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAEL 746

Query: 744 FEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILPPKHFSFLLHHDTLK 798
           F+ MID G+EPD V YT L+S   R G  + A TL  ++  K  +P + F   +    LK
Sbjct: 747 FDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALK 796

[Close]

BLAST of HG10008123 vs. TAIR 10
Match: AT1G13800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 459.5 bits (1181), Expect = 5.4e-129
Identity = 273/807 (33.83%), Postives = 433/807 (53.66%), Query Frame = 0


Query: 28  AIAQPNPCSFSHSEDEQSTTSINTTLHVQCNPSKVAQILESLRREPNIAFSFFRELEEWG 87
           A+A+ N  + SHSE  +  T     L  + N   V ++L S++ +P +A SF + +E   
Sbjct: 29  ALARTN-LTISHSEQVKEGTFDYKAL--ELNDIGVLRVLNSMKDDPYLALSFLKRIEGNV 88

Query: 88  FQHNISTYAALIRILCSWGLERKLESLFSNLI--ASKRREFDVLDLLESLNQGYVVDGSF 147
              ++  YA +IRI+C WGL++KL++    L+    + R F V+DLL+++ +        
Sbjct: 89  TLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLL 148

Query: 148 IRAYDALIKAYVSVSLFDSVVDLLFRLERK-GFVPHIFTCNFLLNRLIEHGKMNMALVVY 207
           IR   AL+KAY ++ +FD  +D+ FR     G  P I   NFL++R+I  G+ +M +  +
Sbjct: 149 IRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 208

Query: 208 KQLKRFGCQPNDYTYATVIKALCKIGHMEEAIDIFEEMSESGVVPNAFACAAYIEGLCTH 267
            +++R G   + +TY  V++AL +    EE   +   +  S           +IEGLC +
Sbjct: 209 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLN 268

Query: 268 DCSTSGYQLLQAWRAEQVPID----AYAYSVVIRGFCEEMKIDEAENVFLDMEKYGVVPD 327
             +   Y LLQ  R   + +D      AY  V+RG C EM+I++AE+V LDMEK+G+ PD
Sbjct: 269 QMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPD 328

Query: 328 ALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVIISSILQCLFRMQMYSEVVNQFK 387
              Y  +I G+ K + + KA+ + + ML K  + NCVI+SSILQC  +M  +SE  + FK
Sbjct: 329 VYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFK 388

Query: 388 IFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMTSRQIQMDVVHYTTMIKGFFVQG 447
            F+   + LD+V YN+   AL +LGK+EEAIEL  +MT + I  DV++YTT+I G  +QG
Sbjct: 389 EFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQG 448

Query: 448 KIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVSKVHGLLDYMEEHGLKEDPKIRD 507
           K  +A  +   +   G  PD + YNVLA GL+ NGL  +    L  ME  G+K      +
Sbjct: 449 KCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHN 508

Query: 508 LVIENLCIGGKVKEATEFFNSLEVKTVDNYSAMINGYCAANHTKDAYELFINLSKKGVFI 567
           +VIE L   G++ +A  F+ SLE K+ +N ++M+ G+CAA     A+E FI L      +
Sbjct: 509 MVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFP---L 568

Query: 568 KRSALVRLVSSLCME-DSSDRDIKVMKQLPIRNVEANEIVYNKVIASLCRERNMKKAQCL 627
            +S    L +SLC E D   +   ++ ++    VE  + +Y K+I + CR  N++KA+  
Sbjct: 569 PKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF 628

Query: 628 FDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKNRGREPDIFIYTILLDGQ-- 687
           F+ LV+  + PDL TYT+MIN YC +N  ++AY L  DMK R  +PD+  Y++LL+    
Sbjct: 629 FEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE 688

Query: 688 ------------------FKTRVRELCSSVEIAFTSTIFDEMKDMKFTPDVV-------- 747
                             +   +   C   ++     +F +MK  +  PDVV        
Sbjct: 689 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 748

Query: 748 --------------------YYTVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTAL 779
                               YYTV+ID  CK+  L +A  +F++MI+ G++PD   YTAL
Sbjct: 749 KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTAL 808

[Close]

BLAST of HG10008123 vs. TAIR 10
Match: AT5G65560.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 3.8e-66
Identity = 201/780 (25.77%), Postives = 351/780 (45.00%), Query Frame = 0


Query: 58  NPSKVAQILESLRREPNIAFSFFREL-EEWGFQHNISTYAALIRILCS---WGLERKLES 117
           +PS V+ +  SL  +P  A +F   + +   ++H++ +YA+L+ +L +    G+  K+  
Sbjct: 89  SPSHVSSLF-SLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRL 148

Query: 118 LFSNLIASKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYVSVSLFDSVVDLLFRLE 177
           L      S      VLDL   +N+    D  F   Y  +I  Y                 
Sbjct: 149 LMIKSCDSVGDALYVLDLCRKMNK----DERFELKYKLIIGCY----------------- 208

Query: 178 RKGFVPHIFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCKIGHME 237
                      N LLN L   G ++    VY ++      PN YTY  ++   CK+G++E
Sbjct: 209 -----------NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVE 268

Query: 238 EAIDIFEEMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVI 297
           EA     ++ E+G+ P+ F   + I G C      S +++      +    +  AY+ +I
Sbjct: 269 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 328

Query: 298 RGFCEEMKIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVK 357
            G C   +IDEA ++F+ M+     P   TY VLI   C      +AL+L   M   G+K
Sbjct: 329 HGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK 388

Query: 358 SN----CVIISSIL-QCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLE 417
            N     V+I S+  QC F  +   E++ Q      +GL  + + YN +++  C+ G +E
Sbjct: 389 PNIHTYTVLIDSLCSQCKF--EKARELLGQ---MLEKGLMPNVITYNALINGYCKRGMIE 448

Query: 418 EAIELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLA 477
           +A++++E M SR++  +   Y  +IKG + +  +H+AM +   + +  + PD +TYN L 
Sbjct: 449 DAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 508

Query: 478 TGLSRNGLVSKVHGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVD 537
            G  R+G     + LL  M + GL  D      +I++LC   +V+EA + F+SLE K V+
Sbjct: 509 DGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVN 568

Query: 538 ----NYSAMINGYCAANHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDS------- 597
                Y+A+I+GYC A    +A+ +   +  K           L+  LC +         
Sbjct: 569 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 628

Query: 598 SDRDIKV----------------------------MKQLPIRNVEANEIVYNKVIASLCR 657
            ++ +K+                             +Q+     + +   Y   I + CR
Sbjct: 629 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR 688

Query: 658 ERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINFLRKAYELLCDMKNRGREPDIFI 717
           E  +  A+ +   +  +G++PDL TY+ +I GY ++     A+++L  M++ G EP    
Sbjct: 689 EGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 748

Query: 718 YTILLD-------GQFKTRVRELC---SSVEIAFTSTIFDEMKDMKFTPDVVYYTVMIDG 777
           +  L+        G+ K    ELC   + +E      + ++M +   TP+   Y  +I G
Sbjct: 749 FLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILG 808

Query: 778 YCKMNKLNDAVVLFEEM-IDQGIEPDTVTYTALLSGCCRSGNTEKAQTLYYDMVSKGILP 779
            C++  L  A  +F+ M  ++GI P  + + ALLS CC+     +A  +  DM+  G LP
Sbjct: 809 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829

[Close]

BLAST of HG10008123 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 1.5e-65
Identity = 189/820 (23.05%), Postives = 348/820 (42.44%), Query Frame = 0


Query: 62  VAQILESLRREPNIAFSFFRELE-EWGFQHNISTYAALIRILCSWGLERKLESLFSNLIA 121
           V +IL     +P +   FF  L    GF H+ +++  LI  L    L     SL   L+ 
Sbjct: 73  VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132

Query: 122 SKRREFDVLDLLESLNQGYVVDGSFIRAYDALIKAYV-SVSLFDSVVDLLFRLERKGFVP 181
              +  DV ++L S  +   +  S   ++D LI+ YV S  + D V+     + +   +P
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSS--SSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLP 192

Query: 182 HIFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYTYATVIKALCK----------I 241
            + T + LL+ L++     +A+ ++  +   G +P+ Y Y  VI++LC+          I
Sbjct: 193 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 252

Query: 242 GHME-------------------------EAIDIFEEMSESGVVPNAFACAAYIEGLCTH 301
            HME                         EA+ I ++++   + P+       + GLC  
Sbjct: 253 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 312

Query: 302 DCSTSGYQLL-----------------------QAWRAEQ------------VPIDAYAY 361
                G +++                       +  + E+            V  + + Y
Sbjct: 313 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 372

Query: 362 SVVIRGFCEEMKIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLS 421
           + +I   C+  K  EAE +F  M K G+ P+ +TY +LI+ +C++  L  ALS    M+ 
Sbjct: 373 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 432

Query: 422 KGVKSNCVIISSILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEE 481
            G+K +    +S++    +    S           + L    V Y  ++   C  GK+ +
Sbjct: 433 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 492

Query: 482 AIELLEDMTSRQIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLAT 541
           A+ L  +MT + I   +  +TT++ G F  G I +A+ +F  + +  ++P+ +TYNV+  
Sbjct: 493 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 552

Query: 542 GLSRNGLVSKVHGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEVKTVD- 601
           G    G +SK    L  M E G+  D      +I  LC+ G+  EA  F + L     + 
Sbjct: 553 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 612

Query: 602 ---NYSAMINGYCAANHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDIKVM 661
               Y+ +++G+C     ++A  +   + ++GV +       L+              ++
Sbjct: 613 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 672

Query: 662 KQLPIRNVEANEIVYNKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNI 721
           K++  R ++ ++++Y  +I +  +  + K+A  ++D +++ G  P+ +TYT +ING C  
Sbjct: 673 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA 732

Query: 722 NFLRKAYELLCDMKNRGREPDIFIYTILLD---------------------------GQF 779
            F+ +A  L   M+     P+   Y   LD                             +
Sbjct: 733 GFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATY 792

[Close]

BLAST of HG10008123 vs. TAIR 10
Match: AT1G31840.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-63
Identity = 185/731 (25.31%), Postives = 334/731 (45.69%), Query Frame = 0


Query: 65  ILESLRREPNIAFSFFRELEEWGFQHNISTYAALIRILCSWGLERKLESLFSNLIASKRR 124
           +L SL  EPN A  +FR  E  G   +  T A    +L   G+    + +F  +I ++ +
Sbjct: 75  VLLSLESEPNSALKYFRWAEISGKDPSFYTIA---HVLIRNGMFDVADKVFDEMITNRGK 134

Query: 125 EFDVLDLLESLNQGYVVDGSFIRAYDA-----LIKAYVSVSLFDSVVDLLFRLERKGFVP 184
           +F+VL        G + D    R+ DA     L++      + D  +++     + G V 
Sbjct: 135 DFNVL--------GSIRD----RSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVI 194

Query: 185 HIFTCNFLLNRLIEHGKMNMALVVYKQLKRFGCQPNDYT-YATVIKALCKIGHMEEAIDI 244
              +   +LN LI   ++++    + +L R G +P+  + +  V+ AL   G + +A+D 
Sbjct: 195 PQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 254

Query: 245 FEEMSESGVVPNAFACAAYIEGLCTHDCSTSGYQLLQAWRAEQVPIDAYAYSVVIRGFCE 304
              + E G      +C   ++GL       +   L         P +   +  +I GFC+
Sbjct: 255 HRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAP-NVVTFCTLINGFCK 314

Query: 305 EMKIDEAENVFLDMEKYGVVPDALTYGVLINGYCKKLMLQKALSLHSLMLSKGVKSNCVI 364
             ++D A ++F  ME+ G+ PD + Y  LI+GY K  ML     L S  L KGVK + V+
Sbjct: 315 RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVV 374

Query: 365 ISSILQCLFRMQMYSEVVNQFKIFQGEGLFLDKVVYNIVVHALCELGKLEEAIELLEDMT 424
            SS +    +    +     +K    +G+  + V Y I++  LC+ G++ EA  +   + 
Sbjct: 375 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 434

Query: 425 SRQIQMDVVHYTTMIKGFFVQGKIHEAMIMFENLKKNGIEPDTITYNVLATGLSRNGLVS 484
            R ++  +V Y+++I GF   G +     ++E++ K G  PD + Y VL  GLS+ GL+ 
Sbjct: 435 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 494

Query: 485 KVHGLLDYMEEHGLKEDPKIRDLVIENLCIGGKVKEATEFFNSLEV----------KTVD 544
                   M    ++ +  + + +I+  C   +  EA + F  + +           TV 
Sbjct: 495 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 554

Query: 545 NYSAMINGYCAANHTKDAYELFINLSKKGVFIKRSALVRLVSSLCMEDSSDRDI-KVMKQ 604
             S M + +C         +LF +L ++       A+  +V  L  +     D  K    
Sbjct: 555 RVSIMEDAFCKHMKPTIGLQLF-DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 614

Query: 605 LPIRNVEANEIVYNKVIASLCRERNMKKAQCLFDFLVSSGLTPDLITYTMMINGYCNINF 664
           L    +E + + YN +I   C  R + +A+ +F+ L  +   P+ +T T++I+  C  N 
Sbjct: 615 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 674

Query: 665 LRKAYELLCDMKNRGREPDIFIYTILLDGQFKTRVRELCSSVEIAFTSTIFDEMKDMKFT 724
           +  A  +   M  +G +P+   Y  L+D   K        SV+I  +  +F+EM++   +
Sbjct: 675 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK--------SVDIEGSFKLFEEMQEKGIS 734

Query: 725 PDVVYYTVMIDGYCKMNKLNDAVVLFEEMIDQGIEPDTVTYTALLSGCCRSGNTEKAQTL 779
           P +V Y+++IDG CK  ++++A  +F + ID  + PD V Y  L+ G C+ G   +A  L
Sbjct: 735 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 780

The following BLAST results are available for this feature:

BLAST of HG10008123 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876888.1	0.0e+00	87.81	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]
XP_038894511.1	0.0e+00	86.44	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]
XP_008443906.1	0.0e+00	84.42	PREDICTED: pentatricopeptide repeat-containing protein At2g26790, mitochondrial-...	[more]
KAA0050042.1	0.0e+00	84.17	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_022987398.1	0.0e+00	84.10	pentatricopeptide repeat-containing protein At2g26790, mitochondrial [Cucurbita ...	[more]

BLAST of HG10008123 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81028	2.2e-151	39.75	Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidop...	[more]
Q9LMH5	7.6e-128	33.83	Putative pentatricopeptide repeat-containing protein At1g13800 OS=Arabidopsis th...	[more]
Q76C99	1.4e-68	25.85	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]
Q9LSL9	5.4e-65	25.77	Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana OX...	[more]
Q9FJE6	2.0e-64	23.05	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]

BLAST of HG10008123 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DV07	0.0e+00	84.42	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]
A0A5A7U2I6	0.0e+00	84.17	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1JGR8	0.0e+00	84.10	pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Cucurbit...	[more]
A0A6J1E1Q9	0.0e+00	82.73	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like OS=Cuc...	[more]
A0A6J1EVM2	0.0e+00	82.13	pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like isofor...	[more]

BLAST of HG10008123 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26790.1	1.6e-152	39.75	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G13800.1	5.4e-129	33.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65560.1	3.8e-66	25.77	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G59900.1	1.5e-65	23.05	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G31840.2	1.0e-63	25.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 386..418 e-value: 5.5E-9 score: 35.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 633..667 e-value: 5.6E-8 score: 30.5 coord: 598..631 e-value: 1.4E-4 score: 19.8 coord: 428..461 e-value: 1.2E-5 score: 23.1 coord: 530..558 e-value: 0.0014 score: 16.6 coord: 392..425 e-value: 2.6E-7 score: 28.4 coord: 182..215 e-value: 4.4E-5 score: 21.4 coord: 462..492 e-value: 7.4E-4 score: 17.5 coord: 713..745 e-value: 6.7E-10 score: 36.5 coord: 323..355 e-value: 8.1E-6 score: 23.7 coord: 287..321 e-value: 8.2E-8 score: 30.0 coord: 746..778 e-value: 3.1E-8 score: 31.3 coord: 217..251 e-value: 2.1E-11 score: 41.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 530..558 e-value: 6.2E-4 score: 19.8 coord: 148..177 e-value: 0.35 score: 11.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 596..644 e-value: 2.6E-12 score: 46.8 coord: 425..472 e-value: 8.9E-14 score: 51.4 coord: 285..333 e-value: 8.8E-13 score: 48.2 coord: 708..757 e-value: 8.3E-19 score: 67.5 coord: 179..228 e-value: 2.5E-14 score: 53.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 526..560 score: 9.470621
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 744..778 score: 13.526301
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 631..665 score: 12.068449
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 320..354 score: 11.038087
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 390..424 score: 11.794416
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 180..214 score: 9.865228
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 425..459 score: 11.651919
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 709..743 score: 13.405727
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 285..319 score: 12.189023
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 215..249 score: 13.953793
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 596..630 score: 10.709248
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 460..494 score: 10.336563
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 209..273 e-value: 6.5E-16 score: 60.4 coord: 34..208 e-value: 1.8E-24 score: 88.3 coord: 420..494 e-value: 1.2E-17 score: 66.0 coord: 348..419 e-value: 9.7E-11 score: 43.5 coord: 274..347 e-value: 1.0E-16 score: 63.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 686..788 e-value: 2.3E-28 score: 101.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 560..685 e-value: 2.3E-24 score: 87.7
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 13..680 coord: 725..798
None	No IPR available	PANTHER	PTHR45613:SF4	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 684..736
None	No IPR available	PANTHER	PTHR45613:SF4	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 13..680 coord: 725..798
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 684..736

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10008123.1	HG10008123.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding