HG10007795 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10007795
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSAP domain-containing protein
LocationChr10: 13553201 .. 13554644 (+)
RNA-Seq ExpressionHG10007795
SyntenyHG10007795
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAAATTCCTGCTCTCTCACGCTCACCTTCTCACCCTTCCCCACAAACACCATTCCTTTTCTCTCAACCATGGCGTCGTTCCCATCCGCTCAGTCCTATCTGCTCCGGAGAAGCGAGGTAGAAAGAAGCGGCAGTCGCGGCAGCAACAATTACACCCAAAGGACGACGATTCCACTGCACTTGAGAAGGCCCTCCGCTTCACTTTCATGGAGGAACTCATGGACCGCGCTAGAAACCACGATCCCCTTGGCGTTTCTGATGTCATTTACGATATGGTTGCCGCTGGATTGAGCCCTGGACCTCGCTCGTTCCATGGATTAGTTGTTTCTCATACTCTCAATGGTGATACTGAGGGAGCGGTGAGAACTCAGAAGCTCTTTCTCTCTCTCTCTCTCTGTGTGCGCGCGTTTGTAAATTTGTTGTTGCTGTTGTTCTTGGTTTTCGTGTGTTTATGGGTAATGTAGTCGAATTGTATACTTGCAATTGAAAGTCTAGTGCTTGAACTTATCCCATCTTCCTTCCTTTTCCATTATCGGATATTTTGAAGTATAGGGATCTTTAGCCCTTGTTTTCTCTTTCCCGTTCGAAAAACTTATCTTATCGGTATCATAATTCGATGATGAAGTTTTCTCCTCTAGTATATCCTTCGCATTTTCACTTGGTTAACAGAAGGCAGGGAAACGCATTAACGTGGACTGTGTCGAATCTCTTGTCTATTTGCCTGTATGTGTGTGTCTATTCTTTCATTCGACCAGGTGTTTCTGTACATTAGGCTCCATCCATTGTCATGTAGACGTGTTTTTTTTTAGATGGAAGGGACGGGATACATTTTTATCCTGACAAAGTAAAACTTGTTTTGGTCCCATTGTAATTTTTGTTTACAAATTCCCAGATATGTATTTTTCTAAATCTTATGGAAATGCTGAATGTAGATGCAATCTCTGAGAAGGGAATTAAGTGCTGGACTTCGTCCTCTTCACGAAACGTTTGTTGCATTAGTTCGGTTATTTGGTTCCAAGGGTCTTGCTACTAGAGGCTTAGAAATCCTTGCAGCCATGGAGAAATTGAATTATGACATCCGTCAAGCATGGCTCATTCTTACTGGTAATAGCTTGAACTTCCTGTTGAGAATGCTCCGAATAGATACATTTTAATTATGCTTATATTTTGTCTTAGTTGCTTGAGTTATTTTGACTAGAGGAACTCCTAAGGAACAAATATTTAGAAGACGCCAATGAAGTGTTCTTAAAGGGTGCCAAAGGGGGTCTCAGAGCCACCGACAAGATTTATGATCTTCTGATTGAGGAAGATTGTAAAGCCGGGGATCATTCAAATGCCTTAGAGATCTCATATGAAATGGAGGCTGCCGGGCGGATGGCAACGACCTTTCATTTCAATTGCCTTCTTAGTGTCCAGGTGATGTATCTTACTATTGGATAA

mRNA sequence

ATGTCCAAATTCCTGCTCTCTCACGCTCACCTTCTCACCCTTCCCCACAAACACCATTCCTTTTCTCTCAACCATGGCGTCGTTCCCATCCGCTCAGTCCTATCTGCTCCGGAGAAGCGAGGTAGAAAGAAGCGGCAGTCGCGGCAGCAACAATTACACCCAAAGGACGACGATTCCACTGCACTTGAGAAGGCCCTCCGCTTCACTTTCATGGAGGAACTCATGGACCGCGCTAGAAACCACGATCCCCTTGGCGTTTCTGATGTCATTTACGATATGGTTGCCGCTGGATTGAGCCCTGGACCTCGCTCGTTCCATGGATTAGTTGTTTCTCATACTCTCAATGGTGATACTGAGGGAGCGATGCAATCTCTGAGAAGGGAATTAAGTGCTGGACTTCGTCCTCTTCACGAAACGTTTGTTGCATTAGTTCGGTTATTTGGTTCCAAGGGTCTTGCTACTAGAGGCTTAGAAATCCTTGCAGCCATGGAGAAATTGAATTATGACATCCGTCAAGCATGGCTCATTCTTACTGAGGAACTCCTAAGGAACAAATATTTAGAAGACGCCAATGAAGTGTTCTTAAAGGGTGCCAAAGGGGGTCTCAGAGCCACCGACAAGATTTATGATCTTCTGATTGAGGAAGATTGTAAAGCCGGGGATCATTCAAATGCCTTAGAGATCTCATATGAAATGGAGGCTGCCGGGCGGATGGCAACGACCTTTCATTTCAATTGCCTTCTTAGTGTCCAGGTGATGTATCTTACTATTGGATAA

Coding sequence (CDS)

ATGTCCAAATTCCTGCTCTCTCACGCTCACCTTCTCACCCTTCCCCACAAACACCATTCCTTTTCTCTCAACCATGGCGTCGTTCCCATCCGCTCAGTCCTATCTGCTCCGGAGAAGCGAGGTAGAAAGAAGCGGCAGTCGCGGCAGCAACAATTACACCCAAAGGACGACGATTCCACTGCACTTGAGAAGGCCCTCCGCTTCACTTTCATGGAGGAACTCATGGACCGCGCTAGAAACCACGATCCCCTTGGCGTTTCTGATGTCATTTACGATATGGTTGCCGCTGGATTGAGCCCTGGACCTCGCTCGTTCCATGGATTAGTTGTTTCTCATACTCTCAATGGTGATACTGAGGGAGCGATGCAATCTCTGAGAAGGGAATTAAGTGCTGGACTTCGTCCTCTTCACGAAACGTTTGTTGCATTAGTTCGGTTATTTGGTTCCAAGGGTCTTGCTACTAGAGGCTTAGAAATCCTTGCAGCCATGGAGAAATTGAATTATGACATCCGTCAAGCATGGCTCATTCTTACTGAGGAACTCCTAAGGAACAAATATTTAGAAGACGCCAATGAAGTGTTCTTAAAGGGTGCCAAAGGGGGTCTCAGAGCCACCGACAAGATTTATGATCTTCTGATTGAGGAAGATTGTAAAGCCGGGGATCATTCAAATGCCTTAGAGATCTCATATGAAATGGAGGCTGCCGGGCGGATGGCAACGACCTTTCATTTCAATTGCCTTCTTAGTGTCCAGGTGATGTATCTTACTATTGGATAA

Protein sequence

MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSRQQQLHPKDDDSTALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTEELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQVMYLTIG
Homology
BLAST of HG10007795 vs. NCBI nr
Match: XP_038879291.1 (uncharacterized protein LOC120071230 [Benincasa hispida])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 241/252 (95.63%), Postives = 247/252 (98.02%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSR-QQQLHPKDDDS 60
           MSKFLLSHAHLLTLP+KHHSFSLNHGVVPIRSVLSAP+KRGRKKRQ+R QQQLH KD DS
Sbjct: 1   MSKFLLSHAHLLTLPNKHHSFSLNHGVVPIRSVLSAPDKRGRKKRQARQQQQLHSKDHDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           TALEK+LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSH LNGDTE
Sbjct: 61  TALEKSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHVLNGDTE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELSAGL PLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSAGLCPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL+RNKYLEDAN+VFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

BLAST of HG10007795 vs. NCBI nr
Match: KAG7020856.1 (putative pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.8 bits (1179), Expect = 3.2e-125
Identity = 236/259 (91.12%), Postives = 247/259 (95.37%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVV-PIRSVLSAPEKRGRKKRQSRQQQLHPKDDDS 60
           MSKFLLSH+ LLTLPHKHHSFSL++GV+ PIRSVLS  EKRGRKKRQSRQQQL  KDDDS
Sbjct: 1   MSKFLLSHSCLLTLPHKHHSFSLHNGVLPPIRSVLST-EKRGRKKRQSRQQQLQQKDDDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T LEK+LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSH LN D E
Sbjct: 61  TVLEKSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHVLNADAE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLR+ELS GLRPLHETFVALVRLFG+KGLATRGLEILAAMEKLNYDIRQAWLIL E
Sbjct: 121 GAMQSLRKELSTGLRPLHETFVALVRLFGNKGLATRGLEILAAMEKLNYDIRQAWLILIE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL++NKYLEDAN+VFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVKNKYLEDANKVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQVMYLTIG 259
           TTFHFNCLLSVQVMYL+IG
Sbjct: 241 TTFHFNCLLSVQVMYLSIG 258

BLAST of HG10007795 vs. NCBI nr
Match: XP_011660243.1 (uncharacterized protein LOC101209618 isoform X1 [Cucumis sativus] >KAE8653592.1 hypothetical protein Csa_007695 [Cucumis sativus])

HSP 1 Score: 458.8 bits (1179), Expect = 3.2e-125
Identity = 233/252 (92.46%), Postives = 243/252 (96.43%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSR-QQQLHPKDDDS 60
           MSKFLLSHAHLLTLP  H SFSLNHG++PIRSVLSAP+KRGRKKRQSR QQQL PKD+DS
Sbjct: 1   MSKFLLSHAHLLTLPSNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQPKDNDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T+LE +LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELSAGL PLHETFVALVRLFGSKGLA RGLEILAAMEKLNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSAGLLPLHETFVALVRLFGSKGLANRGLEILAAMEKLNYDIRQAWLILTE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL+R+KYLEDAN+VFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRSKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

BLAST of HG10007795 vs. NCBI nr
Match: KAA0038380.1 (Pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ97014.1 Pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 458.0 bits (1177), Expect = 5.4e-125
Identity = 232/252 (92.06%), Postives = 243/252 (96.43%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSR-QQQLHPKDDDS 60
           MSK LLSHAHLLTLP+ H SFSLNHG++PIRSVLSAP+KRGRKKRQSR QQQL  KDDDS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T+LE +LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GLRPLHETFVALVRLFGSKGLA RGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL+RNKYLEDAN+VFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

BLAST of HG10007795 vs. NCBI nr
Match: XP_008443747.1 (PREDICTED: uncharacterized protein LOC103487261 isoform X2 [Cucumis melo])

HSP 1 Score: 458.0 bits (1177), Expect = 5.4e-125
Identity = 232/252 (92.06%), Postives = 243/252 (96.43%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSR-QQQLHPKDDDS 60
           MSK LLSHAHLLTLP+ H SFSLNHG++PIRSVLSAP+KRGRKKRQSR QQQL  KDDDS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T+LE +LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GLRPLHETFVALVRLFGSKGLA RGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL+RNKYLEDAN+VFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

BLAST of HG10007795 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.3e-04
Identity = 35/122 (28.69%), Postives = 58/122 (47.54%), Query Frame = 0

Query: 130 SAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQ-AWLILTEELLRNKYLE 189
           S G  P   T+ AL+++FG  G+ T  L +L  ME+ +       +  L    +R  + +
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368

Query: 190 DANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLL 249
           +A  V     K G+      Y  +I+   KAG    AL++ Y M+ AG +  T  +N +L
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428

Query: 250 SV 251
           S+
Sbjct: 429 SL 430

BLAST of HG10007795 vs. ExPASy Swiss-Prot
Match: O04504 (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX=3702 GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 4.9e-04
Identity = 40/167 (23.95%), Postives = 78/167 (46.71%), Query Frame = 0

Query: 89  VIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLRPLHETFVALVRLFG 148
           V+ +MV   +SP   +F+ L+     + +  G+M+  +  L   ++P   ++ +L+    
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI---- 342

Query: 149 SKGLATRG--LEILAAMEKLNYDIRQAWLILTEELL----RNKYLEDANEVFLKGAKGGL 208
             GL   G   E ++  +K+     Q  LI    L+    +N  L++A ++F      G 
Sbjct: 343 -NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 402

Query: 209 RATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLS 250
             T ++Y++LI+  CK G   +   +  EME  G +     +NCL++
Sbjct: 403 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444

BLAST of HG10007795 vs. ExPASy Swiss-Prot
Match: Q0WLC6 (Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRL1 PE=1 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 6.5e-04
Identity = 38/166 (22.89%), Postives = 66/166 (39.76%), Query Frame = 0

Query: 88  DVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLRPLHETFVALVRLF 147
           +V + M  +G+     +F  L+      G    A  +     S  ++P    F AL+   
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582

Query: 148 GSKGLATRGLEILAAMEKLNYDIRQAWL---ILTEELLRNKYLEDANEVFLKGAKGGLRA 207
           G  G   R  ++LA M+   + I    +    L +       +E A EV+    K G+R 
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642

Query: 208 TDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSV 251
           T ++Y + +    K+GD   A  I  +M+          F+ L+ V
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV 688

BLAST of HG10007795 vs. ExPASy Swiss-Prot
Match: Q9XIM8 (Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX=3702 GN=At2g15980 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.4e-04
Identity = 41/158 (25.95%), Postives = 71/158 (44.94%), Query Frame = 0

Query: 85  GVSDVIYD---MVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRR-ELSAGLRPLHETF 144
           G+ DV  D    +   + P   +F+ ++VS    G+TE   +  R  E   G  P   ++
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284

Query: 145 VALVRLFGSKGLATRGLEILAAME--KLNYDIRQAWLILTEELLRNKYLEDANEVFLKGA 204
             L+  + ++GL +   ++   M+   + YDI  A+  +   L  N  +  A E+F    
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDI-VAYNTMIGGLCSNFEVVKAKELFRDMG 344

Query: 205 KGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAG 237
             G+  T   Y+ L+   CKAGD  + L +  EM+  G
Sbjct: 345 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381

BLAST of HG10007795 vs. ExPASy TrEMBL
Match: A0A5A7T4U0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00670 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 232/252 (92.06%), Postives = 243/252 (96.43%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSR-QQQLHPKDDDS 60
           MSK LLSHAHLLTLP+ H SFSLNHG++PIRSVLSAP+KRGRKKRQSR QQQL  KDDDS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T+LE +LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GLRPLHETFVALVRLFGSKGLA RGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL+RNKYLEDAN+VFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

BLAST of HG10007795 vs. ExPASy TrEMBL
Match: A0A1S3B8T6 (uncharacterized protein LOC103487261 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487261 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 232/252 (92.06%), Postives = 243/252 (96.43%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSR-QQQLHPKDDDS 60
           MSK LLSHAHLLTLP+ H SFSLNHG++PIRSVLSAP+KRGRKKRQSR QQQL  KDDDS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T+LE +LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GLRPLHETFVALVRLFGSKGLA RGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL+RNKYLEDAN+VFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

BLAST of HG10007795 vs. ExPASy TrEMBL
Match: A0A1S3B9H7 (uncharacterized protein LOC103487261 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487261 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125
Identity = 232/252 (92.06%), Postives = 243/252 (96.43%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVVPIRSVLSAPEKRGRKKRQSR-QQQLHPKDDDS 60
           MSK LLSHAHLLTLP+ H SFSLNHG++PIRSVLSAP+KRGRKKRQSR QQQL  KDDDS
Sbjct: 1   MSKLLLSHAHLLTLPYNHRSFSLNHGLLPIRSVLSAPDKRGRKKRQSRHQQQLQLKDDDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T+LE +LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE
Sbjct: 61  TSLENSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLRRELS+GLRPLHETFVALVRLFGSKGLA RGLEILAAME+LNYDIRQAWLILTE
Sbjct: 121 GAMQSLRRELSSGLRPLHETFVALVRLFGSKGLANRGLEILAAMERLNYDIRQAWLILTE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL+RNKYLEDAN+VFLKGAK GLRATDKIYDL+IEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVRNKYLEDANKVFLKGAKAGLRATDKIYDLMIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 252

BLAST of HG10007795 vs. ExPASy TrEMBL
Match: A0A6J1EQ88 (uncharacterized protein LOC111436825 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436825 PE=4 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 6.1e-122
Identity = 229/252 (90.87%), Postives = 239/252 (94.84%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVV-PIRSVLSAPEKRGRKKRQSRQQQLHPKDDDS 60
           MSKFLLSH++LLTLPHKHHSFSL++GV  PIRSVLS  EKRGRKKRQSRQQQL  KDDDS
Sbjct: 1   MSKFLLSHSYLLTLPHKHHSFSLHNGVFPPIRSVLST-EKRGRKKRQSRQQQLQQKDDDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T  EK+LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSH LN D E
Sbjct: 61  TVFEKSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHVLNADAE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLR+ELS GLRPLHETFVALVRLFG+KGLATRGLEILAAMEKLNYDIRQAWLIL E
Sbjct: 121 GAMQSLRKELSTGLRPLHETFVALVRLFGNKGLATRGLEILAAMEKLNYDIRQAWLILIE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL++NKYLEDAN+VFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVKNKYLEDANKVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 251

BLAST of HG10007795 vs. ExPASy TrEMBL
Match: A0A6J1L2D9 (uncharacterized protein LOC111499221 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499221 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.5e-120
Identity = 228/252 (90.48%), Postives = 238/252 (94.44%), Query Frame = 0

Query: 1   MSKFLLSHAHLLTLPHKHHSFSLNHGVV-PIRSVLSAPEKRGRKKRQSRQQQLHPKDDDS 60
           MSKFLLSH+ LLTLPHKHHSFSL++ V+ PIRSVLS  EKRGRKKRQSRQQQL  KD DS
Sbjct: 1   MSKFLLSHSCLLTLPHKHHSFSLHNAVLPPIRSVLST-EKRGRKKRQSRQQQLQQKDYDS 60

Query: 61  TALEKALRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTE 120
           T LEK+LRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSH LN D E
Sbjct: 61  TVLEKSLRFTFMEELMDRARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHVLNADAE 120

Query: 121 GAMQSLRRELSAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTE 180
           GAMQSLR+ELS GLRPLHETFVALVRLFG+KGLATRGLEILAAMEKLNYDIRQAWLIL E
Sbjct: 121 GAMQSLRKELSTGLRPLHETFVALVRLFGNKGLATRGLEILAAMEKLNYDIRQAWLILIE 180

Query: 181 ELLRNKYLEDANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240
           EL++NKYLEDAN+VFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA
Sbjct: 181 ELVKNKYLEDANKVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMA 240

Query: 241 TTFHFNCLLSVQ 252
           TTFHFNCLLSVQ
Sbjct: 241 TTFHFNCLLSVQ 251

BLAST of HG10007795 vs. TAIR 10
Match: AT3G04260.1 (plastid transcriptionally active 3 )

HSP 1 Score: 329.7 bits (844), Expect = 2.1e-90
Identity = 167/234 (71.37%), Postives = 195/234 (83.33%), Query Frame = 0

Query: 26  GVVPIRSVLSAPEKRGRKKRQSRQQQLHPKDDD--------STALEKALRFTFMEELMDR 85
           G+  IR  +SAPEK+ R++R+ ++      DD          +ALE++LR TFM+ELM+R
Sbjct: 24  GISSIRCSISAPEKKPRRRRKQKRGDGAENDDSLSFGSGEAVSALERSLRLTFMDELMER 83

Query: 86  ARNHDPLGVSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLRPLH 145
           ARN D  GVS+VIYDM+AAGLSPGPRSFHGLVV+H LNGD +GAM SLR+EL AG RPL 
Sbjct: 84  ARNRDTSGVSEVIYDMIAAGLSPGPRSFHGLVVAHALNGDEQGAMHSLRKELGAGQRPLP 143

Query: 146 ETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQAWLILTEELLRNKYLEDANEVFLKG 205
           ET +ALVRL GSKG ATRGLEILAAMEKL YDIRQAWLIL EEL+R  +LEDAN+VFLKG
Sbjct: 144 ETMIALVRLSGSKGNATRGLEILAAMEKLKYDIRQAWLILVEELMRINHLEDANKVFLKG 203

Query: 206 AKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQ 252
           A+GG+RATD++YDL+IEEDCKAGDHSNAL+ISYEMEAAGRMATTFHFNCLLSVQ
Sbjct: 204 ARGGMRATDQLYDLMIEEDCKAGDHSNALDISYEMEAAGRMATTFHFNCLLSVQ 257

BLAST of HG10007795 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 48.5 bits (114), Expect = 9.3e-06
Identity = 35/122 (28.69%), Postives = 58/122 (47.54%), Query Frame = 0

Query: 130 SAGLRPLHETFVALVRLFGSKGLATRGLEILAAMEKLNYDIRQ-AWLILTEELLRNKYLE 189
           S G  P   T+ AL+++FG  G+ T  L +L  ME+ +       +  L    +R  + +
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSK 368

Query: 190 DANEVFLKGAKGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLL 249
           +A  V     K G+      Y  +I+   KAG    AL++ Y M+ AG +  T  +N +L
Sbjct: 369 EAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVL 428

Query: 250 SV 251
           S+
Sbjct: 429 SL 430

BLAST of HG10007795 vs. TAIR 10
Match: AT4G34830.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.6e-05
Identity = 38/166 (22.89%), Postives = 66/166 (39.76%), Query Frame = 0

Query: 88  DVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLRPLHETFVALVRLF 147
           +V + M  +G+     +F  L+      G    A  +     S  ++P    F AL+   
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582

Query: 148 GSKGLATRGLEILAAMEKLNYDIRQAWL---ILTEELLRNKYLEDANEVFLKGAKGGLRA 207
           G  G   R  ++LA M+   + I    +    L +       +E A EV+    K G+R 
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642

Query: 208 TDKIYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSV 251
           T ++Y + +    K+GD   A  I  +M+          F+ L+ V
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV 688

BLAST of HG10007795 vs. TAIR 10
Match: AT2G15980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 45.8 bits (107), Expect = 6.0e-05
Identity = 41/158 (25.95%), Postives = 71/158 (44.94%), Query Frame = 0

Query: 85  GVSDVIYD---MVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRR-ELSAGLRPLHETF 144
           G+ DV  D    +   + P   +F+ ++VS    G+TE   +  R  E   G  P   ++
Sbjct: 225 GLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284

Query: 145 VALVRLFGSKGLATRGLEILAAME--KLNYDIRQAWLILTEELLRNKYLEDANEVFLKGA 204
             L+  + ++GL +   ++   M+   + YDI  A+  +   L  N  +  A E+F    
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDI-VAYNTMIGGLCSNFEVVKAKELFRDMG 344

Query: 205 KGGLRATDKIYDLLIEEDCKAGDHSNALEISYEMEAAG 237
             G+  T   Y+ L+   CKAGD  + L +  EM+  G
Sbjct: 345 LKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381

BLAST of HG10007795 vs. TAIR 10
Match: AT2G17140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 39/149 (26.17%), Postives = 65/149 (43.62%), Query Frame = 0

Query: 86  VSDVIYDMVAAGLSPGPRSFHGLVVSHTLNGDTEGAMQSLRRELSAGLRPLHETFVALVR 145
           VS +  DMV  G++P   +F+ L+ +   +   + A +        G +P   TF  LVR
Sbjct: 131 VSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVR 190

Query: 146 LFGSKGLATRGLEILAAMEKLN-YDIRQAWLILTEELLRNKYLEDANEVFLKGAKGGLRA 205
            +   GL  +GLE+L AME       +  +  +     R    +D+ ++  K  + GL  
Sbjct: 191 GYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVP 250

Query: 206 TDKIYDLLIEEDCKAGDHSNALEISYEME 234
               ++  I   CK G   +A  I  +ME
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDME 279

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038879291.12.1e-12995.63uncharacterized protein LOC120071230 [Benincasa hispida][more]
KAG7020856.13.2e-12591.12putative pentatricopeptide repeat-containing protein [Cucurbita argyrosperma sub... [more]
XP_011660243.13.2e-12592.46uncharacterized protein LOC101209618 isoform X1 [Cucumis sativus] >KAE8653592.1 ... [more]
KAA0038380.15.4e-12592.06Pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ97014... [more]
XP_008443747.15.4e-12592.06PREDICTED: uncharacterized protein LOC103487261 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
O646241.3e-0428.69Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
O045044.9e-0423.95Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana OX... [more]
Q0WLC66.5e-0422.89Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis t... [more]
Q9XIM88.4e-0425.95Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7T4U02.6e-12592.06Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B8T62.6e-12592.06uncharacterized protein LOC103487261 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B9H72.6e-12592.06uncharacterized protein LOC103487261 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1EQ886.1e-12290.87uncharacterized protein LOC111436825 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1L2D92.5e-12090.48uncharacterized protein LOC111499221 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT3G04260.12.1e-9071.37plastid transcriptionally active 3 [more]
AT2G18940.19.3e-0628.69Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G34830.14.6e-0522.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G15980.16.0e-0525.95Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G17140.11.0e-0426.17Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 39..172
e-value: 2.6E-5
score: 25.6
coord: 173..253
e-value: 2.6E-5
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..59
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 22..252
NoneNo IPR availablePANTHERPTHR31407:SF5PLASTID TRANSCRIPTIONALLY ACTIVE 3coord: 22..252

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10007795.1HG10007795.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0098869 cellular oxidant detoxification
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0044238 primary metabolic process
biological_process GO:0006979 response to oxidative stress
molecular_function GO:0020037 heme binding
molecular_function GO:0016301 kinase activity
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0005515 protein binding