HG10006590 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006590
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr07: 20141653 .. 20142267 (-)
RNA-Seq Expression	HG10006590
Synteny	HG10006590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACCGTGATTCTTCCGCCGCAGGACTGCCTTGGGAAAGGCCTCCGCCACCAAGGTCTAGTTCTATCGCCTCCGTTGAAATCGCGGCGAAATTCTAACCCTAATAGTACTAGTTCTTCCACAAACCCTAACTTCAATCACGATGATACGACTTGTTCCGGCAGACGGAGGAGGAGTGCAGCGGTGGGAGTTAAGACTAACCGTCAAATCAATAGAGGACGGAGCCGCGCGGAAGAGCCGTCTACGGCGGCGAAGATTTCATCGAAGAATTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAGATGTTGACTCCCGATCGAGGAGTTGGTGATGGTGATGATTCTTGTGGTAAAAGGAGGTTGGAATCGAACGGTGAGGATGTGGATTTGGTTTTGGGATCCACTGATCGGTTGGGTCCAGACCCCGATTTGATGCGGAAGCAGGTTGTGTTAACGGAGTTCAAGGTTGTTGATGGTATCTATGCCGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTCTAGGTAAGAACGGCACTGCAACAAGCGATCTGAGGCGGTTGCTTCGACTTGATTTAGGCTAA

mRNA sequence

ATGGCTACCGTGATTCTTCCGCCGCAGGACTGCCTTGGGAAAGGCCTCCGCCACCAAGGTCTAGTTCTATCGCCTCCGTTGAAATCGCGGCGAAATTCTAACCCTAATAGTACTAGTTCTTCCACAAACCCTAACTTCAATCACGATGATACGACTTGTTCCGGCAGACGGAGGAGGAGTGCAGCGGTGGGAGTTAAGACTAACCGTCAAATCAATAGAGGACGGAGCCGCGCGGAAGAGCCGTCTACGGCGGCGAAGATTTCATCGAAGAATTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAGATGTTGACTCCCGATCGAGGAGTTGGTGATGGTGATGATTCTTGTGGTAAAAGGAGGTTGGAATCGAACGGTGAGGATGTGGATTTGGTTTTGGGATCCACTGATCGGTTGGGTCCAGACCCCGATTTGATGCGGAAGCAGGTTGTGTTAACGGAGTTCAAGGTTGTTGATGGTATCTATGCCGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTCTAGGTAAGAACGGCACTGCAACAAGCGATCTGAGGCGGTTGCTTCGACTTGATTTAGGCTAA

Coding sequence (CDS)

ATGGCTACCGTGATTCTTCCGCCGCAGGACTGCCTTGGGAAAGGCCTCCGCCACCAAGGTCTAGTTCTATCGCCTCCGTTGAAATCGCGGCGAAATTCTAACCCTAATAGTACTAGTTCTTCCACAAACCCTAACTTCAATCACGATGATACGACTTGTTCCGGCAGACGGAGGAGGAGTGCAGCGGTGGGAGTTAAGACTAACCGTCAAATCAATAGAGGACGGAGCCGCGCGGAAGAGCCGTCTACGGCGGCGAAGATTTCATCGAAGAATTTGGTTATGGGACAGGTTAAGATCCTGAAGCGTGGAGAGATGTTGACTCCCGATCGAGGAGTTGGTGATGGTGATGATTCTTGTGGTAAAAGGAGGTTGGAATCGAACGGTGAGGATGTGGATTTGGTTTTGGGATCCACTGATCGGTTGGGTCCAGACCCCGATTTGATGCGGAAGCAGGTTGTGTTAACGGAGTTCAAGGTTGTTGATGGTATCTATGCCGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTTTTCTAGGTAAGAACGGCACTGCAACAAGCGATCTGAGGCGGTTGCTTCGACTTGATTTAGGCTAA

Protein sequence

MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRSAAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGVGDGDDSCGKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGKNGTATSDLRRLLRLDLG

Homology

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BLAST of HG10006590 vs. NCBI nr
Match: XP_038890387.1 (uncharacterized protein LOC120079968 [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 6.7e-102
Identity = 192/204 (94.12%), Postives = 199/204 (97.55%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKG RHQGLVLSPPLKSRRNSNP+STSSSTNPNFNHDDTTCSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGFRHQGLVLSPPLKSRRNSNPSSTSSSTNPNFNHDDTTCSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGVGDGDDSCG 120
           AAVGVK NRQ+NRGRSRAEEPST AKISSKNL+MGQVKILKRGE LTPD+GVGDG+DSCG
Sbjct: 61  AAVGVKANRQVNRGRSRAEEPSTLAKISSKNLIMGQVKILKRGETLTPDQGVGDGNDSCG 120

Query: 121 KRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPSSVP 180
           KRRLES G+DVDLVLGSTDRLGPDPDLM+KQVVLTEFKVVDGIYAGSGAFFASPPPSSVP
Sbjct: 121 KRRLESKGDDVDLVLGSTDRLGPDPDLMQKQVVLTEFKVVDGIYAGSGAFFASPPPSSVP 180

Query: 181 LPSFLGKNGTATSDLRRLLRLDLG 205
           LPSFLGKNGTATSDLRRLLRLDLG
Sbjct: 181 LPSFLGKNGTATSDLRRLLRLDLG 204

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BLAST of HG10006590 vs. NCBI nr
Match: XP_011648719.1 (uncharacterized protein LOC105434545 [Cucumis sativus] >KGN60738.1 hypothetical protein Csa_019329 [Cucumis sativus])

HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83
Identity = 167/204 (81.86%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNSTS+S+NPN NHD  +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGVG-DGDDSC 120
           A+VG+K NRQ NR RSR  E ST AK+++++LVMGQVKILKRGE+LTPDRGVG  GDDSC
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPSSV 180
           GKRRLES GE+VDLVLGSTDRLGPD DLM+KQVVLT+FK  DG+YAGSGAFFASPPPSSV
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSV 180

Query: 181 PLPSFLGKNGTATSDLRRLLRLDL 204
           PLPSF  KNG AT+DLRRLLRLDL
Sbjct: 181 PLPSFAVKNGIATTDLRRLLRLDL 202

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BLAST of HG10006590 vs. NCBI nr
Match: XP_008456814.1 (PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo] >KAA0063545.1 uncharacterized protein E6C27_scaffold329G00510 [Cucumis melo var. makuwa] >TYJ97872.1 uncharacterized protein E5676_scaffold285G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 320.1 bits (819), Expect = 1.4e-83
Identity = 168/206 (81.55%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPNFNHDD +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSNPNSASTSSNPNFNHDDKSCSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGV---GDGDD 120
           A+VG+K NRQ NR RSR  E ST AK+++K+LVMGQVKILKRGE+LTP RGV   G G D
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 120

Query: 121 SCGKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPS 180
           SCGKRRLES  E+VDLVLGSTDRLGPDPDLM+KQVVLTEFK  DG+YAGSGAFFASPPPS
Sbjct: 121 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 180

Query: 181 SVPLPSFLGKNGTATSDLRRLLRLDL 204
           SVPLPSF+ KNG AT+DLRRLLRLDL
Sbjct: 181 SVPLPSFVVKNGIATTDLRRLLRLDL 204

[Close]

BLAST of HG10006590 vs. NCBI nr
Match: XP_022143251.1 (uncharacterized protein LOC111013161 [Momordica charantia])

HSP 1 Score: 306.6 bits (784), Expect = 1.6e-79
Identity = 169/207 (81.64%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLG GLR QGLVLS PLKSRRNS PN  SSSTNPNFNHD    SGRRRRS
Sbjct: 1   MATVILPPQDCLGNGLRRQGLVLSAPLKSRRNSKPN-PSSSTNPNFNHD--VSSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPST----AAKISSKNLVMGQVKILKRGEMLTPDRGVGDGD 120
            AVGVK+NRQ NRGRSR+ EPST    AAK+S K LVMGQVKILKRGEMLTPDRGVG  D
Sbjct: 61  PAVGVKSNRQANRGRSRSGEPSTAPSAAAKVSPKALVMGQVKILKRGEMLTPDRGVGGVD 120

Query: 121 DSCGKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPP 180
             CGKRRLE   +D+DL LGSTDRLGPDPDLM+KQVV +E KV DGIYAGSGAFFASPPP
Sbjct: 121 --CGKRRLELKADDMDLGLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPP 180

Query: 181 SSVPLPSFLGKNGTATSDLRRLLRLDL 204
           SSVPLPSFLG NGTATSDLRRLLRLDL
Sbjct: 181 SSVPLPSFLGNNGTATSDLRRLLRLDL 202

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BLAST of HG10006590 vs. NCBI nr
Match: XP_022937911.1 (uncharacterized protein LOC111444161 [Cucurbita moschata] >KAG6586356.1 hypothetical protein SDJN03_19089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021203.1 hypothetical protein SDJN02_17891, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 304.3 bits (778), Expect = 7.9e-79
Identity = 167/203 (82.27%), Postives = 176/203 (86.70%), Query Frame = 0


Query: 3   TVILPPQDCLGKGLRHQGLVL-SPPLKSRRNSNP-NSTSSSTNPNFNHDDTTCSGRRRRS 62
           TVIL PQDCLG GLRHQGLVL SPPLKSRRNSN  +S+SSS NPNFN DD TCSG RRRS
Sbjct: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSG-RRRS 63

Query: 63  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGVGDGDDSCG 122
           + VGVK NR++NRGRSR  E STAAKIS KNLVMGQVKILKRGEML PD GVGDG    G
Sbjct: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----G 123

Query: 123 KRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPSSVP 182
           KR LES  ED+DLVLGSTDRLGPDPDLM+KQVV +E KV DGIYAGSGAFFASPPPSSVP
Sbjct: 124 KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVP 183

Query: 183 LPSFLGKNGTATSDLRRLLRLDL 204
           LPSFLGKNGTAT+DLRRLLRLDL
Sbjct: 184 LPSFLGKNGTATNDLRRLLRLDL 201

[Close]

BLAST of HG10006590 vs. ExPASy TrEMBL
Match: A0A5A7VCB7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00850 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.8e-84
Identity = 168/206 (81.55%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPNFNHDD +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSNPNSASTSSNPNFNHDDKSCSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGV---GDGDD 120
           A+VG+K NRQ NR RSR  E ST AK+++K+LVMGQVKILKRGE+LTP RGV   G G D
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 120

Query: 121 SCGKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPS 180
           SCGKRRLES  E+VDLVLGSTDRLGPDPDLM+KQVVLTEFK  DG+YAGSGAFFASPPPS
Sbjct: 121 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 180

Query: 181 SVPLPSFLGKNGTATSDLRRLLRLDL 204
           SVPLPSF+ KNG AT+DLRRLLRLDL
Sbjct: 181 SVPLPSFVVKNGIATTDLRRLLRLDL 204

[Close]

BLAST of HG10006590 vs. ExPASy TrEMBL
Match: A0A0A0LG41 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008780 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.8e-84
Identity = 167/204 (81.86%), Postives = 183/204 (89.71%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNSTS+S+NPN NHD  +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLSSRRNSNPNSTSTSSNPNLNHDARSCSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGVG-DGDDSC 120
           A+VG+K NRQ NR RSR  E ST AK+++++LVMGQVKILKRGE+LTPDRGVG  GDDSC
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMATRSLVMGQVKILKRGEILTPDRGVGAGGDDSC 120

Query: 121 GKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPSSV 180
           GKRRLES GE+VDLVLGSTDRLGPD DLM+KQVVLT+FK  DG+YAGSGAFFASPPPSSV
Sbjct: 121 GKRRLESKGEEVDLVLGSTDRLGPDADLMQKQVVLTDFK--DGMYAGSGAFFASPPPSSV 180

Query: 181 PLPSFLGKNGTATSDLRRLLRLDL 204
           PLPSF  KNG AT+DLRRLLRLDL
Sbjct: 181 PLPSFAVKNGIATTDLRRLLRLDL 202

[Close]

BLAST of HG10006590 vs. ExPASy TrEMBL
Match: A0A1S3C5D8 (uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.8e-84
Identity = 168/206 (81.55%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPNFNHDD +CSGRRRRS
Sbjct: 1   MATVILPPQDCLGKGLRHQGLVLSAPLNSRRNSNPNSASTSSNPNFNHDDKSCSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGV---GDGDD 120
           A+VG+K NRQ NR RSR  E ST AK+++K+LVMGQVKILKRGE+LTP RGV   G G D
Sbjct: 61  ASVGLKANRQANRERSRVRESSTTAKMTTKSLVMGQVKILKRGEILTPGRGVGGGGGGGD 120

Query: 121 SCGKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPS 180
           SCGKRRLES  E+VDLVLGSTDRLGPDPDLM+KQVVLTEFK  DG+YAGSGAFFASPPPS
Sbjct: 121 SCGKRRLESKVEEVDLVLGSTDRLGPDPDLMQKQVVLTEFK--DGMYAGSGAFFASPPPS 180

Query: 181 SVPLPSFLGKNGTATSDLRRLLRLDL 204
           SVPLPSF+ KNG AT+DLRRLLRLDL
Sbjct: 181 SVPLPSFVVKNGIATTDLRRLLRLDL 204

[Close]

BLAST of HG10006590 vs. ExPASy TrEMBL
Match: A0A6J1CPP9 (uncharacterized protein LOC111013161 OS=Momordica charantia OX=3673 GN=LOC111013161 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.7e-80
Identity = 169/207 (81.64%), Postives = 176/207 (85.02%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSTSSSTNPNFNHDDTTCSGRRRRS 60
           MATVILPPQDCLG GLR QGLVLS PLKSRRNS PN  SSSTNPNFNHD    SGRRRRS
Sbjct: 1   MATVILPPQDCLGNGLRRQGLVLSAPLKSRRNSKPN-PSSSTNPNFNHD--VSSGRRRRS 60

Query: 61  AAVGVKTNRQINRGRSRAEEPST----AAKISSKNLVMGQVKILKRGEMLTPDRGVGDGD 120
            AVGVK+NRQ NRGRSR+ EPST    AAK+S K LVMGQVKILKRGEMLTPDRGVG  D
Sbjct: 61  PAVGVKSNRQANRGRSRSGEPSTAPSAAAKVSPKALVMGQVKILKRGEMLTPDRGVGGVD 120

Query: 121 DSCGKRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPP 180
             CGKRRLE   +D+DL LGSTDRLGPDPDLM+KQVV +E KV DGIYAGSGAFFASPPP
Sbjct: 121 --CGKRRLELKADDMDLGLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPP 180

Query: 181 SSVPLPSFLGKNGTATSDLRRLLRLDL 204
           SSVPLPSFLG NGTATSDLRRLLRLDL
Sbjct: 181 SSVPLPSFLGNNGTATSDLRRLLRLDL 202

[Close]

BLAST of HG10006590 vs. ExPASy TrEMBL
Match: A0A6J1FBP4 (uncharacterized protein LOC111444161 OS=Cucurbita moschata OX=3662 GN=LOC111444161 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.8e-79
Identity = 167/203 (82.27%), Postives = 176/203 (86.70%), Query Frame = 0


Query: 3   TVILPPQDCLGKGLRHQGLVL-SPPLKSRRNSNP-NSTSSSTNPNFNHDDTTCSGRRRRS 62
           TVIL PQDCLG GLRHQGLVL SPPLKSRRNSN  +S+SSS NPNFN DD TCSG RRRS
Sbjct: 4   TVILQPQDCLGNGLRHQGLVLSSPPLKSRRNSNRISSSSSSANPNFNQDDATCSG-RRRS 63

Query: 63  AAVGVKTNRQINRGRSRAEEPSTAAKISSKNLVMGQVKILKRGEMLTPDRGVGDGDDSCG 122
           + VGVK NR++NRGRSR  E STAAKIS KNLVMGQVKILKRGEML PD GVGDG    G
Sbjct: 64  SEVGVKANRRVNRGRSRVVETSTAAKISPKNLVMGQVKILKRGEMLCPDGGVGDG----G 123

Query: 123 KRRLESNGEDVDLVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFASPPPSSVP 182
           KR LES  ED+DLVLGSTDRLGPDPDLM+KQVV +E KV DGIYAGSGAFFASPPPSSVP
Sbjct: 124 KRMLESKVEDLDLVLGSTDRLGPDPDLMQKQVVFSELKVADGIYAGSGAFFASPPPSSVP 183

Query: 183 LPSFLGKNGTATSDLRRLLRLDL 204
           LPSFLGKNGTAT+DLRRLLRLDL
Sbjct: 184 LPSFLGKNGTATNDLRRLLRLDL 201

[Close]

BLAST of HG10006590 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 71/211 (33.65%), Postives = 90/211 (42.65%), Query Frame = 0


Query: 1   MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSN--PNSTSSSTNPNFNHDDTTCSGRRR 60
           M   +L PQDCL     H        +K  RN +  PN    + + N        S +  
Sbjct: 1   MGVAVLNPQDCLKDPFSH--------MKQHRNPSACPNRQKKTVSNNRTRRSPPRS-QSS 60

Query: 61  RSAAVGVKTNRQINRGRSRAEEPSTAAKISSKNLV-MGQVKILKRGEMLTPDRGVGDGDD 120
           RS++  V       R    A  P    K S  N V + QV+ILKRGE             
Sbjct: 61  RSSSPPVAPPLPPPRAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGE------------- 120

Query: 121 SCGKRRLESNGEDVDLV-----LGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFA 180
                  E   E  DLV     LGST R+GPDP L+  Q+ L+  K     +        
Sbjct: 121 -------EIPKETSDLVVEMSDLGSTRRIGPDPGLIPGQIRLSGRKSKSAPFYAGPVTMT 180

Query: 181 SPPPSSVPLPSFLGKNGTATSDLRRLLRLDL 204
           SPPPS VPLP+F  K   AT+DL R+LRLD+
Sbjct: 181 SPPPSDVPLPAFFTKK--ATNDLIRILRLDI 180

[Close]

BLAST of HG10006590 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 0


Query: 75  RSRAEEPSTA-AKISSKNLVMGQVKILKRGEMLTPDRGVGDGDDSCGKRR-LESNGEDVD 134
           R R + P+   +  ++ NLVM QVKILKRGE L+      +   S   RR +    +DVD
Sbjct: 37  RRRKQSPTVVKSPAANPNLVMEQVKILKRGETLSAFNKNKENISSDDTRRPVLKMIKDVD 96

Query: 135 LVLGSTDRLGPDPDLMRKQVVLTEFKVVDGIYAGSGAFFA-SPPPSSVPLPSFLG 187
           L++ +T+R+GP+P+++ KQ+         G+ + +GA  + SPPPS VP+P FLG
Sbjct: 97  LIVSATNRIGPEPEILMKQIGAL------GLQSFAGANCSLSPPPSCVPIPCFLG 145

[Close]

BLAST of HG10006590 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-05
Identity = 27/52 (51.92%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 161 DGIYAGSGAFFASPPPSSVPLPSFLGK-----------NGTATSDLRRLLRL 202
           D IYAGS  F  SP PSS+PLPSF  K           + +A+ DLRRLLRL
Sbjct: 83  DDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQVVVVSIDDSASQDLRRLLRL 134

The following BLAST results are available for this feature:

BLAST of HG10006590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890387.1	6.7e-102	94.12	uncharacterized protein LOC120079968 [Benincasa hispida]	[more]
XP_011648719.1	1.4e-83	81.86	uncharacterized protein LOC105434545 [Cucumis sativus] >KGN60738.1 hypothetical ...	[more]
XP_008456814.1	1.4e-83	81.55	PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo] >KAA0063545.1 unc...	[more]
XP_022143251.1	1.6e-79	81.64	uncharacterized protein LOC111013161 [Momordica charantia]	[more]
XP_022937911.1	7.9e-79	82.27	uncharacterized protein LOC111444161 [Cucurbita moschata] >KAG6586356.1 hypothet...	[more]

BLAST of HG10006590 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10006590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCB7	6.8e-84	81.55	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LG41	6.8e-84	81.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008780 PE=4 SV=1	[more]
A0A1S3C5D8	6.8e-84	81.55	uncharacterized protein LOC103496651 OS=Cucumis melo OX=3656 GN=LOC103496651 PE=...	[more]
A0A6J1CPP9	7.7e-80	81.64	uncharacterized protein LOC111013161 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1FBP4	3.8e-79	82.27	uncharacterized protein LOC111444161 OS=Cucurbita moschata OX=3662 GN=LOC1114441...	[more]

BLAST of HG10006590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32020.1	2.0e-11	33.65	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02040.1	2.0e-11	39.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G21570.1	3.6e-05	51.92	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..84
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 1..203
None	No IPR available	PANTHER	PTHR33670:SF15	OS02G0797600 PROTEIN	coord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006590.1	HG10006590.1	mRNA