HG10006175 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10006175
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein CHLOROPLAST IMPORT APPARATUS 2
Location	Chr07: 15256992 .. 15266958 (+)
RNA-Seq Expression	HG10006175
Synteny	HG10006175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCCATGTATAAGTGGCGGTGGGAGAGCTTACAATTTCGACTTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCACAAACTTCATCGCCTTCTTCAACTTTATCTGATTCAAGCAACAACACACAGCTTGCAATTTCCACTAGAAAATCCAGAACTCCTCGAAAACGCCCAAATCAAACCTACAATGAGGCTACAGTTTTGCTCTCAACGGCATATCCAAATGTTTTTTCCACTAAACATCTCACAAATCCGCGAAAATTCACCAAATCACATGATGATTCTCTCTTCTGTGAATCCGCTGAATTGCTTTTGCCTTTTCGAGTAATCGATAGTTCTGGATTTCTCCTTCACCAACCGTTGCTTCAAGAAAAACCTAATTCCCAAACTCAATCCAAATTGACGAATCTTTGGGAAAATCGGCCGTGTTCCAGCCCAGGAGAGATCGATTTCCAACCGAATTTGATGGAGATTGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAAAAGGTAATTCAACGCAAGATTCTTGTGTGAATAATCATCCTCGGAATTGGAATTGCTATTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATCTGGCTTCGGAATGCGGAAGGGAATCGAACGAACAGCAATCCGAGGAGTCGATAACGGAAACTGGTGGCGATTTCCTACTGTCGACGTAGTCGAAATCTCTCCAAAACTAAATCCAAAGCCACCGGCTCCGGCTCCATCACCGGCCGCCGTCGCGACAAAGAAGAAGAAAAAGAAAGTGGAGAAACTTACAGTAATCGAATCGAAGAAAGCAGCAATGCCACTACAAAAGGAGAAATCAGAGAAATCAGAGAAGCCGATTCCGAAATCGAAACCTACTGGATTTCTGAAATTGAACTACGAAGCCGTCGCCGACGCTTGGTCTAGCCGAGGATCTCCATTTTCCGATGAGATTCCGGGATCCGATACGGCGGGAAGTGATGTAAATGTACGTCTCTCATCCCGCCACCGAAAATCAAAACCCAAGAAACTTTGAAAAAAAATAAAAATAAAAATCCTTCCCCCGGAGTTTTAGGAATCCAAATCTCTCTGTTACTGTTTCATTCTCCCCAAAAAAAGAAAAAAAAAAATCAAAACACAATTAGTAGTGTTAAATTTGCATTTTTTAGTCCTTGTTACTCTCAATAATTTTTTAGTTTTAAATTTTAGGTCAAATCTTATAAAATGTACTTCCCGTTACTAGATATCAATACTTTTTCATATGACAACGTGATTGAATGGTCCAAATAGAATATGTCAAGTAAGAAAACGGTTAACATGGTAAAGGTCTATACATTTTTTTTTGAAAAATATTTAGACTAGATTAACGTCATAAAAAAATTGTAGTAAGAATGTGAGGAATTAAAAACATTTTGACTTTCTTTTTAGAAAAAATAATGTGATTATGATTTTTTTTTAATTATTTTATTTGGACCATTGATAGATTTCCTTGTCAATGAGTCATTTTTCTCATGAAAAGAAAAAATCTAAAATGAAATTATAAAAAATAAAGGAAAAAAAAGGAATTTAACTATGGTGTTTAATCATGAGCCTCATGAAAGGGAGGGTAATATTATAAATTAAAAATTCTTTTTGTTGATCGATCCAGAATAAGCTTTAAAAACAAAACGAAATAGGGATATATAACTTTATTTCATGTGGAAAATGACGGAATTATCCTTGTTTATGAAGTAATTAAATTTCGTGCGAAGTAGGGGATAATGACTAAAAGGTGAGGATATTTTTGGAATTTGGCAGGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGCGTGTTACGGTACAAGGAGAAAAGGAGGACCCGCCTATTCTCAAAGAAGATCAGATACCAAGTTAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGGTATGTATGTGAATCTGGTGCATCCACCCTCATCTGATTATAGTCTTTTTCTTTTTAGATTAAAATAACATTTTAGACTTCATATAATCATATTTGCGACTCATGTTATTTTAGTCTATATATTTTTAAATATTTAAATTTAATTCATATTTATCGACAAATCTTAAAATTAGTCTTTAGTAGTAGTTTAAAAATAATTTAGTAATTTGGACCATAAAATTTTTAATTTCATCAAATTTGATACTAAATTTATGTAAAGTACTGCAATTTTAATCTTTAATCTAATTTTAGTTAATTCACCTACTTATTTTAACAAAAGAGTTAAAATTCTTAACTCATTAATTTTAATAGAAATTTACACAAATGTATGTTGATCAAATAAAAAATTAACTATTAAATAACATTCTTAAAATTCATAAAATTCAGAAAAGAAAAACTCTAGTGTTGTTTTTCTCTAAATAAATTATCAATTTTATGTGGTATAAATGTTCTATTATTCATTAAATGCATGAGATACGCTCATATTTCCTTTTAGAAAATTGTTATCCATTTACATATTTATTATAAACTTTTAAAAATATGTTCACATATTATATTTCCTTGCATGAAAAAATAATCATTATTTAACTAATTTTATTAAAAATTAACTTCGAATTATTAAATTTAAGATATTTTTTAGTAATATTAAATTTAAGATTTATTAAAAGTAAAAAGACTAAAATTAGAAATTTAAAAATATAGTGACTAAAATTAAACCAACTCCAAAATAAAAAGTGATATTAACCTTTTTTCAAAATCTTGAGAATATGGTTCCTTCTGGCATTGAAATTTTTCCTTGTTTTATTTATTTATTGAGAATACACAAACCAAAACAAACTAATAGACACTATGCTCAACAATAAAAGAGAAATCACGCATAAACTCAGACAAGATCCGATTTAGAATGTGCTCCAACCATAAACAGCTATTCCCCAAAATTTCAGATTGAGCCAAAGAATGTGTTGTTTGATTAGAACTATGAGGCACATATTGAAAGAAAACAACAACGAAAGAAGCACAAAGGCTTCTAATCTCCGATAAAATGTTTGCTTCAATCTGATAAGATGAATCTCAACGAAGCATTTGAATAGATGCTAAAGAATCCGATAGAATACTGACCTTTTGTAAACCCAATCGTCCTGCTAAACAAAGACCTTTGAAAATTGCCTACTAATTCAGCACAAAGAGGACTTAGAGATTGATCCTGAAAACCCTTCAACGCAAATTTAATAACACCAGTTGAAGAATTAACAATCCCACCGAACCCCACTCTCCTCAAGCCCTCTCGACAGGCCGTATCCACTAGAACAACACACATATCATGTCCTGACAAGTCATACCGTAAGACATTCTGGTGAACCAAATTGAATTATCCTTTGGAGTAGAATTGAATTCAAAAATATATTCCTTTATCCATTCACACCACCTATCCATAGAAAAAATAGGAGAATTAAAACAAACATCATTTCGATCACTCTATATTGCCCAAGTAGTTATACAAGCTTGCACGAACTCCTGATTATTCAAATTAGCAATTAACAACAAACAAATATCCAAGCAATTAAATTTTTTAAACTAAGGATTCCACAAACCAGGAAAAAGAACATGCCAAATATTCCTTGCACGGGAACAACAAAATAAAGCATGTGAAACCGTTTCTTCCTTCCTCCTACTGACATTCATCATTCTTCTCTTGAACGACACTTTTGTGGGAAGACAATTATGGCAAGACTTCTACACAAAAATAGCAATCTTACAAGAAACTTGTAGCTTCCACAACATTTTTCACCAAGATAGATTATGGGCAGAGCAGGTACCATTTGTCAACAACCTATCCAAAATGGCACATTTCTAGCCACTTTTGACAGTATACTCCCCCCCCCCCCCCCCCCCCCCCCGAAGTTTCAAAGTGTTAAACCCAACTGTCCTCTCTTCCTGACACACTTAAAGGAATTTTAAGAACCTTTTCCACATCCACAGAAAAAAGACCTCCGCCAATTTATGATAGTCCCATTGGCCCAACGACGTGATGAAATCCGACACCAATGATCCCCATCTTGATGAGGATAGGATATAACTTTGAATTTCGCTGGTCTAGGGATCCAAGAATCCTTAAAGGCTTTTATTGTTTTCCCATTACCAATAGATTTCCTTAGACCTTTGACTAACACATCTCTGCTCCAACACAACCTTTTCCAAACATACAAACCAGATCTAGTCAACCGAGCATCCAAAATTGAACAAATCGGGAAATAACTTCCTTTTCACACTCTACTAACTAAAGAGGAGGGGTTTTGAATCACTCTCCACATTTGTTCGGCTAAAAGTGCTTGATTAAAAGCCTCAAGATTCCTAAAACTTAAGCCACCAAATTCCTTTGGAACAAAAGCTTTTCCTAGTGCATCTAGTGAATTTTCCTAAAGCCTTGAGAGGAACCCCACCAGAATCTAGCACTAACTTTCATAACTTCAATACATAAACTCTTTGGTAGATGAAAACAACTCATCACATAGGTAGGAATCGCTTGCACGACACTTTTAGTTAAAACTTCTTTGGCCCCTATGGACAAAAAGTTATCCTTCCAACCTTGCAAAGTAGCCCAAACACGGTCCAAAACCTGCTTAAAATCGTTCAATCATTCACCTTACTCCATGAGAAAAAAGCTGGAAAATCAAGATAAGAACCCAATCTGGGAACATTCCTAACATTCATAATAGTTCCCAAAAATTGCCTATAATCAAGACTAACATTAGGAGAGAACACCACTATAGACTTTGAAAAGTTGACACTCTGACCAGAAGCAAGCTTATAATCCTGTAATAACGTTTTTAAAGCTCTAAATTCTTGAGCCGTGGCTTTAAGAAAGATCAAACTATCATCCTCAAACAATAAAGGAGTGATAGAGTCACATAAATTTGAAACAGAGATACCAGACAAAAGGCCCCTATCATAAGCCTTATTAATTAATCTAGATAAACCTTCAGCACACAAAAGAAACAAATAAGGAGACAAAGGATCCCCTTATCTCAATCTTCTCGAAAGGAAGATAGATTCATGGGCCACTCCATTGATACAGATAGCAAAAATAGCCATAGTCACACATTTCATTACAAGTTCAACTCAGGAATGATGAATACCCACCTAAGCACAATTTGTTGGAGATAATCCCACTCAACTCTATCATACGTCTTACTCATATCGAGATTCAACACAATATATCCAACATTTTCTTTCTTCTTTTTCAGATAAGAGAGACATTCATGGCTTACAATAATATTATCACTAATAAGACGATCAAGAATAAAAGCAGACTGATTAACTTAGTATTATTAAGGACTACTTTCAATCTATTTGATTAAACTTTTGAGTCACACTTATAGATAACATTGCACAAACTAATAGATAAAAAGAATTTGTCATTGCTTTAAAGGCATAGAAAGTATTAGATTATTACTAGATTCTATTATTGTTATTAAAATGTGAGTAATGAGTTCAAGTAGAAAATGAGAGTATCTGTTTTTTTCAGCATCTTCTTGAAATTGATTTAGTTAGTTACATCAAAATGATCGTATTAATATATTATAGGATAAATATGCCACATTTTGCTAAATTTGAGTGTCTAGATTTTAAGAAAGATGTATAGTGTCTAAACCATGAGATTAGGCTTAAGTTCAATTGTTAAATATATGTTTTTGTCTCTATAATTTTTTTTTTGAAAAAATATTTATTGGTCTCTAAATTTTGAAATTAATTTTCATTTGGTTCTTATGCTTCAAAATGTTTACATTTAATTTTTAAATTTTGAGTTTGGTTTCAATTTAATCCATAGGTTTCATAATGTTACAATTTTACCCTTAGGATTAGGATTTAAGTTTTATTTTAATTGAATTCGTAGGTTTCAAGATTCACACTTTCAACCTCAATTTTTCATTAAATACATATTTTCATTCATTGGTCCTAATGTTGATTAATTAATTAAAAATAGTTATGAACTAAAATTTTAAATTTAATTTTGGTAGTGATGAAAATTAGTAAAAATTAGTTGATTATAGTTATTTTAAATTAATTAATAAATATTAGTGCTAATGTCTAAAAGTGAGTATCTAGTATAAAATTTAAGTTAAAAGTGTAAATATGAAACCTAGATACCAAATTGAAACAAAACTCAAATTTAAGGGTAAAATTGTTACATTTTGAAACCTAAAAACTAAATTGAAACCAAACTCAAAACTTAAGGATTAAATGTGTAATATTTTGAAACCTAGATACCAAATGTAAATTACACTGAAAATCTAGAGACCAAAAATATTTTCAGATATAGCAACGTACAAGGAACTAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTGAGTAGTTGTTTAAAATGACAAAATTGCTAGAAATATTTTTAAATATAGCAAAATGTCACTATCTATCAGTGATAGATTGTGATAGACATCTATCAGTGTCTATCAGGGTAGATGATAATAGTCTATTAATAATAAAATGACATTTTGCTATATTTATAAATATTTCGATTCATTTTGCTATATTTAAAAACAAAAGACTCTTTGACTTATATTATACATCAGTTGCTTAAAATCAAATTAGCCTAAAAAATGTTTTTAATAGTAGTTTAATAATAACACTCAAATGATTAAATTAGGGCTTTTTTAACTTTCAAAACCAAATTTAAAATTAGAATAAACTTTAGGATTCACAAAATTACAAAACTATTTTGGTTTATTTGTACTCTTAGTCATTTTAATCCACATACTTTCAATTTTTTTTTTCTTTCTTCACTTTAGCTTTTATATTTTCAAAACATCAATTTTCTTTACAGCATATTGTTTAAGATGGACCATTTTCATTCATATTTGCAAAACTTTTAACTCCAATTTTATACTCAATGAAAATTCTTTAATACAAAATTTACGATTGCATTTTAAGTAATGTAGTGATTAAAGTATTATGCTAAAATTTTGATTGATGAAAAAGAAAACAAAGAGACAAAAACAATCACTTCTTAAAAGTAAAATGGTCCAAAATAGATGTTTTAAAAGTATACGAACTAAAATGAACAAAAGTTAAAAGTATAGACATAAAAATTGACATTTTAAAAGTACGAGAACAAAAATTGTACTAAAATCAAACCATAGATTATATTTCCACATTGCTAGTGCCTAACATAATTTAACTAGTCAGAATAATTTTAAGAGCAAGGTTTAAATTGATATAGTTTAAATTTAAACCCTAAACTTATAATTATATCAATATAAACTCTGAACTTTTATAAGTGTGTCAATTTAAACCTCAAAACTAATAATTGTATCAATTTAAACCTTGAACTTTCATAAGTGTATCAGTTTAAACCCTTTATCGTGTTTTATTTGGATATGCTTATTAAAATTTAAGGTTTAAATTGATATAGTTTAAATTAATATACTTATACGAAAGTTTAAAATTTAATTGATAAATTATTAGTTAGGGATATAAATTTTTATTATGAGTTAGAAAAATTTGAGTATTAATAGAAAGAGATGATTGAAAAGACGTTTTCCTTTTGGCAGGGGCGATTTGTGAGGAGGCCTAATTCAAGTGCCAGCGAAAAGAGATAGACAGTAGCCTTTAGGATTCAGAAATCCCCTTTTTGAGTTGTCAACTTCACTTTTTTGGGAGCTACTTTTTTGCTTTCTTGATCTAATTATTATCACTTTTTCTTTTCTCTTTTATTTTGCATTATATTTTCCAAATTTTCCATTATTAGTTTGCTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTCCCAATTCCAAAAAGCTCAATGAGAAAATGGCCACTAAGTAGATGGTCAGAGATCCAATAATTCAAGGCTTTTTTTTTTTCTTTTCTTTTTTTGCTTCTAAATTCTAATATATGTATTTTCCTTTTTGGGGCTTTTGTTTTATAGTGTTTGGTTGATAGTTTCTAATGCTTTGAGAAGAGGCTCATATGTTTTGAATTGCCTCCATTTGTGTAATTTGCAACTTATTAAATTTGGAAATTTGTGGTTTAAAGGTAATCAAACATTATATATTTAAAAACTTACCTGAATTCTTAACTTTCAATTTTATACAATTTTATTCTCCACACAATACTCTTTGAATGGCAAAAAATATAAGGGTATTTATAAATTTTGTAAATATAGCAAAATTTTAAAAACAATATATATAGCACGGAAGAAGAAGAGTCACTATTTCATGTGTTATTATTAGGTAGTCCTTCGAATAGAATGAATTCTGGAGAAAAATAAAGAAAAAAAGAAATATATTTCATAAGAATTATTTCTTTTTAAAAAATTAATACCACAAGAAGGGAAAAAATAAATGGCATAATCAAGAGAAGAATGGAAAGACATGCAATATAAAATAATAAAATAAAGAAACATTTGTTTAACTCTATCAAGAAAAGAAGTGTACAAATCATGATAATCAAATAAAAAATCTAAAAAAAATAAAAATAAGATAATGATAATATAAATACATTAAAATAGGATTAACAGGAACTATTGCAAAGAGATATAAAAGCAAATAGTCATTATTTAAAGATTTAAGGACAAAGTGGGAATGTTAAAATTCTCCCATTTGAATATAGTAAAGATATAGATAAAATGGATACAAGAAAAATTCAAAAGTTTATCCACTTATATATATATATATATATATATATATATGTTATTTGTGCGAATTTTTCAACTCTATTTTATAAATTTACTTACTAGAAATTTAAAATTTAGATTCTTTTTATTCTTCAAATTTTTTATTAGAAAAAAATACACTTTTTAGTCTATGCATTTTATATTTTAGTACAAAAATTTTAAGTTTAATAGCACCTTTGGTCCTTCCAATTAATTTTATATTAATTATGTAATAAAAGTTGATGTGACACTATTAGATTACTAAGAAAATCATATTTAATAAATTCTAAAATAAAAATATATTTTTATCATTGTTTAAGTAAAGTTTATTATTATTATTATTCTCTTTCTCTTCATCTTCATCTTCCTCTTCTTCTTCTTCTCGTCCTCATCTTCTCGTCCTCCTCCTCCTCTTCCCCTTCCTCCTCCTCTTTAATGGTCGATGGCTAGGGGCGAAGGGAAATTTTCATTGGTTTCGAAATGCCTCTCAATCTTTTTCTTTCCGAATTTAGAAAAGAATGGGAAAGATAGGACCAAATGGAGAAAGACAAAAAATGAGAGAACAAAATAAGAAAACTAAAAAAAAAAAAAAAAAGTTATCCATTGAAGAGGAAGGGAGAAGGAAGATGAGTAAGGGGAAGAGGAAGATGAAGAGGAAGAAAGAGATTAAAAAAAAAAAAAAAAAAAAGGAGGAAAAGTAAGGTTCATTTTATTTTAAAAAAATGACAAAGTATATTTTGCAACCAATTAAATTGTGTATAGAGTAAAGGGAGCATGAGACTTAGATATAACTTAGGCTACACTTAAATATTGCTATTTTTATTTTAATTTTTTTAAAAAAAAAATATGATTTTTTTGAAAAAATATATATTAATGTCACTTCAACTTCTATTACATAATTAACAAAAAGTTGATGGCGCAGGGTCTTCTAAAGATTCCTTCTCTCATGTGGGTGCCATTATCAGAGATTTTTGGGTCTGATATTTCATCATCATGTAGCTTCTTCGATCCCCTTTAGAGTCATGTTTTGGTGGAAATGGCTGCTATTCTTCATGGTGTGGATTTGGCTATTAACCTTAATCTTCTTCACCTTCAGATTGAGTCTGATTCTGATTCTCTTGTTGCAGTCAAATTTCTCAATAGAATTACTTCCTATAGGAATGAAATTGGTGTTTGGTGTGAGAAAATTTAA

mRNA sequence

ATGTCTTCTCCATGTATAAGTGGCGGTGGGAGAGCTTACAATTTCGACTTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCACAAACTTCATCGCCTTCTTCAACTTTATCTGATTCAAGCAACAACACACAGCTTGCAATTTCCACTAGAAAATCCAGAACTCCTCGAAAACGCCCAAATCAAACCTACAATGAGGCTACAGTTTTGCTCTCAACGGCATATCCAAATGTTTTTTCCACTAAACATCTCACAAATCCGCGAAAATTCACCAAATCACATGATGATTCTCTCTTCTGTGAATCCGCTGAATTGCTTTTGCCTTTTCGAGTAATCGATAGTTCTGGATTTCTCCTTCACCAACCGTTGCTTCAAGAAAAACCTAATTCCCAAACTCAATCCAAATTGACGAATCTTTGGGAAAATCGGCCGTGTTCCAGCCCAGGAGAGATCGATTTCCAACCGAATTTGATGGAGATTGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAAAAGGTAATTCAACGCAAGATTCTTGTGTGAATAATCATCCTCGGAATTGGAATTGCTATTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATCTGGCTTCGGAATGCGGAAGGGAATCGAACGAACAGCAATCCGAGGAGTCGATAACGGAAACTGGTGGCGATTTCCTACTGTCGACGTAGTCGAAATCTCTCCAAAACTAAATCCAAAGCCACCGGCTCCGGCTCCATCACCGGCCGCCGTCGCGACAAAGAAGAAGAAAAAGAAAGTGGAGAAACTTACAGTAATCGAATCGAAGAAAGCAGCAATGCCACTACAAAAGGAGAAATCAGAGAAATCAGAGAAGCCGATTCCGAAATCGAAACCTACTGGATTTCTGAAATTGAACTACGAAGCCGTCGCCGACGCTTGGTCTAGCCGAGGATCTCCATTTTCCGATGAGATTCCGGGATCCGATACGGCGGGAAGTGATGTAAATGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGCGTGTTACGGTACAAGGAGAAAAGGAGGACCCGCCTATTCTCAAAGAAGATCAGATACCAAGTTAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGAGTCATGTTTTGGTGGAAATGGCTGCTATTCTTCATGGTGTGGATTTGGCTATTAACCTTAATCTTCTTCACCTTCAGATTGAGTCTGATTCTGATTCTCTTGTTGCAGTCAAATTTCTCAATAGAATTACTTCCTATAGGAATGAAATTGGTGTTTGGTGTGAGAAAATTTAA

Coding sequence (CDS)

ATGTCTTCTCCATGTATAAGTGGCGGTGGGAGAGCTTACAATTTCGACTTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCACAAACTTCATCGCCTTCTTCAACTTTATCTGATTCAAGCAACAACACACAGCTTGCAATTTCCACTAGAAAATCCAGAACTCCTCGAAAACGCCCAAATCAAACCTACAATGAGGCTACAGTTTTGCTCTCAACGGCATATCCAAATGTTTTTTCCACTAAACATCTCACAAATCCGCGAAAATTCACCAAATCACATGATGATTCTCTCTTCTGTGAATCCGCTGAATTGCTTTTGCCTTTTCGAGTAATCGATAGTTCTGGATTTCTCCTTCACCAACCGTTGCTTCAAGAAAAACCTAATTCCCAAACTCAATCCAAATTGACGAATCTTTGGGAAAATCGGCCGTGTTCCAGCCCAGGAGAGATCGATTTCCAACCGAATTTGATGGAGATTGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAAGGAATCGATAGTATCATGGGGAATCTGAGTGTGGATAACCTAGAAAAAGGTAATTCAACGCAAGATTCTTGTGTGAATAATCATCCTCGGAATTGGAATTGCTATTGGAATCCAATCGGCTTAGGGTTCAACCAGAAATTCGAATCTGGCTTCGGAATGCGGAAGGGAATCGAACGAACAGCAATCCGAGGAGTCGATAACGGAAACTGGTGGCGATTTCCTACTGTCGACGTAGTCGAAATCTCTCCAAAACTAAATCCAAAGCCACCGGCTCCGGCTCCATCACCGGCCGCCGTCGCGACAAAGAAGAAGAAAAAGAAAGTGGAGAAACTTACAGTAATCGAATCGAAGAAAGCAGCAATGCCACTACAAAAGGAGAAATCAGAGAAATCAGAGAAGCCGATTCCGAAATCGAAACCTACTGGATTTCTGAAATTGAACTACGAAGCCGTCGCCGACGCTTGGTCTAGCCGAGGATCTCCATTTTCCGATGAGATTCCGGGATCCGATACGGCGGGAAGTGATGTAAATGCCAGGCTGGCGCAGATTGATTTATTTTCGGACGGTGGAGGATTATTGAGAGAAGCCAGCGTGTTACGGTACAAGGAGAAAAGGAGGACCCGCCTATTCTCAAAGAAGATCAGATACCAAGTTAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGAGTCATGTTTTGGTGGAAATGGCTGCTATTCTTCATGGTGTGGATTTGGCTATTAACCTTAATCTTCTTCACCTTCAGATTGAGTCTGATTCTGATTCTCTTGTTGCAGTCAAATTTCTCAATAGAATTACTTCCTATAGGAATGAAATTGGTGTTTGGTGTGAGAAAATTTAA

Protein sequence

MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAESILDEEIEEGIDSIMGNLSVDNLEKGNSTQDSCVNNHPRNWNCYWNPIGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKSHVLVEMAAILHGVDLAINLNLLHLQIESDSDSLVAVKFLNRITSYRNEIGVWCEKI

Homology

[Close]

BLAST of HG10006175 vs. NCBI nr
Match: XP_038890140.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 741.5 bits (1913), Expect = 4.4e-210
Identity = 396/433 (91.45%), Postives = 405/433 (93.53%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKS- 420
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK  
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKGC 420

Query: 421 HVLVEMAAILHGV 423
            + +EM  I   +
Sbjct: 421 RLHIEMRIIAFSI 432

[Close]

BLAST of HG10006175 vs. NCBI nr
Match: XP_038890142.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X3 [Benincasa hispida])

HSP 1 Score: 741.5 bits (1913), Expect = 4.4e-210
Identity = 394/424 (92.92%), Postives = 401/424 (94.58%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKSH 415
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK  
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKVW 420

[Close]

BLAST of HG10006175 vs. NCBI nr
Match: XP_038890141.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 741.1 bits (1912), Expect = 5.8e-210
Identity = 393/418 (94.02%), Postives = 399/418 (95.45%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 417

[Close]

BLAST of HG10006175 vs. NCBI nr
Match: XP_038890143.1 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X4 [Benincasa hispida])

HSP 1 Score: 741.1 bits (1912), Expect = 5.8e-210
Identity = 393/418 (94.02%), Postives = 399/418 (95.45%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNNTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQ-PLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDEEI 180
           LLHQ PL+ E+PNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDEEI
Sbjct: 121 LLHQPPLVHERPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDEEI 180

Query: 181 EEGIDSIMGNLSVDNLEKGNSTQDSC--VNNHPRNWNCYWNPIGLGFNQKFESGFGMRKG 240
           EEGIDSIMGNLSVDNLE GNSTQDSC  VNNHPRNWNCYW+PIGLGFNQKFESGFGMRKG
Sbjct: 181 EEGIDSIMGNLSVDNLETGNSTQDSCVNVNNHPRNWNCYWSPIGLGFNQKFESGFGMRKG 240

Query: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIES 300
           IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPP PAP+P+AVATKKKKKKVEKLTVIES
Sbjct: 241 IERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPVPAPAPSAVATKKKKKKVEKLTVIES 300

Query: 301 KKAAMPLQK---EKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           KKAAMPLQK   EKSEKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIPGSDTA
Sbjct: 301 KKAAMPLQKEKLEKSEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK
Sbjct: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 417

[Close]

BLAST of HG10006175 vs. NCBI nr
Match: XP_008451201.1 (PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 719.2 bits (1855), Expect = 2.4e-203
Identity = 386/423 (91.25%), Postives = 394/423 (93.14%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLE GNSTQDSCV  NNH RNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQKEKSEKSEKPIPK KP G  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 409
            SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420

[Close]

BLAST of HG10006175 vs. ExPASy Swiss-Prot
Match: Q9LU68 (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 4.3e-67
Identity = 200/444 (45.05%), Postives = 259/444 (58.33%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

Query: 363 NYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRR 409
           +Y+ V +AWS + SPF DEI GS+    DVNARLAQIDLF D G  +REASVLRYKEKRR
Sbjct: 362 DYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRR 419

[Close]

BLAST of HG10006175 vs. ExPASy Swiss-Prot
Match: Q8LG76 (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 8.9e-12
Identity = 49/120 (40.83%), Postives = 64/120 (53.33%), Query Frame = 0


Query: 305 KSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIP---------------GSDT 364
           K EK EK +        L+L+YE+V   W  +G P++  +P               G   
Sbjct: 281 KEEKKEKAL-------MLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESG 340

Query: 365 AGSDVNARLAQIDL-FSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           A +  +     + L   D G   REA V RY+EKRRTRLFSKKIRY+VRK+NA+ RPRMK
Sbjct: 341 AEAHHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMK 393

[Close]

BLAST of HG10006175 vs. ExPASy Swiss-Prot
Match: Q9C9A9 (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.8e-11
Identity = 56/133 (42.11%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 293 ESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP-----G 352
           E ++A       K    E    K + T  FL+L+Y AV  AW + GSP+   I      G
Sbjct: 249 EEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLG 308

Query: 353 SDTAGSDVNARLAQI---------DLFSDGGGL--LREASVLRYKEKRRTRLFSKKIRYQ 409
            +T    V     ++             DGGG    REA VLRYKEKRRTRLFSKKIRY+
Sbjct: 309 GNTCLPHVVGGYEKLMSSDGSVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYE 368

[Close]

BLAST of HG10006175 vs. ExPASy Swiss-Prot
Match: Q8RWD0 (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 4.9e-10
Identity = 55/165 (33.33%), Postives = 73/165 (44.24%), Query Frame = 0


Query: 282 KKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFS 341
           K  + E +  +ES    +   KE+  K+            L+LNY++V   W  +G P+S
Sbjct: 264 KTSEEEVMKNVESSGECVVKVKEEEHKN---------VLMLRLNYDSVISTWGGQGPPWS 323

Query: 342 DEIP-------------------GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEK 401
              P                   G  T              F DGG   REA V RY+EK
Sbjct: 324 SGEPPERDMDISGWPAFSMVENGGESTHQKQYVGGCLPSSGFGDGG---REARVSRYREK 383

Query: 402 RRTRLFSKKIRYQVRKVNADGRPRMKSHVLVEMAAILHGVDLAIN 428
           RRTRLFSKKIRY+VRK+NA+ RPRMK   +   +       L +N
Sbjct: 384 RRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASLAAAASPLGVN 416

[Close]

BLAST of HG10006175 vs. ExPASy Swiss-Prot
Match: Q9M9B3 (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 7.0e-09
Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 0


Query: 306 SEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFS 365
           SEK+E+     +     +LNYE V  AW  + SP        D   +  + +L    +  
Sbjct: 212 SEKTEEIEDCYENNARHRLNYENVIAAWDKQESP-------RDVKNNTSSFQLVPPGIEE 271

Query: 366 DGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMKSHVLVEMAAI 419
                 REA V RY++KR+ RLF KKIRY+VRKVNAD RPRMK   +    AI
Sbjct: 272 KRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRSLAI 317

[Close]

BLAST of HG10006175 vs. ExPASy TrEMBL
Match: A0A1S3BQX8 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 1.1e-203
Identity = 386/423 (91.25%), Postives = 394/423 (93.14%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLE GNSTQDSCV  NNH RNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQKEKSEKSEKPIPK KP G  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 409
            SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420

[Close]

BLAST of HG10006175 vs. ExPASy TrEMBL
Match: A0A1S3BQD2 (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 719.2 bits (1855), Expect = 1.1e-203
Identity = 386/423 (91.25%), Postives = 394/423 (93.14%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLE GNSTQDSCV  NNH RNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPAPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQKEKSEKSEKPIPK KP G  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 409
            SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 420

[Close]

BLAST of HG10006175 vs. ExPASy TrEMBL
Match: A0A0A0LGV4 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 4.8e-202
Identity = 384/423 (90.78%), Postives = 394/423 (93.14%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNN-TQLAISTRKSRTP 60
           MSSPCISGGGRAYNFDLEI+KSPSSSWTRTSQTSSPSSTLS+SSNN TQLAISTRK RTP
Sbjct: 1   MSSPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD--SLFCESAELLLPFRVIDS 120
           RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDD  SLFCESAELLLPFRVIDS
Sbjct: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDS 120

Query: 121 SGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLM---EIEDFDAESILDE 180
           SGFLLHQPLL+EKPNSQ  SKLTNLWENRPCSSPGEIDFQPN M   EIEDFDAESILDE
Sbjct: 121 SGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILDE 180

Query: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCV--NNHPRNWNCYWNPIGLGFNQKFESGFGMR 240
           EIEEGIDSIMGNLSVDNLEKGNSTQDSCV  NNHPRNWN  WNPIGLGFNQKFESGFG R
Sbjct: 181 EIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWN--WNPIGLGFNQKFESGFGFR 240

Query: 241 KGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPA------PSPAAVATKKKKKKV 300
           KGIERTAIRGVDNGNWWRFPTVDV+EISPKLNPKPPAPA      P+PAAV+TKKKKKKV
Sbjct: 241 KGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPKPPAPAPTPTPTPTPAAVSTKKKKKKV 300

Query: 301 EKLTVIESKKAAMPLQKEKSEKSEKPIPKSKPTG-FLKLNYEAVADAWSSRGSPFSDEIP 360
           EKLTVIESKKAA+PLQK   EKSEKPIPK KPTG  LKLNYEAVADAWSSRGSPFSDEIP
Sbjct: 301 EKLTVIESKKAAIPLQK---EKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIP 360

Query: 361 GSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 409
            SDTAGSDVNAR+A IDLF++GGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP
Sbjct: 361 SSDTAGSDVNARVANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRP 418

[Close]

BLAST of HG10006175 vs. ExPASy TrEMBL
Match: A0A6J1K6B9 (protein CHLOROPLAST IMPORT APPARATUS 2 OS=Cucurbita maxima OX=3661 GN=LOC111492075 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.6e-181
Identity = 351/410 (85.61%), Postives = 367/410 (89.51%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSS-NNTQLAISTRKSRTP 60
           MSSPCISGGGRAY+FDLEIVKSPSSSWTRTSQ+SSPSSTLS+SS NNTQLAISTRKSRTP
Sbjct: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRTSQSSSPSSTLSESSNNNTQLAISTRKSRTP 60

Query: 61  RKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSG 120
           RKRPNQTYNEAT+LLSTAYPNVFS KHLTNPRKFTKSH DSLF +SAELLLPFR IDSS 
Sbjct: 61  RKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSH-DSLFSDSAELLLPFRGIDSSE 120

Query: 121 FLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAESILDEEIEEG 180
           FL+HQPL  EKPNSQ  SKL NLWENRPCSSPGE+DFQP+ ME+EDFDAESILDEEIEEG
Sbjct: 121 FLIHQPL--EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEG 180

Query: 181 IDSIMGNLSVDNLEKGNSTQDSCVNNHPRNWNCYWNPIGL-GFNQKFESGFGMRKGIERT 240
           IDSI+GNL VDNLE G+S QDSC NNHP NWNC WNPIGL GFNQKFESG+    GIERT
Sbjct: 181 IDSILGNLCVDNLETGDSVQDSCANNHPWNWNCCWNPIGLGGFNQKFESGY----GIERT 240

Query: 241 AIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLTVIESKKAA 300
           AIR VDNGNWWRFPTVDVVEISPKLNPKPPA    P+AVATKKKKKKVEKLTVIESKKAA
Sbjct: 241 AIREVDNGNWWRFPTVDVVEISPKLNPKPPA----PSAVATKKKKKKVEKLTVIESKKAA 300

Query: 301 MPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARL 360
           M  +K   EKSEKPIPK      LKLNYEAVADAWS+RGSPFSDE P SDTAGSDVNARL
Sbjct: 301 MAPEK---EKSEKPIPKGL---VLKLNYEAVADAWSNRGSPFSDEFPASDTAGSDVNARL 360

Query: 361 AQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           A IDLFSDGGG LREASVLRYKEK+RTRLFSKKIRYQVRKVNADGRPRMK
Sbjct: 361 ALIDLFSDGGGFLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMK 393

[Close]

BLAST of HG10006175 vs. ExPASy TrEMBL
Match: A0A6J1D908 (protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC111018157 PE=4 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 1.0e-180
Identity = 353/418 (84.45%), Postives = 366/418 (87.56%), Query Frame = 0


Query: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPR 60
           MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLS+SS NTQLAISTRKSRTPR
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTRTSQTSSPSSTLSESS-NTQLAISTRKSRTPR 60

Query: 61  KRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGF 120
           KRPNQTYNEATVLLST YPNVFSTKHLTNPRKFTK H DSLFCESAELLLPFRVIDSSGF
Sbjct: 61  KRPNQTYNEATVLLSTVYPNVFSTKHLTNPRKFTKPH-DSLFCESAELLLPFRVIDSSGF 120

Query: 121 LLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEI-------EDFDAESILD 180
           LLHQPLLQEKPNSQ Q+KL NLWE RPCSSPGEIDFQPN MEI       +DFDAESILD
Sbjct: 121 LLHQPLLQEKPNSQIQTKLANLWEGRPCSSPGEIDFQPNSMEIDGGCGQDDDFDAESILD 180

Query: 181 EEIEEGIDSIMGNLSVDNLEKGNSTQD-SCVNNHPRNWNCYWN--PIGLGFNQKFESGFG 240
           EEIEEGIDSIMGNLSVDNLE  NS QD SC N  PRNWNCYWN  PIGLG NQKFE GFG
Sbjct: 181 EEIEEGIDSIMGNLSVDNLETANSPQDYSCTN--PRNWNCYWNNPPIGLGLNQKFEFGFG 240

Query: 241 MRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAAVATKKKKKKVEKLT 300
           M+K  ER AIR V++GNWWRFPTVDVVEISPKLN KPPA    PAAV+TKKKKKK+EKLT
Sbjct: 241 MQKATERAAIRQVEDGNWWRFPTVDVVEISPKLN-KPPA----PAAVSTKKKKKKMEKLT 300

Query: 301 VIESKKAAMPLQKEKSEKSEKPIPKSKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTA 360
           VIE+KKAA   QK+     +KP PKSKP   LKLNYEAVADAWS RGSPFSDEIPGSDTA
Sbjct: 301 VIETKKAATIPQKD-----QKPTPKSKPGLLLKLNYEAVADAWSDRGSPFSDEIPGSDTA 360

Query: 361 GSDVNARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           G+DVN RLAQ+DLF D GGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNAD RPRMK
Sbjct: 361 GNDVNTRLAQVDLFLDSGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADERPRMK 404

[Close]

BLAST of HG10006175 vs. TAIR 10
Match: AT5G57180.2 (chloroplast import apparatus 2 )

HSP 1 Score: 256.9 bits (655), Expect = 3.1e-68
Identity = 200/444 (45.05%), Postives = 259/444 (58.33%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

Query: 363 NYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRR 409
           +Y+ V +AWS + SPF DEI GS+    DVNARLAQIDLF D G  +REASVLRYKEKRR
Sbjct: 362 DYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRR 419

[Close]

BLAST of HG10006175 vs. TAIR 10
Match: AT5G57180.1 (chloroplast import apparatus 2 )

HSP 1 Score: 256.9 bits (655), Expect = 3.1e-68
Identity = 200/444 (45.05%), Postives = 259/444 (58.33%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

Query: 363 NYEAVADAWSSRGSPFSDEIPGSDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKRR 409
           +Y+ V +AWS + SPF DEI GS+    DVNARLAQIDLF D G  +REASVLRYKEKRR
Sbjct: 362 DYDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRR 419

[Close]

BLAST of HG10006175 vs. TAIR 10
Match: AT4G25990.1 (CCT motif family protein )

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-64
Identity = 177/414 (42.75%), Postives = 239/414 (57.73%), Query Frame = 0


Query: 12  AYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPRKRPNQTYNEAT 71
           AY+F+LE++KSP S     + T SPSST+S+ +N+   +ISTR+ RTPRKRPNQTY+EA 
Sbjct: 5   AYSFELEMMKSPPS-----NNTPSPSSTISE-TNSPPFSISTRRPRTPRKRPNQTYDEAA 64

Query: 72  VLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGFLLHQPLLQEKP 131
            LLSTAYP +FS+K        T     S + E+++LLLP+  I+ + FL          
Sbjct: 65  ALLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF--------- 124

Query: 132 NSQTQSKLTNLWENRPCSSPGEIDFQPN-LMEIEDFDAESILDEEIEEGIDSIMGNLSVD 191
           N    +K  +  E +  S     D + N    ++DFDAESILDEEIEEGIDS MGN+  +
Sbjct: 125 NPTIPTKTEHFLEQKEVSFD---DLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNIESN 184

Query: 192 NLEKGNSTQDSCVNNHPRNWNCYWNPIGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWR 251
           + ++ N  +   +    +N           +N +F  G G+     R+++R  ++ NWW+
Sbjct: 185 DGDRENCYRVGRLEEIMKN----------AWNGRFRLGLGL-----RSSLRQNNDENWWK 244

Query: 252 FPTVDVVEISPKLNPKPPAPAPS--------------PAAVATKKKKKKVEKLTVIESKK 311
           FPTV+  +ISP++     A A                  A   KKKKKK +K      KK
Sbjct: 245 FPTVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKK------KK 304

Query: 312 AAMPLQKEKSEKSEKPIPK--SKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDV 371
            A    + KS +     PK   + +  LKL+Y+ V +AWS + SPFSDEI GSD  G D 
Sbjct: 305 VAPAAAESKSSEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDF 364

Query: 372 NARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           + RL +IDLF + G  +REASVLRYKEKRR RLFSKKIRYQVRK+NAD RPRMK
Sbjct: 365 HVRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMK 377

[Close]

BLAST of HG10006175 vs. TAIR 10
Match: AT4G25990.2 (CCT motif family protein )

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-64
Identity = 177/414 (42.75%), Postives = 239/414 (57.73%), Query Frame = 0


Query: 12  AYNFDLEIVKSPSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRTPRKRPNQTYNEAT 71
           AY+F+LE++KSP S     + T SPSST+S+ +N+   +ISTR+ RTPRKRPNQTY+EA 
Sbjct: 5   AYSFELEMMKSPPS-----NNTPSPSSTISE-TNSPPFSISTRRPRTPRKRPNQTYDEAA 64

Query: 72  VLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFCESAELLLPFRVIDSSGFLLHQPLLQEKP 131
            LLSTAYP +FS+K        T     S + E+++LLLP+  I+ + FL          
Sbjct: 65  ALLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF--------- 124

Query: 132 NSQTQSKLTNLWENRPCSSPGEIDFQPN-LMEIEDFDAESILDEEIEEGIDSIMGNLSVD 191
           N    +K  +  E +  S     D + N    ++DFDAESILDEEIEEGIDS MGN+  +
Sbjct: 125 NPTIPTKTEHFLEQKEVSFD---DLEVNGFGVLDDFDAESILDEEIEEGIDSFMGNIESN 184

Query: 192 NLEKGNSTQDSCVNNHPRNWNCYWNPIGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWR 251
           + ++ N  +   +    +N           +N +F  G G+     R+++R  ++ NWW+
Sbjct: 185 DGDRENCYRVGRLEEIMKN----------AWNGRFRLGLGL-----RSSLRQNNDENWWK 244

Query: 252 FPTVDVVEISPKLNPKPPAPAPS--------------PAAVATKKKKKKVEKLTVIESKK 311
           FPTV+  +ISP++     A A                  A   KKKKKK +K      KK
Sbjct: 245 FPTVEFDQISPRIQTTAAAAADDGQSNVVDSSKIKTIVTAEGDKKKKKKKKK------KK 304

Query: 312 AAMPLQKEKSEKSEKPIPK--SKPTGFLKLNYEAVADAWSSRGSPFSDEIPGSDTAGSDV 371
            A    + KS +     PK   + +  LKL+Y+ V +AWS + SPFSDEI GSD  G D 
Sbjct: 305 VAPAAAESKSSEVTDSNPKLEQRVSPLLKLDYDGVLEAWSGKESPFSDEILGSDADGVDF 364

Query: 372 NARLAQIDLFSDGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPRMK 409
           + RL +IDLF + G  +REASVLRYKEKRR RLFSKKIRYQVRK+NAD RPRMK
Sbjct: 365 HVRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMK 377

[Close]

BLAST of HG10006175 vs. TAIR 10
Match: AT5G57180.3 (chloroplast import apparatus 2 )

HSP 1 Score: 177.2 bits (448), Expect = 3.1e-44
Identity = 156/397 (39.29%), Postives = 213/397 (53.65%), Query Frame = 0


Query: 3   SPCIS---GGGRAYNFDLEIVKS-PSSSWTRTSQTSSPSSTLSDSSNNTQLAISTRKSRT 62
           S C+S   GG  AY+F+LE VKS P SS T T++ +SPSST+S+SS N+ LAISTRK RT
Sbjct: 2   SACLSSGGGGAAAYSFELEKVKSPPPSSSTTTTRATSPSSTISESS-NSPLAISTRKPRT 61

Query: 63  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSLFC--------ESAELLL 122
            RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K T S  +S F         ++++LLL
Sbjct: 62  QRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQK-THSSSNSHFYGPLLSDNDDASDLLL 121

Query: 123 PFRVIDSSGFLLHQPLLQEKPNSQTQSKLTNLWENRPCSSPGEIDFQPNLMEIEDFDAES 182
           P+  I+   FL H P +Q K    +  K  N   +       + DF       ++FDAES
Sbjct: 122 PYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYGGEIEKFDFS------DEFDAES 181

Query: 183 ILDEEIEEGIDSIMGNLSVDNLEKG--NSTQDSCVNNHPRNWN------------CYWNP 242
           ILDE+IEEGIDSIMG +   N   G   S     +N   R+ +              WN 
Sbjct: 182 ILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMMMINSWNR 241

Query: 243 IGLGFNQKFESGFGMRKGIERTAIRGVDNGNWWRFPTVDVVEISPKLNPKPPAPAPSPAA 302
              GFN  F  G G+     R+A+R  D+   W+  TVD  +ISP++         +  A
Sbjct: 242 SSNGFN--FPLGLGL-----RSALRENDDTKLWKIHTVDFEQISPRIQ-----TVKTETA 301

Query: 303 VATKKKKKKVEKLTVIESKKAAMPLQKEKSEKSEKPIPKSKP-----------TG-FLKL 362
           ++T  ++K   K  VI  +K+    +K+K   +   I +SK            TG  LKL
Sbjct: 302 ISTVDEEKSDGKKVVISGEKSNKKKKKKKMTVTTTLITESKSLEDTEETSLKRTGPLLKL 361

The following BLAST results are available for this feature:

BLAST of HG10006175 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890140.1	4.4e-210	91.45	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Benincasa hispida]	[more]
XP_038890142.1	4.4e-210	92.92	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X3 [Benincasa hispida]	[more]
XP_038890141.1	5.8e-210	94.02	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 [Benincasa hispida]	[more]
XP_038890143.1	5.8e-210	94.02	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X4 [Benincasa hispida]	[more]
XP_008451201.1	2.4e-203	91.25	PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis melo]	[more]

BLAST of HG10006175 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LU68	4.3e-67	45.05	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
Q8LG76	8.9e-12	40.83	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
Q9C9A9	5.8e-11	42.11	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
Q8RWD0	4.9e-10	33.33	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
Q9M9B3	7.0e-09	39.82	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of HG10006175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQX8	1.1e-203	91.25	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A1S3BQD2	1.1e-203	91.25	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0LGV4	4.8e-202	90.78	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV...	[more]
A0A6J1K6B9	1.6e-181	85.61	protein CHLOROPLAST IMPORT APPARATUS 2 OS=Cucurbita maxima OX=3661 GN=LOC1114920...	[more]
A0A6J1D908	1.0e-180	84.45	protein CHLOROPLAST IMPORT APPARATUS 2 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of HG10006175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57180.2	3.1e-68	45.05	chloroplast import apparatus 2	[more]
AT5G57180.1	3.1e-68	45.05	chloroplast import apparatus 2	[more]
AT4G25990.1	1.6e-64	42.75	CCT motif family protein	[more]
AT4G25990.2	1.6e-64	42.75	CCT motif family protein	[more]
AT5G57180.3	3.1e-44	39.29	chloroplast import apparatus 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 372..408 e-value: 8.0E-14 score: 51.5
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 372..414 score: 13.195303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..54
None	No IPR available	PANTHER	PTHR31874	CCT MOTIF FAMILY PROTEIN, EXPRESSED	coord: 1..410
None	No IPR available	PANTHER	PTHR31874:SF10	OS02G0148000 PROTEIN	coord: 1..410

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10006175.1	HG10006175.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding