HG10005913 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005913
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	PHD finger protein EHD3-like
Location	Chr07: 8274710 .. 8278087 (-)
RNA-Seq Expression	HG10005913
Synteny	HG10005913

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAATTTAGATGCGTCTCCTGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATGCCAGTCGTCAGGTGTCAATGGAGGCAATGTACCAACGTGTGTCCAGGATGGCCTTGCTTCTCATTCAGGAACCAATGACCGCTCAAGATTTAGGGTTAGCTCCGAATATGTTTTTCAAGTTGATCTTGTGATGAGATCTTTTTCTTTTCTTTTGGTTCAGTTTTTAGATCACCCTTGTTCACCCCCTGTAATTGTTGTGCAGAAATTTGATGTTCAAGATGCAAACAGCAATAATGACCTTGCACGTACTGGATTAGTGTCTAGTGCAGTTCAGATGGCATCTCATAGAGAAAATGGTGATGTATCAAATGGATCATTAGAAAATTCAAACAGATGTAGTGTCAACGAGAGTTGCAAGCGAGCTTTCTATAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATGTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAATTCACCCATGCTCTTCCTCTCTGACGTACAACAGGCAATATTTGATTATCTTGTTTCACTTTTTATTGTTACTTTATCTTACATTTTTGCTGAATTGCATGTGGAACTATTTATTAAATCACAAGTGCTTATAAATGAATAAATATATATTTCTGGAGAAATGATAATCAACTTAATGTTTTCCTTCTCCCATTTTTTTCTTCCCTTTTTTCATTAGTAATGCCTGCTTCTTTTCCCTATTTCTGTCGGTCCCTAATGTCTATTTCAGCAGACATTCAAACACACCGTTTTCTTCTCATTGTATTTTCATTGTTCATATTGAAGAAAGCTTGTATAAAATTGTTTGTTTTCTTTATTGCACTTTTGTTTTCTTAGATTTCATCCGGATTATTGCGCCAAATATGCTTTTCCCCATTTCCTGATTTCTAAACTTGTGGAAGTTTTACTATTTGTTGGTGTTGGAATTGTATTTTCAACCACAGCTGTACTCTTACTTTTTCTTGATTTGCCATTATATAACAGTTGATGTTTGATTTTCTGCAGATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAATGCCTCTCAGACTTTTCTAGAACTACCTATCGAGAAAAGGTGAAAACGAGTATCTTCAGCGGTTGATATGATGCTATATAAATTGTAGACTATATGTTTTAGTCATCTCTATCCTACTTTCTTTTTAAGAAATGCTATCTGGTTTGGTCTTCAATCTTTTGTGGTTTCTATTAGTTTTCGACCCTTCTATCTTAGATTTTCTTATAGCTTTCAACCTTGCAGGTGGGAGTTTCAGGGTGCAATGTATTTGAAGATGGAAAGCACGAGGTAAAAGAGTTTGTATTATGTCGCATTTTGTATTATTCTATTAAAAAATTGTACAAAAATTTATTAAATATTGCTTGACAAATATATGAGAAAAGGAGGATTGAAGCCTTAAGACATAGATACCACATAGTTTGGGTGTTGGTTAACTAGATCGTATTTAAATTTCATTTAGTGAACTTTGTCTATTCAAATTAAGTTCTCCTGTAATTGTAGGTTAAGTTTTAGACTATTTGTACATTCCTTGAATTGAGTATTGAAGCCTCAAGACAGAGACTCTTTGGGTACTGTTTCCTTATAAGCCCACCAACTTTTAGTTCTTTAAAAATTGTATATTTCACATGTCTGTGCTTGTGTCTTGTTTGAGATACAGATATTCATTTTTTGGTTGGCTTCTTTTCTCTTGTATGGTTATCTCTCACTCTGTAGGTTCTGTACAGTTGAAAGGTTCTGACTTTTGCCTCTTCTATTTCTCCTTTTTTATATTCTATATTAAGGGCTCTTCTTAGCATCTTGTCCTCACTCAGTATGTTATGACTTGACATCAGAATGGTTTTTCATCAAAACAAAAGGACGAAAAAGATAAAAGATAAAAGAAAAAAGATAAAAAGATAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATTCCAACTTAAAACAAAAACATAAACTAACCTTCAAAGTTTAGGTAACATGATTCTTCCCCAAGAGGTATATCAGAGCCAAGGCCCATCTCAAAGCTAGATGGTTTGATTCCTCAACCCTTACAATTGTTGAACTAAAAAATATCAGTATCTATCGGATATCAACGTGTTACAATTAGGAATGCATCTAAACTTGTCCTAGTTATGATTTCACATTGTCAGTCCTAAGTGCATTTATTTGTTTAGAGGGTTTGTAACATCATCAAAGCTAATTACTAATTGTTTTCTCATGAATTCATCTGTATAGAGTTGGATTTTTTGAATGATTTGTTTTTCTTTTTCTTTCTTTTTTTTTTCTGCTGACACGCAAATTTCTTGTCCGCTTAGTACTCTACTTGGGATTCACCCTCTCATGCTAAAGCAGAACATATGGATGGTTATGGAGCGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGACTCATGCGAGGAAATTTACCATATTTCTTGCATCAAACCTCCCGTCAAAGAGATTCCCCTTAAGAGTTGGTACTGTGCTAGTTGCATTGCAAGTGGATTTAGTTTGCGTCATGACAACTGTGCAGTATGTGAGAGGTTGAATACGCCTACGACGCTAGTCAATGGAGTTGAGGAAATTCTGGAATCAAGTGAACACAATCATTTTCATGGGGATAAGAATCCGAACTATTGTATGGGTGACGGTACTGAACAACTCAAGGACGGCAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGGAGTAGAAGGTGGTGATAAATATAGAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAGAAGCAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCCCCTCTTGCTGCAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCGGGCAATACGCACAGTGAAAATGGCATATGAAAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATTTGGGGGTTACGGAAATTCAGGCAAGAAACGGATCAATGGAGGTGATGAGGAATTGGATACAGGAAGGGGAGGAATGGATATGCTTCTTACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTCATATAAATAA

mRNA sequence

ATGGTCAATTTAGATGCGTCTCCTGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATGCCAGTCGTCAGGTGTCAATGGAGGCAATGTACCAACGTGTGTCCAGGATGGCCTTGCTTCTCATTCAGGAACCAATGACCGCTCAAGATTTAGGGTTAGCTCCGAATATGTTTTTCAAGTTGATCTTGTGATGAGATCTTTTTCTTTTCTTTTGGTTCAGTTTTTAGATCACCCTTGTTCACCCCCTGTAATTGTTGTGCAGAAATTTGATGTTCAAGATGCAAACAGCAATAATGACCTTGCACGTACTGGATTAGTGTCTAGTGCAGTTCAGATGGCATCTCATAGAGAAAATGGTGATGTATCAAATGGATCATTAGAAAATTCAAACAGATGTAGTGTCAACGAGAGTTGCAAGCGAGCTTTCTATAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATGTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAATTCACCCATGCTCTTCCTCTCTGACATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAATGCCTCTCAGACTTTTCTAGAACTACCTATCGAGAAAAGGTGGGAGTTTCAGGGTGCAATGTATTTGAAGATGGAAAGCACGAGTACTCTACTTGGGATTCACCCTCTCATGCTAAAGCAGAACATATGGATGGTTATGGAGCGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGACTCATGCGAGGAAATTTACCATATTTCTTGCATCAAACCTCCCGTCAAAGAGATTCCCCTTAAGAGTTGGTACTGTGCTAGTTGCATTGCAAGTGGATTTAGTTTGCGTCATGACAACTGTGCAGTATGTGAGAGGTTGAATACGCCTACGACGCTAGTCAATGGAGTTGAGGAAATTCTGGAATCAAGTGAACACAATCATTTTCATGGGGATAAGAATCCGAACTATTGTATGGGTGACGGTACTGAACAACTCAAGGACGGCAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGGAGTAGAAGGTGGTGATAAATATAGAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAGAAGCAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCCCCTCTTGCTGCAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCGGGCAATACGCACAGTGAAAATGGCATATGAAAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATTTGGGGGTTACGGAAATTCAGGCAAGAAACGGATCAATGGAGGTGATGAGGAATTGGATACAGGAAGGGGAGGAATGGATATGCTTCTTACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTCATATAAATAA

Coding sequence (CDS)

ATGGTCAATTTAGATGCGTCTCCTGAGGACCTCTGGAGATCTGTTTTGTTACAGCAGATATGCCAGTCGTCAGGTGTCAATGGAGGCAATGTACCAACGTGTGTCCAGGATGGCCTTGCTTCTCATTCAGGAACCAATGACCGCTCAAGATTTAGGGTTAGCTCCGAATATGTTTTTCAAGTTGATCTTGTGATGAGATCTTTTTCTTTTCTTTTGGTTCAGTTTTTAGATCACCCTTGTTCACCCCCTGTAATTGTTGTGCAGAAATTTGATGTTCAAGATGCAAACAGCAATAATGACCTTGCACGTACTGGATTAGTGTCTAGTGCAGTTCAGATGGCATCTCATAGAGAAAATGGTGATGTATCAAATGGATCATTAGAAAATTCAAACAGATGTAGTGTCAACGAGAGTTGCAAGCGAGCTTTCTATAGTATTATAGATTCACAGAAGTTTATCTCATTGTGTAAGCTTCTATGTGAAAATTTCAGAGGAATCAAGGCTGATAATGTTTTTGACTTTAGTCTTGTAAACTCAAGGATCAAAGAAGGGGCTTATGAAAATTCACCCATGCTCTTCCTCTCTGACATATGGAGAAAGTTTCAAGCAATTGGTACTGAATTGGTATCACTGGCAGAATGCCTCTCAGACTTTTCTAGAACTACCTATCGAGAAAAGGTGGGAGTTTCAGGGTGCAATGTATTTGAAGATGGAAAGCACGAGTACTCTACTTGGGATTCACCCTCTCATGCTAAAGCAGAACATATGGATGGTTATGGAGCGTATAAAGTTTGTGCCTGCAGAAGTTGTGGAGAGAAAGCAGAAGGGATTGATTGTCTGGTTTGTGACTCATGCGAGGAAATTTACCATATTTCTTGCATCAAACCTCCCGTCAAAGAGATTCCCCTTAAGAGTTGGTACTGTGCTAGTTGCATTGCAAGTGGATTTAGTTTGCGTCATGACAACTGTGCAGTATGTGAGAGGTTGAATACGCCTACGACGCTAGTCAATGGAGTTGAGGAAATTCTGGAATCAAGTGAACACAATCATTTTCATGGGGATAAGAATCCGAACTATTGTATGGGTGACGGTACTGAACAACTCAAGGACGGCAAAGATTTGGGCCCTTGCAAAATTTGTGGAAATGGAGTAGAAGGTGGTGATAAATATAGAATATGCAGCCACCTGTTCTGCCCTCATAAATGCTATCACACCAGGTGCTTGACTAAGAAGCAGTTAAAATCTTACGATACATGCTGGTACTGCCCTTCTTGTCTTTGCAGAGCATGCCTCATAAATCAAGACGATGACAAGATTGTTTTATGTGATGGCTGTGATCACGGATTCCACATTTATTGTATGAGACCCCCTCTTGCTGCAATTCCAAAAGGAAAATGGTTTTGTAGCAAATGTGCAGCTGGAATCCGGGCAATACGCACAGTGAAAATGGCATATGAAAATTTTGAAAACAAGCAAAGTAAGAGAGGTAAAGATACATTTGGGGGTTACGGAAATTCAGGCAAGAAACGGATCAATGGAGGTGATGAGGAATTGGATACAGGAAGGGGAGGAATGGATATGCTTCTTACTGCAGCCAAGACTCTAAATTATGAAGAGGGTCTGGCTAACCTTTCATATAAATAA

Protein sequence

MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQVDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGDVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIKEGAYENSPMLFLSDIWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFEDGKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEEGLANLSYK

Homology

[Close]

BLAST of HG10005913 vs. NCBI nr
Match: XP_016900482.1 (PREDICTED: remodeling and spacing factor 1 [Cucumis melo])

HSP 1 Score: 950.3 bits (2455), Expect = 7.4e-273
Identity = 465/547 (85.01%), Postives = 475/547 (86.84%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDGLASHSGTNDRSRFR        
Sbjct: 69  MVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDGLASHSGTNDRSRFR-------- 128

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNNDLA TG VSS VQMASHRENG
Sbjct: 129 ----------------------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENG 188

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
           DVSNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 189 DVSNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 248

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENS  LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 249 IKEGAYENSSALFLSDIQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 308

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE S WDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP
Sbjct: 309 GKHEDSIWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 368

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCA+CIASGFSLRHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP
Sbjct: 369 VKEIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANP 428

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
            YCM DGTEQLKDGKDLGPCKICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD
Sbjct: 429 KYCMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYD 488

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
            CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+A
Sbjct: 489 ACWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQA 548

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR+VKMAYENFENKQSKRGKDTF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNY
Sbjct: 549 IRSVKMAYENFENKQSKRGKDTF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNY 576

Query: 541 EEGLANL 545
           EEGLANL
Sbjct: 609 EEGLANL 576

[Close]

BLAST of HG10005913 vs. NCBI nr
Match: TYK23258.1 (remodeling and spacing factor 1 [Cucumis melo var. makuwa])

HSP 1 Score: 950.3 bits (2455), Expect = 7.4e-273
Identity = 465/547 (85.01%), Postives = 475/547 (86.84%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDGLASHSGTNDRSRFR        
Sbjct: 67  MVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDGLASHSGTNDRSRFR-------- 126

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNNDLA TG VSS VQMASHRENG
Sbjct: 127 ----------------------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENG 186

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
           DVSNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 187 DVSNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 246

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENS  LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 247 IKEGAYENSSALFLSDIQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 306

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE S WDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP
Sbjct: 307 GKHEDSIWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 366

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCA+CIASGFSLRHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP
Sbjct: 367 VKEIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANP 426

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
            YCM DGTEQLKDGKDLGPCKICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD
Sbjct: 427 KYCMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYD 486

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
            CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+A
Sbjct: 487 ACWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQA 546

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR+VKMAYENFENKQSKRGKDTF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNY
Sbjct: 547 IRSVKMAYENFENKQSKRGKDTF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNY 574

Query: 541 EEGLANL 545
           EEGLANL
Sbjct: 607 EEGLANL 574

[Close]

BLAST of HG10005913 vs. NCBI nr
Match: XP_038897858.1 (PHD finger protein EHD3 [Benincasa hispida])

HSP 1 Score: 941.8 bits (2433), Expect = 2.6e-270
Identity = 463/548 (84.49%), Postives = 478/548 (87.23%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SPEDLWRSV LQQICQSSGV GGNVP CVQDGLASHSGTNDRSRFR        
Sbjct: 104 MVNLDESPEDLWRSVWLQQICQSSGVTGGNVPMCVQDGLASHSGTNDRSRFR-------- 163

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD Q ANSNNDLARTG VSS V++ASHRENG
Sbjct: 164 ----------------------------KFDAQGANSNNDLARTGSVSSTVRLASHRENG 223

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
           D SNGSLENSN+CSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 224 DASNGSLENSNKCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 283

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENS  LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTY+EKVGVSG NVF+D
Sbjct: 284 IKEGAYENSSTLFLSDIQQIWRKFQAIGTELVSLAESLSDFSRTTYQEKVGVSGRNVFQD 343

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE STWDS SHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP
Sbjct: 344 GKHEDSTWDSHSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 403

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCA+CIASGFSLRHDNC VCERLN PTTL NGV+ ILE+SEHN  HGD+NP
Sbjct: 404 VKEIPLKSWYCANCIASGFSLRHDNCVVCERLNIPTTLANGVDVILETSEHN--HGDENP 463

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNG-VEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSY 420
           NYCM DGTEQLK+GKDLGPCKICGNG VEG DKYRICSHLFCPHK YH RCLT KQLKSY
Sbjct: 464 NYCMEDGTEQLKEGKDLGPCKICGNGVVEGDDKYRICSHLFCPHKYYHIRCLTMKQLKSY 523

Query: 421 DTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIR 480
           DTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+
Sbjct: 524 DTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQ 583

Query: 481 AIRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLN 540
           AIR+VKMAYENFENKQSKRGKDTFG YGNSGK+RINGGDEE DTGRGGMDMLLTAAKTLN
Sbjct: 584 AIRSVKMAYENFENKQSKRGKDTFGVYGNSGKERINGGDEESDTGRGGMDMLLTAAKTLN 613

Query: 541 YEEGLANL 545
           YEEGLANL
Sbjct: 644 YEEGLANL 613

[Close]

BLAST of HG10005913 vs. NCBI nr
Match: XP_004139798.1 (PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_011658995.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_031744612.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_031744613.1 PHD finger protein EHD3 isoform X1 [Cucumis sativus] >KAE8646065.1 hypothetical protein Csa_016584 [Cucumis sativus])

HSP 1 Score: 933.7 bits (2412), Expect = 7.2e-268
Identity = 458/547 (83.73%), Postives = 472/547 (86.29%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SPEDLWRSV LQQICQSSGV GGNV  CVQDGLASHSGTNDRSRF+        
Sbjct: 67  MVNLDESPEDLWRSVWLQQICQSSGVIGGNVLMCVQDGLASHSGTNDRSRFK-------- 126

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNND A T  VSS VQMASHRENG
Sbjct: 127 ----------------------------KFDAQDANSNNDHAHTVSVSSIVQMASHRENG 186

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
           D+SNGSLENSNRC+VNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 187 DISNGSLENSNRCTVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 246

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENS  LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 247 IKEGAYENSSTLFLSDIQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 306

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE S WDSPSHAKAEH DGYGAYK+CACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP
Sbjct: 307 GKHEDSIWDSPSHAKAEHTDGYGAYKICACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 366

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCA+CIASGFSLRHDNC VC+RLNTPTTL NGV+ ILE+SEHNHF GD+NP
Sbjct: 367 VKEIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVDGILETSEHNHFDGDENP 426

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
            YCM DGTEQLKDGKDLGPCKICGN VEG +KY ICSHLFCPHKCYHTRCLTKKQLKSYD
Sbjct: 427 KYCMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIICSHLFCPHKCYHTRCLTKKQLKSYD 486

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
            CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+A
Sbjct: 487 ACWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQA 546

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR+VKMAYENFENKQSKRGKDT    GNSGKKRINGGDEE D GRGGMDMLLTAAKTLNY
Sbjct: 547 IRSVKMAYENFENKQSKRGKDT---CGNSGKKRINGGDEESDIGRGGMDMLLTAAKTLNY 574

Query: 541 EEGLANL 545
           EEGLANL
Sbjct: 607 EEGLANL 574

[Close]

BLAST of HG10005913 vs. NCBI nr
Match: XP_022975583.1 (PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975586.1 PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975591.1 PHD finger protein EHD3-like [Cucurbita maxima])

HSP 1 Score: 917.9 bits (2371), Expect = 4.1e-263
Identity = 448/547 (81.90%), Postives = 466/547 (85.19%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SP+DLWRSVL++Q+C  S VNG NVP CV DGLA++SG ND SRFR        
Sbjct: 104 MVNLDESPDDLWRSVLVKQMCHLSSVNGDNVPMCVHDGLATNSGANDPSRFR-------- 163

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNNDLARTG VSS VQMASHRENG
Sbjct: 164 ----------------------------KFDAQDANSNNDLARTGSVSSTVQMASHRENG 223

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
            VSNGSLEN +RCSVNESC RAF SIIDSQKFISLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 224 VVSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSR 283

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENSP LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 284 IKEGAYENSPTLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 343

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE STW+SPSHAKAEHMDGYGAYKVCACRSCGEKAEGI+CLVCDSCEEIYHISCIKPP
Sbjct: 344 GKHESSTWESPSHAKAEHMDGYGAYKVCACRSCGEKAEGINCLVCDSCEEIYHISCIKPP 403

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCASC  SGFSLRHDNC VCERLNTPT L NGV EILE+SEHNHFHGD NP
Sbjct: 404 VKEIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNP 463

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
           NYC  DG EQLKD +DLGPCKICGNGVEGGDKYR+CSHLFCPH+ YHTRCLTK QLKSYD
Sbjct: 464 NYCTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYD 523

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
           TCWYCPSCLCRACL+NQDDDKIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGI+A
Sbjct: 524 TCWYCPSCLCRACLVNQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQA 583

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR VKMAYENFENK+SKRGKDTF   G SGKKRINGGDEE DTGRGGMDMLLTAAKTLNY
Sbjct: 584 IRRVKMAYENFENKRSKRGKDTF---GKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNY 611

Query: 541 EEGLANL 545
           EEGL NL
Sbjct: 644 EEGLTNL 611

[Close]

BLAST of HG10005913 vs. ExPASy Swiss-Prot
Match: Q6ZJM9 (PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.0e-55
Identity = 140/445 (31.46%), Postives = 213/445 (47.87%), Query Frame = 0


Query: 78  HPC--SPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENGDV--SNGSLENSNRC 137
           +PC  +  V+V  +F    A+S  + A+       VQ  +    G V  ++ +++++   
Sbjct: 87  NPCLLTNGVVVHTEFKGNPAHSQGEEAK-------VQHPNGAAGGKVVSADAAIQDAAAA 146

Query: 138 SVNES----CKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIKEGAYENS 197
           + +E+    C  A + I+ SQKF  LC LL   F   K  +V D   ++++++ G Y ++
Sbjct: 147 ASSEANKAMCNNALFDILVSQKFALLCHLLLGTFHVNKPGDVIDLEKIDAKMRNGDYAHN 206

Query: 198 PMLFLSDI---WRKFQAIGTELVSLAECLSDFSRTTYREKV-GVSGCNVFEDGKHEYS-- 257
           P LF  DI   W KF+ +G E+  LA  LS  SR +Y+++  G S   V E    E S  
Sbjct: 207 PALFDDDIQQMWEKFEQVGQEMTGLASNLSTISRVSYQKQASGFSEAEVAEHRIEEISLP 266

Query: 258 ------TWDS----------PSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEE 317
                 T +S           SH+            +C C  CG K +  + L+CD C+ 
Sbjct: 267 GAVHVVTKESTTTVQLAPCDSSHSTIPKRTVPPGRDLCPCDGCGTKVDVEEGLICDECDT 326

Query: 318 IYHISCIK---PPVKEIPLKSWYCASCIASGFSLRHD-------------NCAVCERLNT 377
           +YH +C+K   P +K++P   W+C++C      L  D             NC +C++L  
Sbjct: 327 MYHFACVKLLNPDIKQVP-AIWHCSTCSFKKKELAADTTNNVAHDCLHGGNCVLCDQLEL 386

Query: 378 PTTLVNGVEEILESSEHNHFHGDKNPNYCMGDGTE-QLKDGKDLGPCKICGNGVEGGDKY 437
             T     +  ++        G    +  MG+  E  L        CK CG   +   ++
Sbjct: 387 VKTEEEDPKLPIKIELAEEREGSSVSS--MGEDNEPDLSTTALSNLCKHCGTCEDDDKRF 446

Query: 438 RICSHLFCPHKCYHTRCLTKKQLKSYDT----CWYCPSCLCRACLINQDDDKIVLCDGCD 472
            +C H +C +K YH RCL   QL         CWYCPSCLCR C  ++DDD+IV+CDGCD
Sbjct: 447 MVCGHPYCVYKFYHIRCLKTSQLAIEQQKKLGCWYCPSCLCRGCFQDKDDDQIVMCDGCD 506

[Close]

BLAST of HG10005913 vs. ExPASy Swiss-Prot
Match: Q38JA7 (Lysine-specific demethylase 5C OS=Canis lupus familiaris OX=9615 GN=KDM5C PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 408 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 467
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 468 CSKC 472
           C KC
Sbjct: 368 CPKC 371

[Close]

BLAST of HG10005913 vs. ExPASy Swiss-Prot
Match: P41229 (Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 408 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 467
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 468 CSKC 472
           C KC
Sbjct: 368 CPKC 371

[Close]

BLAST of HG10005913 vs. ExPASy Swiss-Prot
Match: P41230 (Lysine-specific demethylase 5C OS=Mus musculus OX=10090 GN=Kdm5c PE=1 SV=4)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 408 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 467
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 308 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 367

Query: 468 CSKC 472
           C KC
Sbjct: 368 CPKC 371

[Close]

BLAST of HG10005913 vs. ExPASy Swiss-Prot
Match: A1YVX4 (Lysine-specific demethylase 5C OS=Sus scrofa OX=9823 GN=KDM5C PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.8e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 408 LTKKQLKSYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWF 467
           +T +  +++    +  S +CR C    +DDK++LCDGCD  +HI+C+ PPL  IPKG W 
Sbjct: 267 MTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWR 326

Query: 468 CSKC 472
           C KC
Sbjct: 327 CPKC 330

[Close]

BLAST of HG10005913 vs. ExPASy TrEMBL
Match: A0A5D3DIH3 (Remodeling and spacing factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003110 PE=4 SV=1)

HSP 1 Score: 950.3 bits (2455), Expect = 3.6e-273
Identity = 465/547 (85.01%), Postives = 475/547 (86.84%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDGLASHSGTNDRSRFR        
Sbjct: 67  MVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDGLASHSGTNDRSRFR-------- 126

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNNDLA TG VSS VQMASHRENG
Sbjct: 127 ----------------------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENG 186

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
           DVSNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 187 DVSNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 246

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENS  LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 247 IKEGAYENSSALFLSDIQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 306

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE S WDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP
Sbjct: 307 GKHEDSIWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 366

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCA+CIASGFSLRHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP
Sbjct: 367 VKEIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANP 426

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
            YCM DGTEQLKDGKDLGPCKICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD
Sbjct: 427 KYCMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYD 486

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
            CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+A
Sbjct: 487 ACWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQA 546

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR+VKMAYENFENKQSKRGKDTF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNY
Sbjct: 547 IRSVKMAYENFENKQSKRGKDTF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNY 574

Query: 541 EEGLANL 545
           EEGLANL
Sbjct: 607 EEGLANL 574

[Close]

BLAST of HG10005913 vs. ExPASy TrEMBL
Match: A0A1S4DWX3 (remodeling and spacing factor 1 OS=Cucumis melo OX=3656 GN=LOC103490198 PE=4 SV=1)

HSP 1 Score: 950.3 bits (2455), Expect = 3.6e-273
Identity = 465/547 (85.01%), Postives = 475/547 (86.84%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SPEDLWRSV LQQICQSSGV GGNVPTCVQDGLASHSGTNDRSRFR        
Sbjct: 69  MVNLDESPEDLWRSVWLQQICQSSGVIGGNVPTCVQDGLASHSGTNDRSRFR-------- 128

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNNDLA TG VSS VQMASHRENG
Sbjct: 129 ----------------------------KFDAQDANSNNDLAHTGSVSSTVQMASHRENG 188

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
           DVSNGSLENSNRCSVNESC+RAF SIIDSQKF+SLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 189 DVSNGSLENSNRCSVNESCRRAFRSIIDSQKFVSLCKLLSENFRGIKADNVFDFSLVNSR 248

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENS  LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 249 IKEGAYENSSALFLSDIQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 308

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE S WDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP
Sbjct: 309 GKHEDSIWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 368

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCA+CIASGFSLRHDNC VC+RLNTPTTL NGV  ILE+SEHNHFHGD NP
Sbjct: 369 VKEIPLKSWYCATCIASGFSLRHDNCVVCDRLNTPTTLANGVNGILETSEHNHFHGDANP 428

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
            YCM DGTEQLKDGKDLGPCKICGN VEG +KY +CSHLFCPHKCYHTRCLTKKQLKSYD
Sbjct: 429 KYCMDDGTEQLKDGKDLGPCKICGNEVEGDEKYIVCSHLFCPHKCYHTRCLTKKQLKSYD 488

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
            CWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGI+A
Sbjct: 489 ACWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIQA 548

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR+VKMAYENFENKQSKRGKDTF   GN GKKR NGG+EE DTG GGMDMLLTAAKTLNY
Sbjct: 549 IRSVKMAYENFENKQSKRGKDTF---GNLGKKRTNGGEEESDTGGGGMDMLLTAAKTLNY 576

Query: 541 EEGLANL 545
           EEGLANL
Sbjct: 609 EEGLANL 576

[Close]

BLAST of HG10005913 vs. ExPASy TrEMBL
Match: A0A6J1IEM0 (PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV=1)

HSP 1 Score: 917.9 bits (2371), Expect = 2.0e-263
Identity = 448/547 (81.90%), Postives = 466/547 (85.19%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SP+DLWRSVL++Q+C  S VNG NVP CV DGLA++SG ND SRFR        
Sbjct: 104 MVNLDESPDDLWRSVLVKQMCHLSSVNGDNVPMCVHDGLATNSGANDPSRFR-------- 163

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNNDLARTG VSS VQMASHRENG
Sbjct: 164 ----------------------------KFDAQDANSNNDLARTGSVSSTVQMASHRENG 223

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
            VSNGSLEN +RCSVNESC RAF SIIDSQKFISLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 224 VVSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSR 283

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENSP LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 284 IKEGAYENSPTLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 343

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE STW+SPSHAKAEHMDGYGAYKVCACRSCGEKAEGI+CLVCDSCEEIYHISCIKPP
Sbjct: 344 GKHESSTWESPSHAKAEHMDGYGAYKVCACRSCGEKAEGINCLVCDSCEEIYHISCIKPP 403

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCASC  SGFSLRHDNC VCERLNTPT L NGV EILE+SEHNHFHGD NP
Sbjct: 404 VKEIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNP 463

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
           NYC  DG EQLKD +DLGPCKICGNGVEGGDKYR+CSHLFCPH+ YHTRCLTK QLKSYD
Sbjct: 464 NYCTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYD 523

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
           TCWYCPSCLCRACL+NQDDDKIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGI+A
Sbjct: 524 TCWYCPSCLCRACLVNQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQA 583

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR VKMAYENFENK+SKRGKDTF   G SGKKRINGGDEE DTGRGGMDMLLTAAKTLNY
Sbjct: 584 IRRVKMAYENFENKRSKRGKDTF---GKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNY 611

Query: 541 EEGLANL 545
           EEGL NL
Sbjct: 644 EEGLTNL 611

[Close]

BLAST of HG10005913 vs. ExPASy TrEMBL
Match: A0A6J1F863 (PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 SV=1)

HSP 1 Score: 913.7 bits (2360), Expect = 3.7e-262
Identity = 447/547 (81.72%), Postives = 463/547 (84.64%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGVNGGNVPTCVQDGLASHSGTNDRSRFRVSSEYVFQ 60
           MVNLD SP+DLWRSV  +Q+C  S VNG NVP CV DGLA++SG ND  RFR        
Sbjct: 104 MVNLDESPDDLWRSVFSKQMCHLSSVNGDNVPMCVNDGLATNSGANDPPRFR-------- 163

Query: 61  VDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHRENG 120
                                       KFD QDANSNNDLARTG VSS VQMASHRENG
Sbjct: 164 ----------------------------KFDAQDANSNNDLARTGSVSSTVQMASHRENG 223

Query: 121 DVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSR 180
            VSNGSLEN +RCSVNESC RAF SIIDSQKFISLCKLL ENFRGIKADNVFDFSLVNSR
Sbjct: 224 VVSNGSLENPDRCSVNESCWRAFLSIIDSQKFISLCKLLSENFRGIKADNVFDFSLVNSR 283

Query: 181 IKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFED 240
           IKEGAYENSP LFLSD   IWRKFQAIGTELVSLAE LSDFSRTTYREKVGVSG NVFED
Sbjct: 284 IKEGAYENSPTLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRTTYREKVGVSGRNVFED 343

Query: 241 GKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPP 300
           GKHE STW+SPSHAKAEHMDGYGAYKVCACRSCGEKAEGI+CLVCDSCEEIYHISCIKPP
Sbjct: 344 GKHESSTWESPSHAKAEHMDGYGAYKVCACRSCGEKAEGINCLVCDSCEEIYHISCIKPP 403

Query: 301 VKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGDKNP 360
           VKEIPLKSWYCASC  SGFSLRHDNC VCERLNTPT L NGV EILE+SEHNHFHGD NP
Sbjct: 404 VKEIPLKSWYCASCTGSGFSLRHDNCVVCERLNTPTMLANGVGEILETSEHNHFHGDDNP 463

Query: 361 NYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYD 420
           NYC  DG EQLKD +DLGPCKICGNGVEGGDKYR+CSHLFCPH+ YHTRCLTK QLKSYD
Sbjct: 464 NYCTDDGFEQLKDSQDLGPCKICGNGVEGGDKYRMCSHLFCPHQFYHTRCLTKNQLKSYD 523

Query: 421 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRA 480
           TCWYCPSCLCRACLINQDDDKIVLCDGCDHG+HIYCMRPPLAAIPKG+WFCSKC AGI+A
Sbjct: 524 TCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAAIPKGQWFCSKCEAGIQA 583

Query: 481 IRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNY 540
           IR VKMAYENFENK+SKRGKDTF   G SGKKRINGGDEE DTGRGGMDMLLTAAKTLNY
Sbjct: 584 IRRVKMAYENFENKRSKRGKDTF---GKSGKKRINGGDEESDTGRGGMDMLLTAAKTLNY 611

Query: 541 EEGLANL 545
           EEGL NL
Sbjct: 644 EEGLTNL 611

[Close]

BLAST of HG10005913 vs. ExPASy TrEMBL
Match: A0A6J1EE29 (PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111433442 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 4.5e-252
Identity = 437/550 (79.45%), Postives = 457/550 (83.09%), Query Frame = 0


Query: 1   MVNLDASPEDLWRSVLLQQICQSSGV---NGGNVPTCVQDGLASHSGTNDRSRFRVSSEY 60
           MVNLD  PEDLWRSVLLQQI QSS V   NGGN+P CV DGLASHSG  D SRF++    
Sbjct: 106 MVNLDECPEDLWRSVLLQQIYQSSSVNGGNGGNIPMCVHDGLASHSGAIDPSRFKI---- 165

Query: 61  VFQVDLVMRSFSFLLVQFLDHPCSPPVIVVQKFDVQDANSNNDLARTGLVSSAVQMASHR 120
                                           FD Q  NSN DL RTG VSS VQMASH+
Sbjct: 166 --------------------------------FDAQHGNSNIDLLRTGSVSSRVQMASHK 225

Query: 121 ENGDVSNGSLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLV 180
           ENG VS+GSLENSNRCSV+ESC RAF+SIIDSQKFISLCKLL ENFRGIKADNVFDFSLV
Sbjct: 226 ENGVVSSGSLENSNRCSVSESCWRAFFSIIDSQKFISLCKLLSENFRGIKADNVFDFSLV 285

Query: 181 NSRIKEGAYENSPMLFLSD---IWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNV 240
           NSRIKEGAYENSPMLFLSD   IWRKFQAIGTELVSLAE LSDFSR  Y+EKVGVSG NV
Sbjct: 286 NSRIKEGAYENSPMLFLSDVQQIWRKFQAIGTELVSLAESLSDFSRAAYQEKVGVSGRNV 345

Query: 241 FEDGKHEYSTWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCI 300
           FEDGKHE+ST +SPSHAKAEHMDGYG YKVCACRSCGEKAEGIDCLVCDSCEEIYHISCI
Sbjct: 346 FEDGKHEFSTRESPSHAKAEHMDGYGVYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCI 405

Query: 301 KPPVKEIPLKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSEHNHFHGD 360
           KPPVKEIPLKSW+CASCI+SGFSL HDNC VCERLNTPT L NGV EILE+SE N     
Sbjct: 406 KPPVKEIPLKSWFCASCISSGFSLCHDNCVVCERLNTPTMLANGVGEILETSEVN----- 465

Query: 361 KNPNYCMGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLK 420
           +N N C+ DG EQL D KDLGPCKICGNGVE GD +RICSHLFCPHKCYHTRCLTKKQLK
Sbjct: 466 ENLNCCLDDGIEQLNDSKDLGPCKICGNGVESGDNFRICSHLFCPHKCYHTRCLTKKQLK 525

Query: 421 SYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAG 480
           SYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHG+HIYCMRPPLA IPKGKWFCSKC AG
Sbjct: 526 SYDTCWYCPSCLCRACLINQDDDKIVLCDGCDHGYHIYCMRPPLAEIPKGKWFCSKCEAG 585

Query: 481 IRAIRTVKMAYENFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKT 540
           I AIR VK AYENFE+K+SKRGKDTFGGYGNSGKKRINGGD+E DTGR GMDMLLTAAKT
Sbjct: 586 IEAIRRVKRAYENFEHKRSKRGKDTFGGYGNSGKKRINGGDQESDTGRRGMDMLLTAAKT 614

Query: 541 LNYEEGLANL 545
           LNYEEGLANL
Sbjct: 646 LNYEEGLANL 614

[Close]

BLAST of HG10005913 vs. TAIR 10
Match: AT1G77250.1 (RING/FYVE/PHD-type zinc finger family protein )

HSP 1 Score: 331.6 bits (849), Expect = 1.2e-90
Identity = 170/428 (39.72%), Postives = 244/428 (57.01%), Query Frame = 0


Query: 126 SLENSNRCSVNESCKRAFYSIIDSQKFISLCKLLCENFRGIKADNVFDFSLVNSRIKEGA 185
           S E++N  +V   C+     ++ S++F SL +LL EN +G+K D+    +L+++R+KEG 
Sbjct: 113 SSESTNHETVTAGCQHVLSHVLASKEFASLNRLLSENLQGVKIDDFTSRTLIDTRMKEGV 172

Query: 186 YENSPMLF---LSDIWRKFQAIGTELVSLAECLSDFSRTTYREKVGVSGCNVFEDGKHEY 245
           YE SP+LF   L ++W+K Q +G ++  LA  L + SRT+Y+E++             ++
Sbjct: 173 YEGSPLLFSTDLQEVWQKMQDVGNDMAVLANSLLELSRTSYKEQL------------KQF 232

Query: 246 STWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGIDCLVCDSCEEIYHISCIKPPVKEIP 305
            T +S     AE++       +  C+ CGEKAE  DCL CD CE++YH+SC +P  K +P
Sbjct: 233 YTGESKPCPNAENIRNDSVSDI--CKLCGEKAEARDCLACDHCEDMYHVSCAQPGGKGMP 292

Query: 306 LKSWYCASCIASGFSLRHDNCAVCERLNTPTTLVNGVEEILESSE--HNHFHGDKNPNYC 365
             SWYC  C + G    H+NC VCE++ T   +      +  S+E   +    ++N +  
Sbjct: 293 THSWYCLDCTSKGIGSPHENCVVCEKMKTQGMMKTDNRSVDTSTECKEDSNESEENSSCN 352

Query: 366 MGDGTEQLKDGKDLGPCKICGNGVEGGDKYRICSHLFCPHKCYHTRCLTKKQLKSYDTCW 425
           M      ++  +D   C+ CG  V+ G KY  C H FCPHK YH RCLT +Q+K +   W
Sbjct: 353 MNHEVHHVEMSRDSELCRTCGTKVDSGGKYITCDHPFCPHKYYHIRCLTSRQIKLHGVRW 412

Query: 426 YCPSCLCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRT 485
           YC SCLCR CL ++DDDKIVLCDGCD  +HIYCMRPP  ++P G+WFC+ C A I  ++ 
Sbjct: 413 YCSSCLCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGEWFCTACKAAILKVQK 472

Query: 486 VKMAYE-NFENKQSKRGKDTFGGYGNSGKKRINGGDEELDTGRGGMDMLLTAAKTLNYEE 545
            + A+E   E  Q ++G       G    K  NG   ELD   GGMDMLL AA TL  EE
Sbjct: 473 ARKAFEKKMETVQKQKGIKPKNLQGKPQSKD-NG---ELDQSVGGMDMLLNAADTLKDEE 522

Query: 546 GLANLSYK 548
            +   S K
Sbjct: 533 QMTFQSIK 522

[Close]

BLAST of HG10005913 vs. TAIR 10
Match: AT3G01460.1 (methyl-CPG-binding domain 9 )

HSP 1 Score: 71.2 bits (173), Expect = 2.8e-12
Identity = 27/72 (37.50%), Postives = 46/72 (63.89%), Query Frame = 0


Query: 426  LCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCAAGIRAIRTVKMAY 485
            +C+ C +++DDD ++LCD CD  +H YC+ PPL  IP G W+C  C   + A R  + A 
Sbjct: 1289 VCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSC---VIAKRMAQEAL 1348

Query: 486  ENFENKQSKRGK 498
            E+++  + ++G+
Sbjct: 1349 ESYKLVRRRKGR 1357

HSP 2 Score: 48.1 bits (113), Expect = 2.6e-05
Identity = 28/93 (30.11%), Postives = 43/93 (46.24%), Query Frame = 0


Query: 231 GCNVFEDGKHEY-------STWDSPSHAKAEHMDGYGAYKVCACRSCGEKAEGID-CLVC 290
           GC   +D   EY       S  D+P  A     +     +  +C +CG + E I+  +VC
Sbjct: 43  GCTAGQDDDGEYEPVEVVRSIHDNPDPAPGAPAEVPEPDRDASCGACG-RPESIELVVVC 102

Query: 291 DSCEEIYHISCIKPPVKEIPLKSWYCASCIASG 316
           D+CE  +H+SC+   V+  P   W C+ C   G
Sbjct: 103 DACERGFHMSCVNDGVEAAPSADWMCSDCRTGG 134

[Close]

BLAST of HG10005913 vs. TAIR 10
Match: AT5G24330.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 )

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-10
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 0


Query: 426 LCRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCA 473
           +C  C   +   K++LCD CD GFH++C+RP L ++PKG WFC  C+
Sbjct: 34  VCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSCS 80

[Close]

BLAST of HG10005913 vs. TAIR 10
Match: AT5G09790.1 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-08
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 427 CRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCA 473
           C  C   + DD+++LCD CD GFH+ C+RP +  +P G W C  C+
Sbjct: 67  CEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCS 112

[Close]

BLAST of HG10005913 vs. TAIR 10
Match: AT5G09790.2 (ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 )

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-08
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 427 CRACLINQDDDKIVLCDGCDHGFHIYCMRPPLAAIPKGKWFCSKCA 473
           C  C   + DD+++LCD CD GFH+ C+RP +  +P G W C  C+
Sbjct: 67  CEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDCS 112

The following BLAST results are available for this feature:

BLAST of HG10005913 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900482.1	7.4e-273	85.01	PREDICTED: remodeling and spacing factor 1 [Cucumis melo]	[more]
TYK23258.1	7.4e-273	85.01	remodeling and spacing factor 1 [Cucumis melo var. makuwa]	[more]
XP_038897858.1	2.6e-270	84.49	PHD finger protein EHD3 [Benincasa hispida]	[more]
XP_004139798.1	7.2e-268	83.73	PHD finger protein EHD3 isoform X1 [Cucumis sativus] >XP_011658995.1 PHD finger ...	[more]
XP_022975583.1	4.1e-263	81.90	PHD finger protein EHD3-like [Cucurbita maxima] >XP_022975586.1 PHD finger prote...	[more]

BLAST of HG10005913 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZJM9	2.0e-55	31.46	PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV...	[more]
Q38JA7	2.8e-12	43.75	Lysine-specific demethylase 5C OS=Canis lupus familiaris OX=9615 GN=KDM5C PE=2 S...	[more]
P41229	2.8e-12	43.75	Lysine-specific demethylase 5C OS=Homo sapiens OX=9606 GN=KDM5C PE=1 SV=2	[more]
P41230	2.8e-12	43.75	Lysine-specific demethylase 5C OS=Mus musculus OX=10090 GN=Kdm5c PE=1 SV=4	[more]
A1YVX4	2.8e-12	43.75	Lysine-specific demethylase 5C OS=Sus scrofa OX=9823 GN=KDM5C PE=2 SV=1	[more]

BLAST of HG10005913 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DIH3	3.6e-273	85.01	Remodeling and spacing factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S4DWX3	3.6e-273	85.01	remodeling and spacing factor 1 OS=Cucumis melo OX=3656 GN=LOC103490198 PE=4 SV=...	[more]
A0A6J1IEM0	2.0e-263	81.90	PHD finger protein EHD3-like OS=Cucurbita maxima OX=3661 GN=LOC111475137 PE=4 SV...	[more]
A0A6J1F863	3.7e-262	81.72	PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111442986 PE=4 ...	[more]
A0A6J1EE29	4.5e-252	79.45	PHD finger protein EHD3-like OS=Cucurbita moschata OX=3662 GN=LOC111433442 PE=4 ...	[more]

BLAST of HG10005913 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77250.1	1.2e-90	39.72	RING/FYVE/PHD-type zinc finger family protein	[more]
AT3G01460.1	2.8e-12	37.50	methyl-CPG-binding domain 9	[more]
AT5G24330.1	1.2e-10	46.81	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6	[more]
AT5G09790.1	1.9e-08	43.48	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5	[more]
AT5G09790.2	1.9e-08	43.48	ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 429..472 e-value: 4.2E-10 score: 49.6 coord: 266..312 e-value: 1.1E-8 score: 44.9 coord: 376..426 e-value: 0.065 score: 22.4
None	No IPR available	GENE3D	2.30.30.1150		coord: 202..314 e-value: 7.7E-15 score: 57.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 497..517
None	No IPR available	PANTHER	PTHR10615:SF190	D4, ISOFORM A	coord: 119..539
None	No IPR available	PANTHER	PTHR10615	HISTONE ACETYLTRANSFERASE	coord: 119..539
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 426..473 e-value: 9.8E-19 score: 69.0
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 267..312 e-value: 8.6E-8 score: 32.0 coord: 427..472 e-value: 1.7E-12 score: 47.0
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 264..314 score: 8.9293
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 424..474 score: 9.8727
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 427..475
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 260..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005913.1	HG10005913.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding