HG10005144 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10005144
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Nucleic acid-binding, OB-fold-like protein
Location	Chr08: 23156473 .. 23159042 (+)
RNA-Seq Expression	HG10005144
Synteny	HG10005144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGCCATACTCTTACAGTCAAGGTTGTGAATACGAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCCTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGGTAAATTTCAACAATATTTGAGGAGCCTGCACCATTTGTGTATTATTGTATCTTGTATGAAGCATACCAACTTTCTTCTTTATGTTTACATTCTGTATGTAATACTGAACATTTGACATTAATTGGTTCTCTATATCCACCTGCAACAGAAAAGGTGCAGGCAAGAGTTTTCATAACTGATTTATAGCACGTGTCTCACTCCTTGTCCACAATGTATTTACATATTTCACTGTAAAAGGTATAGGTTGTTTTGATACATTAACTTACTAGTAAATACTTCATAAAGGTTTGAGGCTTTTTATTGTCTTGAAATCAGTCGTGGACCTTTCTTTTTCAGTCAAGAAACTAGACTTTTTTTTTCTAAATGCTGGCATATACGGAGGCTGAAATACAAAAGCCGATTGAAATGTCATCCATACAAAAATTACCTTCTAAAGAACTGAGCACACGCTTTGTCGGTTATATATATTAGTTAGTGTAATGGCTAATAGTTGGATAATCACTTCAATAGTTCTATTACACGCCGATGTTGTATTAATGTGCATGCCATACATTTGAAAGGATAAACTCTTTGCTGAATCTTGAGAATAATAGATTTTGAAGGATTTGTCTGTATTATTTTGATTATGATCTTATGAGGGAAATTGGTTCTAGAAGGTCCATTAATTGTAGTTAATGTTGTTTCTATCACGGTCGCAGCTTATTTTATCTGTTGGTTACATAATGTATGTTTTTATGTTAGGATCTGATTATGCTTATGCATGTCACTGAGTGTTCATTGTTCTCAGTACTGTATGTTAATTGTATTCTTAAGCACGTGTAGATGCCTTGGAGATCAAGGGATCTTAGGCTATGTTATTCTTTGAGGGAGTAAGAAACTGAAAATTAATTGTCAACAATATTTAAAAATCATCTAGTTACCGAGATCTTCATGAAGCCAGCAATTTTGAGTTCTTGATTTTGGAGGAACTGCCAGCACCTAGGAATCTAGAGAGCTCCACCTAGAAATAGATGTTGTGTGATTGTTGTGTTTGTTTTGATGTCTATCAAATGCACTTAAATTAACACTTGTTTCAATTATTCACTTACTATTCGTTTTTTGTTAATTAGTTATATTAACTAACCTTATCATTTTTCCATATAGAGATTCCTTTCAATTACTCACTTGCTATGTTCTAAAACTTATTTTATTATAATATCTATTACCTCATTTAAATTGTATTAATTTGAGATTTTCTTATCATGTGTTAATTTATCATTTTCATGTTCTATCACACTTTTTCTGACATGACATGAATTCCAAAAATAACATCATAAGAATTATTATTTTCCTAGAATTAGTCAAATGAAATTGTTTATTTTTGTCTATTAAGAGATCCTTCTGGAATTAAGGAAATGAAGATTGCTATGCTTATTGCGAAACTGTTGAAAATAATGAAGAATAAGAATACAAGAAACTGTTGTGGTTGTTTTGTTCCTTCCTCCTCCTGAACAAGAATAGATAGAAGTTGTGAATTGTTGAATGGCAAAGTGGTTAACAACACCATAACTTTGTAGTTGGAGTTGCAAAAAAAACTGTTCCTCCTACATAGGCAGATGAAAGAGGTGGACAAGAATGGAATTTTGTGAAGCTAGGTTCATGGTTTGGCAGAGGGGAATATGTGGTGCTGGAATGGGATAGTTATATATAAGGTCAGGCGGATTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCGAACACTCACGGATATAAAAAAAAAAAAAGAAAAAAAAAGATAGTTATATATAGATGATATTTGTTGCAGATCAAACTCATTGTTAAATATATCCGTGTTTGACTTTTACCTGTACCATATCTTTGTATAGCTTATCCTTGTTCATGAGATTACTAAATTATGTCATCTCAAATTCACTTGAACGGTCAGGAAAATTTTATTAGTTCATTGTACACGATTTTAATTCCAACTGACCCCTATCCTGTTTGATTAACCAGTCCTTGGCGTAGAATTGATTTTAATTTTGAATCTTTCCTTGTAGCCACAGTTTTATTTGTTTGCTTGAATGAGTATTTCTTTTGGTGGACATATTTTAGTGGCATTAAAGTTTCCGTAACTCATTTACTCGTATGTCTTTGCTTTCTTCCGTGTAGTGGACTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCCACTTTCACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTCGTGGAAGAGTGA

mRNA sequence

ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGCCATACTCTTACAGTCAAGGTTGTGAATACGAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCCTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGTGGACTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCCACTTTCACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTCGTGGAAGAGTGA

Coding sequence (CDS)

ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCGGGCACTAGTGGCCATACTCTTACAGTCAAGGTTGTGAATACGAAGATGGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCTGAATGCCTAGTGGGTGATGAGACTGGAATGATCATATTTACTGCCAGAAATGATCAAGTGGACTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGACTTGCTGTGGACAGGTGGGGCCGAGTTGAAGTTACTGAGCCTGCCACTTTCACTGTTAAGGAAGATAACAATCTTTCACTCATTGAATATGAACTCGTGAATGTCGTGGAAGAGTGA

Protein sequence

MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDNNLSLIEYELVNVVEE

Homology

[Close]

BLAST of HG10005144 vs. NCBI nr
Match: XP_038883981.1 (uncharacterized protein At4g28440 [Benincasa hispida])

HSP 1 Score: 272.3 bits (695), Expect = 2.2e-69
Identity = 136/137 (99.27%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTK+DQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKIDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. NCBI nr
Match: XP_004142984.1 (uncharacterized protein At4g28440 [Cucumis sativus] >XP_008444318.1 PREDICTED: uncharacterized protein At4g28440 isoform X1 [Cucumis melo] >XP_008444319.1 PREDICTED: uncharacterized protein At4g28440 isoform X1 [Cucumis melo] >XP_011649474.1 uncharacterized protein At4g28440 [Cucumis sativus] >KAA0061088.1 Nucleic acid-binding protein [Cucumis melo var. makuwa] >KGN62287.1 hypothetical protein Csa_018609 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 6.5e-69
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. NCBI nr
Match: XP_022951207.1 (uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_023001948.1 uncharacterized protein At4g28440-like [Cucurbita maxima] >XP_023538137.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo] >XP_023538138.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo] >KAG7020076.1 hypothetical protein SDJN02_16758 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.3 bits (682), Expect = 7.2e-68
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRLAVDRWGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           +NNLSLIEYELVNVVEE
Sbjct: 121 ENNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. NCBI nr
Match: XP_022961781.1 (uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_022961782.1 uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_023545751.1 uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLIVKVVNAKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPAAFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. NCBI nr
Match: XP_022131585.1 (uncharacterized protein At4g28440-like [Momordica charantia])

HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67
Identity = 133/137 (97.08%), Postives = 135/137 (98.54%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQVRQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRLAVDRWGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDMMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

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BLAST of HG10005144 vs. ExPASy Swiss-Prot
Match: O49453 (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.4e-44
Identity = 88/132 (66.67%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 9   RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDE 68
           RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDE
Sbjct: 18  RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77

Query: 69  TGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDN 128
           TG I+FTARNDQVDLMK GAT+ LRN++IDMFKG+MRL VD+WGR+E T  A+FTVKEDN
Sbjct: 78  TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 137

Query: 129 NLSLIEYELVNV 135
           NLSL+EYEL+NV
Sbjct: 138 NLSLVEYELINV 149

[Close]

BLAST of HG10005144 vs. ExPASy TrEMBL
Match: A0A1S3BA24 (uncharacterized protein At4g28440 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487687 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. ExPASy TrEMBL
Match: A0A5A7V0K6 (Nucleic acid-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002290 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. ExPASy TrEMBL
Match: A0A0A0LNA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348250 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPA FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPANFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           DNNLSLIEYELVNVVEE
Sbjct: 121 DNNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. ExPASy TrEMBL
Match: A0A6J1KS21 (uncharacterized protein At4g28440-like OS=Cucurbita maxima OX=3661 GN=LOC111495976 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-68
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRLAVDRWGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           +NNLSLIEYELVNVVEE
Sbjct: 121 ENNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. ExPASy TrEMBL
Match: A0A6J1GH14 (uncharacterized protein At4g28440-like OS=Cucurbita moschata OX=3662 GN=LOC111454116 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-68
Identity = 134/137 (97.81%), Postives = 136/137 (99.27%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60
           MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG
Sbjct: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVG 60

Query: 61  DETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKE 120
           DETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRLAVDRWGRVEVTEPA+FTVKE
Sbjct: 61  DETGMIIFTARNDQVDLMKEGATIILRNAKIDMFKGSMRLAVDRWGRVEVTEPASFTVKE 120

Query: 121 DNNLSLIEYELVNVVEE 138
           +NNLSLIEYELVNVVEE
Sbjct: 121 ENNLSLIEYELVNVVEE 137

[Close]

BLAST of HG10005144 vs. TAIR 10
Match: AT1G23750.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-61
Identity = 113/137 (82.48%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 1   MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLV 60
           MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+V
Sbjct: 1   MADSTKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIV 60

Query: 61  GDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVK 120
           GDETG+I+FTARNDQVDLMKEG+T+TLRNAKIDM+KGSMRLAVD+WGRVEVTEPA+F VK
Sbjct: 61  GDETGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVK 120

Query: 121 EDNNLSLIEYELVNVVE 137
           ED N+SLIEYELVNVVE
Sbjct: 121 EDTNMSLIEYELVNVVE 137

[Close]

BLAST of HG10005144 vs. TAIR 10
Match: AT1G10590.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-56
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECL 60
           MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECL
Sbjct: 1   MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 60

Query: 61  VGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVT-EPATFT 120
           VGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSMRLAVDRWGRVEV  EP   T
Sbjct: 61  VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 120

Query: 121 VKEDNNLSLIEYELVNV 135
           VK+DNNLSLIEYELV+V
Sbjct: 121 VKDDNNLSLIEYELVSV 137

[Close]

BLAST of HG10005144 vs. TAIR 10
Match: AT1G10590.3 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-56
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECL 60
           MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECL
Sbjct: 15  MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 74

Query: 61  VGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVT-EPATFT 120
           VGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSMRLAVDRWGRVEV  EP   T
Sbjct: 75  VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 134

Query: 121 VKEDNNLSLIEYELVNV 135
           VK+DNNLSLIEYELV+V
Sbjct: 135 VKDDNNLSLIEYELVSV 151

[Close]

BLAST of HG10005144 vs. TAIR 10
Match: AT1G10590.2 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 216.9 bits (551), Expect = 1.0e-56
Identity = 109/137 (79.56%), Postives = 124/137 (90.51%), Query Frame = 0


Query: 1   MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECL 60
           MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECL
Sbjct: 1   MAEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECL 60

Query: 61  VGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVT-EPATFT 120
           VGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSMRLAVDRWGRVEV  EP   T
Sbjct: 61  VGDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDIT 120

Query: 121 VKEDNNLSLIEYELVNV 135
           VK+DNNLSLIEYELV+V
Sbjct: 121 VKDDNNLSLIEYELVSV 137

[Close]

BLAST of HG10005144 vs. TAIR 10
Match: AT2G33845.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 194.9 bits (494), Expect = 4.2e-50
Identity = 98/130 (75.38%), Postives = 108/130 (83.08%), Query Frame = 0


Query: 9   RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMII 68
           +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+
Sbjct: 53  KKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKPGAASSSHLRPARISECLVGDETACIL 112

Query: 69  FTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEVTEPATFTVKEDNNLSLI 128
           FTARNDQV+LMK GAT+ LRNAKIDMFKGSMRLAVD+WGR+E TEPA  TVKEDNNLSL+
Sbjct: 113 FTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPADITVKEDNNLSLV 172

Query: 129 EYELVNVVEE 138
           EYELVNVVEE
Sbjct: 173 EYELVNVVEE 182

The following BLAST results are available for this feature:

BLAST of HG10005144 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883981.1	2.2e-69	99.27	uncharacterized protein At4g28440 [Benincasa hispida]	[more]
XP_004142984.1	6.5e-69	99.27	uncharacterized protein At4g28440 [Cucumis sativus] >XP_008444318.1 PREDICTED: u...	[more]
XP_022951207.1	7.2e-68	97.81	uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_023001948.1 unch...	[more]
XP_022961781.1	1.2e-67	97.81	uncharacterized protein At4g28440-like [Cucurbita moschata] >XP_022961782.1 unch...	[more]
XP_022131585.1	1.2e-67	97.08	uncharacterized protein At4g28440-like [Momordica charantia]	[more]

BLAST of HG10005144 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49453	4.4e-44	66.67	Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 P...	[more]

BLAST of HG10005144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BA24	3.2e-69	99.27	uncharacterized protein At4g28440 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5A7V0K6	3.2e-69	99.27	Nucleic acid-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A0A0LNA1	3.2e-69	99.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348250 PE=4 SV=1	[more]
A0A6J1KS21	3.5e-68	97.81	uncharacterized protein At4g28440-like OS=Cucurbita maxima OX=3661 GN=LOC1114959...	[more]
A0A6J1GH14	3.5e-68	97.81	uncharacterized protein At4g28440-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of HG10005144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23750.1	1.4e-61	82.48	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.1	1.0e-56	79.56	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.3	1.0e-56	79.56	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.2	1.0e-56	79.56	Nucleic acid-binding, OB-fold-like protein	[more]
AT2G33845.1	4.2e-50	75.38	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 23..126 e-value: 9.9E-44 score: 149.8
None	No IPR available	PANTHER	PTHR31472:SF28	BNAA07G09820D PROTEIN	coord: 1..136
None	No IPR available	PANTHER	PTHR31472	OS05G0244600 PROTEIN	coord: 1..136
None	No IPR available	CDD	cd04491	SoSSB_OBF	coord: 27..110 e-value: 9.55985E-17 score: 68.0333
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 6..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10005144.1	HG10005144.1	mRNA