HG10004392 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10004392
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr08: 16576403 .. 16576813 (-)
RNA-Seq ExpressionHG10004392
SyntenyHG10004392
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAACAGAGTCAGAGAGAGCTTGGCTATTTCTGTTATCAGCTTCAAAAAAGGTTGCCTGCCATGGCAGATTACACAGAACCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTCTCAGTGCAATTAATAAAGGAAGAGAAAAACAAATGGCCTTACCGACTCCGCTCCCTAATTAATACTTCACAGATACAGTATTCAATTATATTCCCTTCAATTAACCTAAACCTAACTTCAAATTACTTACCAAATCAAATATCTGCTCTTCCTCCTCCTTCTTCTTCACCGGAATTTCTCCCCGAAGCTCCGCCGCATGCCGCGTCGCCGATCACCGGACAAGAACAATCGAAAAGGCGTCCGATGTTCCTCTCCGATTCTCCGATCCTCTCTCGCTTATATCGTAATTGA

mRNA sequence

ATGGTGGAACAGAGTCAGAGAGAGCTTGGCTATTTCTGTTATCAGCTTCAAAAAAGGTTGCCTGCCATGGCAGATTACACAGAACCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTCTCAGTGCAATTAATAAAGGAAGAGAAAAACAAATGGCCTTACCGACTCCGCTCCCTAATTAATACTTCACAGATACAGTATTCAATTATATTCCCTTCAATTAACCTAAACCTAACTTCAAATTACTTACCAAATCAAATATCTGCTCTTCCTCCTCCTTCTTCTTCACCGGAATTTCTCCCCGAAGCTCCGCCGCATGCCGCGTCGCCGATCACCGGACAAGAACAATCGAAAAGGCGTCCGATGTTCCTCTCCGATTCTCCGATCCTCTCTCGCTTATATCGTAATTGA

Coding sequence (CDS)

ATGGTGGAACAGAGTCAGAGAGAGCTTGGCTATTTCTGTTATCAGCTTCAAAAAAGGTTGCCTGCCATGGCAGATTACACAGAACCTCTTTCTCTTTCTCTTTCTCTTTCTCTTTCTCTCTCAGTGCAATTAATAAAGGAAGAGAAAAACAAATGGCCTTACCGACTCCGCTCCCTAATTAATACTTCACAGATACAGTATTCAATTATATTCCCTTCAATTAACCTAAACCTAACTTCAAATTACTTACCAAATCAAATATCTGCTCTTCCTCCTCCTTCTTCTTCACCGGAATTTCTCCCCGAAGCTCCGCCGCATGCCGCGTCGCCGATCACCGGACAAGAACAATCGAAAAGGCGTCCGATGTTCCTCTCCGATTCTCCGATCCTCTCTCGCTTATATCGTAATTGA

Protein sequence

MVEQSQRELGYFCYQLQKRLPAMADYTEPLSLSLSLSLSLSVQLIKEEKNKWPYRLRSLINTSQIQYSIIFPSINLNLTSNYLPNQISALPPPSSSPEFLPEAPPHAASPITGQEQSKRRPMFLSDSPILSRLYRN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..136

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10004392.1HG10004392.1mRNA