HG10004322 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10004322
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ankyrin repeat-containing protein
Location	Chr08: 16008289 .. 16008870 (+)
RNA-Seq Expression	HG10004322
Synteny	HG10004322

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAACTGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTGGGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTGGTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTCAACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTATGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA

mRNA sequence

ATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAACTGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTGGGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTGGTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTCAACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTATGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA

Coding sequence (CDS)

ATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAACTGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTGGGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTGGTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTCAACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTATGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA

Protein sequence

MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSSS

Homology

[Close]

BLAST of HG10004322 vs. NCBI nr
Match: XP_008445596.1 (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo] >KAA0064718.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa] >TYK00738.1 ankyrin repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 298.5 bits (763), Expect = 4.1e-77
Identity = 152/193 (78.76%), Postives = 169/193 (87.56%), Query Frame = 0


Query: 1   MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGT 60
           MSRQ+ G E   S+AI+ID+    H + +     NW+REDTDFLMVVTTF+ATVAFQIGT
Sbjct: 1   MSRQNNGAE---SVAITIDTTETGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGT 60

Query: 61  NPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP-A 120
           NPPGGVWQ+DDKQGKYFAGKSIMATKSPS+FSG+LVTITACFV SA+QFAVLFLKKWP  
Sbjct: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVG 120

Query: 121 EKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAI 180
            K+WS SRFILYSTMGLAISSMGI+YGCSVRAYTPDSEE TR VISFITMLGFP+GLAAI
Sbjct: 121 AKNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAI 180

Query: 181 SLYLQFLNKSSSS 193
           SLYL++ NKSSSS
Sbjct: 181 SLYLEYFNKSSSS 190

[Close]

BLAST of HG10004322 vs. NCBI nr
Match: XP_011657373.1 (uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hypothetical protein Csa_019050 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 8.0e-73
Identity = 145/193 (75.13%), Postives = 162/193 (83.94%), Query Frame = 0


Query: 1   MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGT 60
           MSRQ+    E+ ++ I     TG H + +     NWMREDTDFLMVVTTF+ATVAFQIGT
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTG-HEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGT 60

Query: 61  NPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP-A 120
           NPPGGVWQ+DDKQGKYFAGKSIMATKSPS+F GFLVTITACFV SA+QFAVLFLKKWP  
Sbjct: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVG 120

Query: 121 EKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAI 180
            K+WS SRFILYSTMGLA+SSMG +YGCSVRAYTPDSEE T  VISFITMLGFP+ LAAI
Sbjct: 121 AKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAI 180

Query: 181 SLYLQFLNKSSSS 193
           S+YLQ+ +KSSSS
Sbjct: 181 SIYLQYFSKSSSS 192

[Close]

BLAST of HG10004322 vs. NCBI nr
Match: XP_016899921.1 (PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 4.9e-30
Identity = 84/183 (45.90%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 5   SKGVEETASLAISIDSVTGNHREAEN---KKMGNWMREDTDFLMVVTTFLATVAFQIGTN 64
           S+ VE+ + L+I  D  T N ++ EN   KK       D DFLMV TTF+A +AFQ GTN
Sbjct: 2   SRKVEDESVLSIETDQ-TINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN 61

Query: 65  PPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEK 124
           PPGGVWQDD+    Y AGKSIMATKSPS F  F+  +T CF  SA+QF VL  K   +EK
Sbjct: 62  PPGGVWQDDNSP-NYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKS--SEK 121

Query: 125 SWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISL 184
           SWSVS+  +Y TMG  IS++ ++Y  +++A TP++ + +  ++   T L   + +  IS+
Sbjct: 122 SWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEA-QMSHVIVMLKTTLVLSVVVLPISM 179

[Close]

BLAST of HG10004322 vs. NCBI nr
Match: XP_022973456.1 (uncharacterized protein LOC111471995 [Cucurbita maxima])

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-28
Identity = 79/166 (47.59%), Postives = 106/166 (63.86%), Query Frame = 0


Query: 23  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSI 82
           GN RE +NK+   W + D ++L+VV TF+ATVAFQ G +PPGGVWQ DDK     AG SI
Sbjct: 14  GNGREDQNKE-ETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSI 73

Query: 83  MATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMG 142
           MATK P+EF+ F+V +T C ++S LQF VL L + P++   S+SR  LY T+  A+ SM 
Sbjct: 74  MATKFPAEFTTFIVGVTVCMIVSMLQFIVL-LNELPSDTP-SLSRKYLYYTLFFALGSML 133

Query: 143 ISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNK 189
            SY  SV+AYTP+     R V   +  +G  + L  ISL+ Q + K
Sbjct: 134 SSYVSSVKAYTPE-PMIPRAVTVLVFSIGSGVVLVGISLFKQKIEK 175

[Close]

BLAST of HG10004322 vs. NCBI nr
Match: XP_022949196.1 (uncharacterized protein LOC111452618 [Cucurbita moschata])

HSP 1 Score: 136.3 bits (342), Expect = 2.7e-28
Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 0


Query: 23  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSI 82
           GN  E +NK+   W + D ++L++V TF+ATVAFQ G +PPGGVWQ DDK     AG SI
Sbjct: 27  GNGGEDQNKE-ETWQKRDREYLLIVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSI 86

Query: 83  MATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMG 142
           MATK P+EF+ F+V +T C ++S LQF VLF+ + P++   S+SR  LY T+  A+ SM 
Sbjct: 87  MATKFPAEFTTFVVGVTVCMIVSMLQFIVLFV-ELPSDTP-SLSRKYLYYTLFFALGSML 146

Query: 143 ISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ 185
            SY  SV+AYTP+S  T    +  +T +G  + L  ISL+ Q
Sbjct: 147 SSYVSSVKAYTPESMRTQTITVLALT-IGIGVVLVGISLFKQ 184

[Close]

BLAST of HG10004322 vs. ExPASy TrEMBL
Match: A0A5A7VAU9 (Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00280 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 152/193 (78.76%), Postives = 169/193 (87.56%), Query Frame = 0


Query: 1   MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGT 60
           MSRQ+ G E   S+AI+ID+    H + +     NW+REDTDFLMVVTTF+ATVAFQIGT
Sbjct: 1   MSRQNNGAE---SVAITIDTTETGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGT 60

Query: 61  NPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP-A 120
           NPPGGVWQ+DDKQGKYFAGKSIMATKSPS+FSG+LVTITACFV SA+QFAVLFLKKWP  
Sbjct: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVG 120

Query: 121 EKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAI 180
            K+WS SRFILYSTMGLAISSMGI+YGCSVRAYTPDSEE TR VISFITMLGFP+GLAAI
Sbjct: 121 AKNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAI 180

Query: 181 SLYLQFLNKSSSS 193
           SLYL++ NKSSSS
Sbjct: 181 SLYLEYFNKSSSS 190

[Close]

BLAST of HG10004322 vs. ExPASy TrEMBL
Match: A0A1S3BD33 (uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 2.0e-77
Identity = 152/193 (78.76%), Postives = 169/193 (87.56%), Query Frame = 0


Query: 1   MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGT 60
           MSRQ+ G E   S+AI+ID+    H + +     NW+REDTDFLMVVTTF+ATVAFQIGT
Sbjct: 1   MSRQNNGAE---SVAITIDTTETGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGT 60

Query: 61  NPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP-A 120
           NPPGGVWQ+DDKQGKYFAGKSIMATKSPS+FSG+LVTITACFV SA+QFAVLFLKKWP  
Sbjct: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVG 120

Query: 121 EKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAI 180
            K+WS SRFILYSTMGLAISSMGI+YGCSVRAYTPDSEE TR VISFITMLGFP+GLAAI
Sbjct: 121 AKNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAI 180

Query: 181 SLYLQFLNKSSSS 193
           SLYL++ NKSSSS
Sbjct: 181 SLYLEYFNKSSSS 190

[Close]

BLAST of HG10004322 vs. ExPASy TrEMBL
Match: A0A0A0KGU1 (PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.9e-73
Identity = 145/193 (75.13%), Postives = 162/193 (83.94%), Query Frame = 0


Query: 1   MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGT 60
           MSRQ+    E+ ++ I     TG H + +     NWMREDTDFLMVVTTF+ATVAFQIGT
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTG-HEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGT 60

Query: 61  NPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP-A 120
           NPPGGVWQ+DDKQGKYFAGKSIMATKSPS+F GFLVTITACFV SA+QFAVLFLKKWP  
Sbjct: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVG 120

Query: 121 EKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAI 180
            K+WS SRFILYSTMGLA+SSMG +YGCSVRAYTPDSEE T  VISFITMLGFP+ LAAI
Sbjct: 121 AKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAI 180

Query: 181 SLYLQFLNKSSSS 193
           S+YLQ+ +KSSSS
Sbjct: 181 SIYLQYFSKSSSS 192

[Close]

BLAST of HG10004322 vs. ExPASy TrEMBL
Match: A0A1S4DVA8 (uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.4e-30
Identity = 84/183 (45.90%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 5   SKGVEETASLAISIDSVTGNHREAEN---KKMGNWMREDTDFLMVVTTFLATVAFQIGTN 64
           S+ VE+ + L+I  D  T N ++ EN   KK       D DFLMV TTF+A +AFQ GTN
Sbjct: 2   SRKVEDESVLSIETDQ-TINEKDKENQKKKKKKEGEGRDRDFLMVATTFIAAMAFQAGTN 61

Query: 65  PPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEK 124
           PPGGVWQDD+    Y AGKSIMATKSPS F  F+  +T CF  SA+QF VL  K   +EK
Sbjct: 62  PPGGVWQDDNSP-NYEAGKSIMATKSPSLFISFMSGVTVCFACSAMQFIVLLGKS--SEK 121

Query: 125 SWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISL 184
           SWSVS+  +Y TMG  IS++ ++Y  +++A TP++ + +  ++   T L   + +  IS+
Sbjct: 122 SWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEA-QMSHVIVMLKTTLVLSVVVLPISM 179

[Close]

BLAST of HG10004322 vs. ExPASy TrEMBL
Match: A0A6J1I8P6 (uncharacterized protein LOC111471995 OS=Cucurbita maxima OX=3661 GN=LOC111471995 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28
Identity = 79/166 (47.59%), Postives = 106/166 (63.86%), Query Frame = 0


Query: 23  GNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSI 82
           GN RE +NK+   W + D ++L+VV TF+ATVAFQ G +PPGGVWQ DDK     AG SI
Sbjct: 14  GNGREDQNKE-ETWQKRDREYLLVVVTFMATVAFQAGVSPPGGVWQQDDKNSSIVAGTSI 73

Query: 83  MATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMG 142
           MATK P+EF+ F+V +T C ++S LQF VL L + P++   S+SR  LY T+  A+ SM 
Sbjct: 74  MATKFPAEFTTFIVGVTVCMIVSMLQFIVL-LNELPSDTP-SLSRKYLYYTLFFALGSML 133

Query: 143 ISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNK 189
            SY  SV+AYTP+     R V   +  +G  + L  ISL+ Q + K
Sbjct: 134 SSYVSSVKAYTPE-PMIPRAVTVLVFSIGSGVVLVGISLFKQKIEK 175

[Close]

BLAST of HG10004322 vs. TAIR 10
Match: AT3G13950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13266.1); Has 339 Blast hits to 265 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.4e-06
Identity = 19/41 (46.34%), Postives = 28/41 (68.29%), Query Frame = 0


Query: 31 KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDD 72
          K+ G+W+ +    LMV  T +A ++FQ+  NPPGGVWQ D+
Sbjct: 24 KRQGDWLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSDN 64

[Close]

BLAST of HG10004322 vs. TAIR 10
Match: AT5G54710.1 (Ankyrin repeat family protein )

HSP 1 Score: 45.4 bits (106), Expect = 5.9e-05
Identity = 41/161 (25.47%), Postives = 75/161 (46.58%), Query Frame = 0


Query: 26  REAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMAT 85
           R  E +     ++   + + +V   +A+VAF  G NPPGGV QD    GK  AG++ +A 
Sbjct: 409 RNKEREMHSESLQNARNTITIVAVLIASVAFTCGINPPGGVHQDGPFIGKATAGRT-LAF 468

Query: 86  KSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISY 145
           K  S  +  +   T+  +++ L   + +       K+  +   I +  M LA++SM  +Y
Sbjct: 469 KIFS-VANNIALFTSLSIVTLLVSIISY-----RTKALKMCVVIAHKMMWLAVASMATAY 528

Query: 146 GCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFL 187
             S     P +E +   V +   +    LG  ++ +Y+ F+
Sbjct: 529 AASAWITVPHNEGSKWLVYTTSAIASVALG--SMFVYVSFM 560

[Close]

BLAST of HG10004322 vs. TAIR 10
Match: AT1G34050.1 (Ankyrin repeat family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 33/129 (25.58%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 29  ENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSP 88
           E+K     +    + + +V   +A+VAF  G NPPGGV+Q+   +GK  AG++ +A +  
Sbjct: 384 ESKMHAEALLNARNTITIVAVLIASVAFTCGINPPGGVYQEGPYKGKSTAGRT-LAFQVF 443

Query: 89  SEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCS 148
           S  +   +  + C V+  L  +++  +  P +    ++  IL+    +A++SM ++Y  +
Sbjct: 444 SISNNIALFTSLCIVI--LLVSIIPYRTRPLKNFLKLTHRILW----VAVASMALAYVSA 503

Query: 149 VRAYTPDSE 158
                P  E
Sbjct: 504 ASIIIPHVE 505

[Close]

BLAST of HG10004322 vs. TAIR 10
Match: AT4G13266.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 34 GNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGK 76
          G+W+ +    L+V  T +A ++F +  NPPGGVWQ +D   K
Sbjct: 29 GDWLEKTRGNLVVAATVIAAMSFGVMVNPPGGVWQSEDCSSK 70

The following BLAST results are available for this feature:

BLAST of HG10004322 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445596.1	4.1e-77	78.76	PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo] >KAA0064718.1 ank...	[more]
XP_011657373.1	8.0e-73	75.13	uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hypothetical ...	[more]
XP_016899921.1	4.9e-30	45.90	PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]	[more]
XP_022973456.1	2.7e-28	47.59	uncharacterized protein LOC111471995 [Cucurbita maxima]	[more]
XP_022949196.1	2.7e-28	47.53	uncharacterized protein LOC111452618 [Cucurbita moschata]	[more]

BLAST of HG10004322 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10004322 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAU9	2.0e-77	78.76	Ankyrin repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BD33	2.0e-77	78.76	uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=...	[more]
A0A0A0KGU1	3.9e-73	75.13	PGG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV...	[more]
A0A1S4DVA8	2.4e-30	45.90	uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=...	[more]
A0A6J1I8P6	1.3e-28	47.59	uncharacterized protein LOC111471995 OS=Cucurbita maxima OX=3661 GN=LOC111471995...	[more]

BLAST of HG10004322 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13950.1	2.4e-06	46.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G54710.1	5.9e-05	25.47	Ankyrin repeat family protein	[more]
AT1G34050.1	1.0e-04	25.58	Ankyrin repeat family protein	[more]
AT4G13266.1	1.0e-04	40.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 35..149 e-value: 1.5E-20 score: 73.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10004322.1	HG10004322.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane