HG10003618 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCATTACTTTCAAGCTCTTCTTTCTCATTTCTTTGCTAGCTCTTGTTCTTCCTACCTCCATGGCTATGTATGGCGGTAGCATGGCGTTGGATGCTACCACGACGATGGATTGTTTGAACCCTTTGCTTCAATCGTGTAGGAATGAAATAGTGGCGTTCACTATAAATAGCGGTTTAGTCGTTATACGTCCAGCTTGTTGCCAAGTAATTCTAAATTTTCGTCGTGAATGTTTGTCTGAATTTCTTAGTTCACTAGGGATTACTGTCCAAGACTTCAATATTCTTGAATCTTATTGCAAATTGATTGCAAAGTTTCCACCTTCTCAGTTATCACCATGA ATGGCTTCCATTACTTTCAAGCTCTTCTTTCTCATTTCTTTGCTAGCTCTTGTTCTTCCTACCTCCATGGCTATGTATGGCGGTAGCATGGCGTTGGATGCTACCACGACGATGGATTGTTTGAACCCTTTGCTTCAATCGTGTAGGAATGAAATAGTGGCGTTCACTATAAATAGCGGTTTAGTCGTTATACGTCCAGCTTGTTGCCAAGTAATTCTAAATTTTCGTCGTGAATGTTTGTCTGAATTTCTTAGTTCACTAGGGATTACTGTCCAAGACTTCAATATTCTTGAATCTTATTGCAAATTGATTGCAAAGTTTCCACCTTCTCAGTTATCACCATGA ATGGCTTCCATTACTTTCAAGCTCTTCTTTCTCATTTCTTTGCTAGCTCTTGTTCTTCCTACCTCCATGGCTATGTATGGCGGTAGCATGGCGTTGGATGCTACCACGACGATGGATTGTTTGAACCCTTTGCTTCAATCGTGTAGGAATGAAATAGTGGCGTTCACTATAAATAGCGGTTTAGTCGTTATACGTCCAGCTTGTTGCCAAGTAATTCTAAATTTTCGTCGTGAATGTTTGTCTGAATTTCTTAGTTCACTAGGGATTACTGTCCAAGACTTCAATATTCTTGAATCTTATTGCAAATTGATTGCAAAGTTTCCACCTTCTCAGTTATCACCATGA MASITFKLFFLISLLALVLPTSMAMYGGSMALDATTTMDCLNPLLQSCRNEIVAFTINSGLVVIRPACCQVILNFRRECLSEFLSSLGITVQDFNILESYCKLIAKFPPSQLSP Homology
BLAST of HG10003618 vs. NCBI nr
Match: KAA0035017.1 (egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa] >TYK02355.1 egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa]) HSP 1 Score: 185.7 bits (470), Expect = 2.3e-43 Identity = 94/114 (82.46%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of HG10003618 vs. NCBI nr
Match: KGN45861.1 (hypothetical protein Csa_005369 [Cucumis sativus]) HSP 1 Score: 182.6 bits (462), Expect = 1.9e-42 Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of HG10003618 vs. NCBI nr
Match: PON83529.1 (Prolamin-like domain containing protein [Trema orientale]) HSP 1 Score: 60.8 bits (146), Expect = 8.5e-06 Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of HG10003618 vs. NCBI nr
Match: PON60757.1 (Prolamin-like domain containing protein [Parasponia andersonii]) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05 Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of HG10003618 vs. NCBI nr
Match: KAF3946652.1 (hypothetical protein CMV_027106 [Castanea mollissima]) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-05 Identity = 46/118 (38.98%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy Swiss-Prot
Match: Q9T039 (Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana OX=3702 GN=EC1.4 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.0e-05 Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy Swiss-Prot
Match: Q9SJ24 (Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana OX=3702 GN=EC1.2 PE=2 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04 Identity = 37/110 (33.64%), Postives = 55/110 (50.00%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy Swiss-Prot
Match: Q9SJ23 (Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana OX=3702 GN=EC1.3 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.7e-04 Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy TrEMBL
Match: A0A5D3BT50 (Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00520 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43 Identity = 94/114 (82.46%), Postives = 104/114 (91.23%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy TrEMBL
Match: A0A0A0KDK2 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014810 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 9.4e-43 Identity = 93/110 (84.55%), Postives = 100/110 (90.91%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy TrEMBL
Match: A0A2P5EDA6 (Prolamin-like domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_206840 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06 Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy TrEMBL
Match: A0A2P5CI82 (Prolamin-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_150540 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 7.1e-06 Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of HG10003618 vs. ExPASy TrEMBL
Match: A0A5D2L1W4 (Prolamin_like domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D05G301200v1 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 2.1e-05 Identity = 38/112 (33.93%), Postives = 57/112 (50.89%), Query Frame = 0
BLAST of HG10003618 vs. TAIR 10
Match: AT4G39340.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06 Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = 0
BLAST of HG10003618 vs. TAIR 10
Match: AT2G21740.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 47.4 bits (111), Expect = 9.1e-06 Identity = 37/110 (33.64%), Postives = 55/110 (50.00%), Query Frame = 0
BLAST of HG10003618 vs. TAIR 10
Match: AT2G21750.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 45.8 bits (107), Expect = 2.6e-05 Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 0
BLAST of HG10003618 vs. TAIR 10
Match: AT5G64720.1 (Protein of unknown function (DUF1278) ) HSP 1 Score: 42.0 bits (97), Expect = 3.8e-04 Identity = 31/90 (34.44%), Postives = 43/90 (47.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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