HG10002289 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTTGCCGAATCACCTTTGATACTGAGCGCCGCCACATCGTGTGCACGCGCCGCCATCTCCGCCGTCGTGAAAGTCCCAAGCCAAATCCGAGATTTCTTCCTCGGCTGCCGGATCTCCGACACCCATTTGCCCCAACTCCTCCTCCGTACGCCTCTGTAA ATGGCTTTTGCCGAATCACCTTTGATACTGAGCGCCGCCACATCGTGTGCACGCGCCGCCATCTCCGCCGTCGTGAAAGTCCCAAGCCAAATCCGAGATTTCTTCCTCGGCTGCCGGATCTCCGACACCCATTTGCCCCAACTCCTCCTCCGTACGCCTCTGTAA ATGGCTTTTGCCGAATCACCTTTGATACTGAGCGCCGCCACATCGTGTGCACGCGCCGCCATCTCCGCCGTCGTGAAAGTCCCAAGCCAAATCCGAGATTTCTTCCTCGGCTGCCGGATCTCCGACACCCATTTGCCCCAACTCCTCCTCCGTACGCCTCTGTAA MAFAESPLILSAATSCARAAISAVVKVPSQIRDFFLGCRISDTHLPQLLLRTPL Homology
BLAST of HG10002289 vs. NCBI nr
Match: CAA2616491.1 (unnamed protein product [Spirodela intermedia] >CAA7391632.1 unnamed protein product [Spirodela intermedia]) HSP 1 Score: 80.9 bits (198), Expect = 3.8e-12 Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of HG10002289 vs. NCBI nr
Match: PPD82210.1 (hypothetical protein GOBAR_DD20833 [Gossypium barbadense]) HSP 1 Score: 79.3 bits (194), Expect = 1.1e-11 Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of HG10002289 vs. NCBI nr
Match: KAF5776266.1 (hypothetical protein HanXRQr2_Chr12g0522381 [Helianthus annuus]) HSP 1 Score: 75.9 bits (185), Expect = 1.2e-10 Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of HG10002289 vs. NCBI nr
Match: CAA7410804.1 (unnamed protein product [Spirodela intermedia]) HSP 1 Score: 75.1 bits (183), Expect = 2.1e-10 Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 0
BLAST of HG10002289 vs. NCBI nr
Match: VVV77779.1 (unnamed protein product, partial [Nymphaea colorata]) HSP 1 Score: 74.7 bits (182), Expect = 2.7e-10 Identity = 39/50 (78.00%), Postives = 42/50 (84.00%), Query Frame = 0
BLAST of HG10002289 vs. ExPASy TrEMBL
Match: A0A0A0L8D6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G455120 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.6e-16 Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of HG10002289 vs. ExPASy TrEMBL
Match: A0A7I8K3J4 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_02002710 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 1.8e-12 Identity = 41/50 (82.00%), Postives = 44/50 (88.00%), Query Frame = 0
BLAST of HG10002289 vs. ExPASy TrEMBL
Match: A0A7C9DWE3 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.5e-11 Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of HG10002289 vs. ExPASy TrEMBL
Match: A0A1J3K9H9 (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR23491_c0_g1_i1_g.68307 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.5e-11 Identity = 40/53 (75.47%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of HG10002289 vs. ExPASy TrEMBL
Match: A0A251SY65 (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr12g0355091 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.9e-11 Identity = 39/54 (72.22%), Postives = 44/54 (81.48%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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