HG10000664 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10000664
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RNA-binding protein Musashi homolog 1
Location	Chr09: 7824412 .. 7836932 (+)
RNA-Seq Expression	HG10000664
Synteny	HG10000664

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCGGTGAGATTGATTTGGTATTTGACTATCGTGTGTGAGAAAGAGGTGTGCCTCTTCTTGTTATCATGTGCAGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGTGGGTCTTTGAGCGAGCGAGCGAGCGAGGAAGAAGAGGAGGAGAGAGAGATATACTTTTTCACTTTTAGGGTTCAATTTCTCTTCGTTAGCTGCGCCAATTCATCATGGATCGGAAGCTGGTGGTTAGTATTTTCTTTTTTCCCCTATTCAGCTTCGTTTTTGTGATTTTTCAGTTGTTTCTTCTATTAAGTGATCTGGTTTCACAATTGGGTTTTTATTTTATTTTATTAGGTTTAGGTTTGTTTCTATTTTACCCTTTTGTTTTGTTTTGTGTTGTTTATTTATTTTATCAAATTTAGGTTCTTGGTATTCCATGGGACGTCGATACAGAAGGGCTGAGAGAGTACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTCATGAAGGTTTGCCTTTTTCCATTCTTCTTGTGATACATTCGTACTATCCATTCTTGTCTTGAACCTAGTGTTATTAAAACTGTGATTGCTCACTCAACAGCAATAGTCCTTGGGTTGAAGTCCAAGCCACAAAATAAAAAGGTTTTGTAAATAACATTTTATATACATGAAAATAAATAGTATAATGACTATTAAGATAGTGTAATGTTTTAAGAATTTATATGATGTAGCCTAAGAGAATGACTAAGGAGTGAATTCTCCGAGAATCAAATTACAAAACTTTATTATCAACCAAAGTGTATTCAATTCATGTGAGACCCCTATTCATAAGGGATTAAACACAAATGAGAGTAAAAAGGAACCTAGGGATTTACCAAAATTACCCTAATCCTACCTCCATCATTCTATTCTATCCCTCCCAAAATAAACTCATCCAAGAGTTTTAAAATGATGATATAAACCCGTTCATTGAAGCGTGGCCAGACCAACCGCCTATATCTTGTACTTTTCTTTTCTTTTTTTTTTTTGGTTTTGGTTTTTGTTTTAATCAAAGTAGCTCAACCTAGGTAGAAACAGACATTGCATTGCATGAACAGACTCATCCAATCCAACAAACAAAAAACCAGCCACAGAAGAATCGTTTGGTGAAGAAAACTCACAAAAAAATGTTGGGAAAATTTAATGCGTTTTGGGATGATGGATGGAGTGATTTGGGTATGGGTTGGGTCATAGGCTAGGAATTGGAATTGGCTATGTGGGCTAGGGTTTAAAAACCCAGAATTTCGTTTGAATGGCGTAGATTGCAATGATTGATGCAAATCACATGGGCCGGGTGTTCATACGATACCCAATTTGCTTGGGGATGGGTTTAGGGTCAGGTCGAATTGGTTATGGGGGGCATCGGCAAAAAACCCTTTGCACTCAGAATTATCTCATCTCCTCTATGCAATTTTTTTGTTCTCAATAATCACCCTTGATTTCTTTATGGTATTGGGTTGTGCAAGCTTCGATTTGGAAATAGTCTCATCGACTTCATCATCTTTGCACGTGACGTCGTCTAGGGTTTTGACAATTCTTTAAATTGAGTCGCACATGGTTGCTATCTTCTTCCTCCACTCCAACATCTTCAAATTATCCTTCTTCTACTTCATTCGATTACTTTACTTAAGTTCTTGCTTGCTATTTTAAAACTTCCTCCTATGCTTGCGATTTTGATTTCATGTTGATACTGTTCTCCATTCCTCGATTTGGCTTCGATTTCGTTCGCTTAAATTTCATGTTTGACTTTGTGTGGTTTCTGCAAGATCAAATCTTCATCCCTGCACTTGTTTTCTTTTTTTCCTCACTGAAAAATTTGTGTGGGTAATTTGCCCAAATTCATTCTCTCGAGTGAATTCTTGATTTTGTTGAATTACTTCTGCATCATACAAAAGTCTTCCTTTATTGAATTCTTGCCGTTTTCCTAAAAATTAATCCAAATTTTGAATCATTTCTCCCAAGATATGTTGGATGTTGACCACTTCTTCCATCATCTCCTCCATTGCTTTAGGGTGGATGTAGGAATTGCGTGTTCTTGAATAGGCTTCTACCATTGTTGGTTGTTTTTCATAACCAAGATAATTGTTTTTGTCCCTAAACATATTCGTCGTGTTGTAAAATTCCATTTATTGGACGATTCTTTGAATTTCTTCTACTTTAAAGGGTTTCTCCTTGTAATTAGTCGTGGGTTGTTCGACAACGAGCATAGCTCATGAAGCTTCCTCTTGTGATCTGCGTTACAAAAGTTGTTCGGTCCTGTACTAGTGGTAATCAACATTGGCCCAAGTGATTGCTTTGATACCAAATCGATGTAACCTAAGAATGACTAAGGACCGAACAAGGACTTCATTATCAATCGAAGTGTATTCAATGCTGGAGAGGGGCCCGTATTTATAAGGGAATTAAACACACATTGGGTAAAAAGGATTAACGTAAGGATTTACCAAAACTTCCCTAATCCTACCTCCATCATTAGAGCTTTTTATTAGAGATTGAGGAGAAAAATGAACACTCTTAAGAATACTTTTTAGTTTCTTCATAAAACATTATTAAAAAGAAAAATAGGGCTTCAAGCATCAAAGTGCCCACCCCTAGCCTTGTGGCGTGCCGACTTCAAGCAGGCCTTATTAAGAGCGCCTCACCGTTTTGAAGCCACCTGTCCATTGACCTAAGGTGTCCACTTATAAGAAATTTGCCAAACTATTTCGTTAGACCTTGTTCTCTTGAATTTAAACTCTTTTAGTCGGCTAGTTTTTATTTTGGTGGCTCCTCTTGTTGGGCTATGGTTTTCGATGCCTCACTTCTATGTGTGTGTGTGTGTTAATGTTTACTCAATGAAAGTTGCTCTCTTGATGAGATATAATTTTTATCAGCTTTGTTTTCCTTGTGGATTCTACACATGAAGCTAGTGAATGCTTGTTGTGACTAATTTTGTATCATTACAACTTTTTATTTCCAAGTCCTTTTATCTTTATATAGCCATATGGTTTTTTTTTTAAATGTCAGGAGAGGTCAACTGGTCGATCTCGTGGTTTTGGATATGTGACATTTGCAACTGACGAAGATGCTAAGGTAGGAACATGTTCAACATTTTTCTTTTGGTTGACTTGATGTTTTTTGATGCCTAACATCTCTTTGTTGCAGAATGCACTATCAAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTTAAAGTTGCCACACCTAAGGTTAGTCTCTCTCTCTCTCCAGTCTCCCCTCTACTTATTTGCACTCCCTTCACACATTTTCCTTCTGCAGAGTGGTCTTCGTTGTATTCTTGTTTGTTTTTTTTTTTTCTTAAAAAAAATAAATCATAAGAAGTGCGAGTGCTTTGTTTGATGTGTATGTATACAACTGAATTGGATGTGGACTTCATATTTTCTGTTGACAGGAGGAGATGAGAGCACCTCCAAAGAGAGTCACCAGGATTTTTGTAGCAAGGATCTCACAATCTGTTACTGAGGCTGCCTTCCGCAGGTAGTTTGGTGTGATTTTCTGCTATTTCTTCTTCTTCTTCTTCTTTTATATTTGACCTTTTGAAAATGAAAGTTGATGTACTTATTTAGAAAAATGGATGTTATCAGTATCAGTTTATTTGAATTTTGAAAGTTGAAACATTTGTTTTGAATTGAAATGTAACCCCTGGAAATGATCTTGTTAGCTGTAAACGTTAAATCAACTAACTTGTTCATTTCTGGAACTGAAATGGAAGAATCTCATAGATTAGGGATGAATGGTTAATTTAAGGAGGATAAAGAATAAAAATTCTGGCCCTTTCTTAAGCATGTTTCCTTCATTTTTTCGTCATTCCATACTTGGTCTATGACACACAGACATTTTAGCTAGGGTAATGTCATTCTAACCATTGTGTGTTGAATGTTCCAACATTCAGTGTTTATAAAAAAAAAATAGTGATATTGGACAAAATAATATTTTTTGGGAGTAAAATCCATCAAATTTTTAACAAAGCATATGGATACATAGGCTTACTGACTTCAGATTTCCTTAGGTATAAAAATTATATATATTTAGAACAATTTATATTCTAATTAGTGTGTTCTTCATATTGTGTCCGTGTCCTAGTCCCTTTTTTTAGAAGAGACACATTTCATTGTGATTGAAATAAATGGACCAAAAGCTCCATACACCTATTGGTGGATTGCATGAAGGCTTTCCAATTGGAAAGCAGATAAGAAAGGCTAGAATTAGAGAAAGGAGGATAACGTTTACATCAATATGAATCATGAAAAAGGACCAAATCCATAAGCCTATTAAAGGAATTAAAGGAATCTCTAAAAAGTCTTCCATTCCAATCCTCCCAAAGAAACCCACGAAAGACTCTGTTGAGAGCAAGCCAAATAATCTTCTTCTTGCCATGGAAAGGGTGGCAATCAAAAGTGGAGGCAAGGAAATCATAGGTGCAATCGGGTAAAGCCAAGGACCAACCAAAAGCTTCCTCTAGGATGATGGCCCAATAAGTGGAAGCAAAAGAGCAATGCAGAAAAGGTGACTTGGATATTAAGAGTGTGCACACATAGTGTATCATGAAGGGGAGATGTTCATATAAGGCACATGGTGCTGAAGTTGATCAGCCATAGTGATAGCTCCAAAAATGAGTTCCCAAAGAACAATTTTAATCTTCTTTTAGATATGAATTTGACCAAATCACCATGTAAAGACTACTCGAAATAGGACAGGGGAACCCACCAAATCTTCCACGAGGGATTTGATTGTAAAAATGTTGGATGGGTCAAGGGGTCAAGACCAAGAGTCATTGCGATTCCTTAAGGTAACTGAGGAACAAATTATTATAATTATAATATTGACCTTTAATTAACCTTTTCCATTCACATAGGATGATAGGAATAGGAAGTTTTACATAATTTCACAAAATTATCGCCCCCAGGGGGTGACCCCGTTGGGAAGAGCTTGGGGTCGTTTGGTCATACTGGCTTAGAGGTTCTAAGTTTGAACATTCAAGTGAACTTAATACCAAAAACCCTTGATGTCTCCCGCGTCTGGACCTTGGGGTGGGTGCCCTAGGTATAGGGGTCAAAGCTCTGACTCCCATCTTTATAGATGTACAATTCCATAAAATTAATTATCTTTTACTAACATGGGAAGAAAACCACGTTCCTGTTTTTTTGGTTGGTATCTCTTAAAAATTCATTAACTCAATCCACGAGGACCTTGTGACTTTCTGAAAAAGCCATCATCTTGATGGGATTTTGGAGAGAGGAGTTGTAGTATCCTTGGGATGGCAGCAGGCCATGTAGAATCAACTAAGACCTTATTCAAGCATTTTGTAGCAGAGTTGCAATGTTTGTCTTAAGAAATCGGTTACCTGTCTTCAGACAACCCTTTTTTTAGTTTAGTTTTTAATTCAGGATGAAAATAAATTTTATGGTTTTCTAATGTTTTCTTGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGTACGGTTTCCTTTTCACTAAAGTGGGAATTGGGAAATATTCATTTTATTTTGATTTGATGAGCACATATGGTTCACCCATGCTTATGTGCAATCTACAATGTATTACTGACGTGATTTAACGTTTACTTGATTAATTATTCAGGACCAGGGATCAAAAACCCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGGTTGGATTATGTTTCTATATTGTTCAAGTTGCCAATTTTAGTGTCTCATCACTCACCTGGTAAGACAAGATAACCTCCTTGAAGTGTCTTGTCTTGCTTCTTGAATTTAAAGTATTAAAAAAAAACCAAAAAAATCACATAAGGTAGCAGTACTCATGCTGCCTTGCCTCTTTCCTTAGCCTCCCCCCCCACCCCCCACCCATTCCATTATGGGTCCCCAAACAGCCTTTTGGAGGTTGGAATGTAATCAAGATTACTGGAAATCCGAGGAGTGTTGGAATGCGTGAGGTATCAACTGCAGAACGAAAATGGAATCGTGAAATGTGAAAACGGTGGGAAATAGGGTTTGATTAAAAATTGCCGGAACAGAATGAGTTTAATATTACAAATCAAGCCCAAACACTCAATCCAAACATGGGTTTTTTATTACATTACAACCCAAATCCATCCCATTGCGTGCTCCAAACAACCCCTTAGTGTCTGACAGGTGGTAGAAACTTGTTAGCTTAATACACGTATTAGACATTAGTTGTATTTGGTACAATTTGACTAGGAGTTGGGGGTGGCATGCATTGAACATTTGTAATCATAATAAATAGACAAATAGTAACATGTCTTAGGGTGAAATTGCATAATAAATTCATAATCTAAATCTTAACAACTTTAAATTTCTCTCATATAAAAATGATATATATACTTTTAAAACTGTAAATTGCAATAAATGTATTATTAGATTTTTAAAATAAAATGTAACATCATGTTTGTTTCTATCCTTGGACACATCATCTTTTAGGCTGGATTTTTCTTCTTTCTTCTTTTCTTTTACTTTTTTTGGGGGAATTTCTATGGAACATTTAGTTAGAGAGTATAAGCAGCTGATTTTGCCTTATTGTTTTTATCATTCTTTTTTGGTTGTACATATTCTTCTTTTATTTTGGTGCAATCGCTCTCTCTCGTTTGGGCTTCTTCTGTAATTTTTGACGTCTCTCCATATTGTACTCTACTCATTGAATTATTTCTTTCATCAATGAAATGTTTCTTATCCCAAAAAAAAAAAAAATAATAAATAATTTATTTGTGATTTGTCATTGGTTCGTTGGTAAAACTGTTGCTCATATTGTTTGTGTTGGACTCCTAGTTAGGATTATATTGGGATAATTAGTAGTAAGGGGCATTCTAGTAATTAGCCATTAAGTTTGTTAGGCTTTTTGATTATAAATAGTAAGAAAGAGTATGGCTAGGGGTGTGAAGAATTTTGGTAGTGATTTCCTAATTGGGAAATAGTGGGAGAGAGTAGCCCTCTCGAAAGGCTATGGTTTATTGTAGTTTCTTCATTGATATTGCAATATAATTCGATCTTTTATTGTTCTTTGGTGTTCTTGAGTTCTCTTGTTAGGAGGTATCCTAACAAATTGGTATCAGAGCCGTTCATTCTGGAACATCAATTTTAGAAATGAATCGTGATCGGTTGAATGAAACACTGTTAGAGATAGAGAGAGACGTGAAAGCTTTGCAAAAAAAGCTCCTTGAATCTCTGCAAAGAGAGAGAAAAAGAGGAGAGAAGACAAACAGCAAAGAAAGAGGAATCAGAAAAGCAAGAAACGATTGCAGTGGGTGTGGTATCTGAAACTTCCAATCAGATTACAATTGAAAACTCACCTTGGGAAGGATTTTCACAATCATTGCAAGGCATCAAGGAAGGGGGAAGGTGTCAAGCTATCTTGAGGAGAAATCGCCACTGAAGATAGTATGGAGGGAAGGTGATTTCAATGAAAACTGTAAGAACGGCGAGGAGATAAAATTTATAGAAACAAAAGAAAAGAAGAGAGGTGATGAGGGACTTCACAGTAGAGGAGGAGAGAAAAAGAACACTGAATCGGAGATGGAGAAATCGAAGAAGAAGAGAAACCTGATTGCCCCTGCTCATCGTCAACAGCGAAGGGTGAGATGGTCGGAGACAAGGACTCGGTGGAAGTGGAAATGCCAATCAAATGGAGCAGAAGCAACAAAGAGGCGGAGTGATGAGCGAGGGAAAAATAATCGAACGAAGAACGAAAGAGTTGGAGAAAAAGGGAAGGTAAGAAAGAGAAAAATACTTATTGAAAAAGGTGGTGACGGACGGATGACAACTCGACGGAAGAAGAAGAGGAATGTGTTGAAAGTCATCGGCAGTCGGATGGAGAAAATATTGCTTCTCAAAATTGCAGATAACGGTTGGCCGCGATGGAGAAAGAAGACGCCGACGGTTCATTGGTTGGGATGGCAATGAACCCAACGAATGGAGAAACGATGGCGGACGGAAACATTGACAGGCGAAGAGGGTGGGATGACCAGGAGGTTGGACGGGAGAAAAATGGTGGAGGGAGATGCACAACAATGGACGGAGAAGAAGACTTGTAACCGGGGAGACCGTTGGCCGGAAGAGGAGGTGGAGATGTTGTTGGGCGGCGGTGGAAGAGCATATGCCCGAATGGAGGTCGTCGGAATGTGGGTGGTGGTGAAGACGCAAGCAAATTGGGCAATCTTCACGAAGGATATGCCGAAATTTGTAGAGGGAGTCAGAGTGGGCCTACAATGGACGGAGAAGATGAATTGGGAAGGAGGAAATTTTCGTGAAGAGGAGGGGAAACAAGTTGCTACCCACGTGAAGTGTCAGAAGGTGGGGCTAGGAAGTACAAGAAATGGCAATAATAATTTTGGGTTAATTATTGGGCTGGTTTTGCATAAAAAGGCCCCGATTTTCTCAAATAGGTTTAGTTTGTATGGAGACGTTGGGGCCCAAATGGTGCGTGAGGGTTGGGTTTGCATTAAATGGCTGGAAAAACAAATTCAAGATTGGAAGATGCTAAAAACGTGGGAAGTCAGCCAAGTGAAAATTCATGAAGGAAGAACAGAAGAGCTTACTGGGCTTGAATTTCATAAATTCATTGAGGCCCAGTTGATAGAGGGGCAGAAAAGGGGCTTGAGTATGGGATGGAATGGCATGAAGCTCATGGGTATTTTTAAGAAAGATGGTGTATGGGCCCAAAAACTGAGCTGGGGCTTGGAGGAAAAAGTTGATTATGAAGAAGCCCATTTCATTTTGCGCAAGTCGACTAGGGATTTTTCACATCTTTTCCCTGTTGTTCAAGTGGAGCAATGGGCCCAACACGTGCAAAAAGCTGGTAAGAAGGAAAGTGGAAAGTGGGCCCATTATGTTATTTCACTAATAAATGGAAAGGGGGTACTAATAAAAAGTGAGCTGGTGAGCGATTTTGGACCGCTAGTTGATTGTGGGCCTAGGCCTTTAGAGAAGAGGAACTTCAATTTTAAACTCATAGGCAAATGGCGTGCAGATGGGCCTAGTCACGTGCCTGATGAGAAGAAAGATGATTCTGGGAGATTTTGTGTTTTTGGGCTGCGTTATGGGCTGAAGCTGAGGGAATTAATTGGAGCCCAAGTGTTTTCCAGAGCTGAAGAGAAGGTATATCTGTCTGAGGATGAAGAGGGGGCGGGTGATCTGGGTAATTTTGATCTTGGGTATAAGGATTGTAATGGATTATCCAACCCACACCTTGAGGACAAGGTGTGTTTTCAATGGGCAGGTAATGTAAGGGACCTAGTTAGAGATATATAGGGTTATTTTATTGTGGTATTCAAATTCCAGCAAGATATGAGAATGGCAGTGGAAGGGTTAAGCGGGCAAACCAAAACGACTAGTGATCGGACAATGAGTGTCGGATGGAGGAAGGCGGCGAAGAAACAAACACAGCTGAAAGCGACCATGGGCGGCGAAGAAACAAACACAGTTGAAAGCGACCATCAAAGGGGGATTCGTACGAAAACAGAAAAAAAGAATGCAGAGGAAGATGGTGGGGTGGATGATGGATGGAGACAAAGGCTTGGAGAAGAGGCTACAGTCGGTGGGAACATAAGTCCCATGTGATGTGTCAGGGGGTGGGGTCATTACGTTGGAAAAAGCTACAGAAGCCTATGGGTTTGATTTATAGGCTCTTAAGAGGGCTTTATCCAAATGAATTAAAGCCCAAATTTTTTGTTCTTTCGAGGCTGAAGTGAAAACAGGGGTTTGAAGTCTAATCTTAGTTAAAAAAAAAAAAATCAGTCTTTTTGTTGTTCACACCTTGAGGACAAGGTGTCTTCAAAGGGCGGAGTATTGTAAGACTCCTAGTTAGGATTATATTGGGATAATTAGTAGTAAGGGGCATTCTAGTAATTAGCCATTAAGTTTGTTAGGCTTTTTGATTATAAATAGTAGGAAAGAGTATGGCTAGGGGTGTGAAGAATTTTGGTAGTGATTTCCTAATTGGGAAATAGTGGGAGAGAGTAGCCCTCTCGAAAGGCTATGGTTAGTTTTTCATTGATATTGCAATATAATTCTATTTTTTATTGTTCTTTGTTTGTTCTTTGGTGTTCTTGAGTTCTTAGGAGGTATCCTAACAGTTTGTCAGCGGGTAGCTTCTCTAAATAGTTCATTTGTGAGTCTTTGTGACTAAATATTGTTGTAATTATCCTCCTTTGACGACACTATTTCTTGGATCCGTTTCTTGAAGTTGTAATTTTTGTTTTTGATCTTTATATGATCTCCTGTGGTTGTACTTTCATCATGCTTCATGAGGAAAGCTCTATTGGTTTTCCCCCCTCCTTAGTGTACCTTGTGCTTTATATTGCCTCTCTTTCCTTCTAATTTTGTTTTCTTGACAATCTGCATTATATTATTTTCACATTGACAAAAAAATTCCTTTTCATGGTTGCCTATGGTTTCAAATTCAAGGCACTGAATGTGGTAACTCTTATCTTGCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGGGGTTCTACTGTGGTTGTTGATAGAGCGACCCCCAAGGCAAGATTTTTGCATTTGACTATTTAACACCATATTTACCTTCCGGATATTTTTCAGTCAGTATTAAATTTGTACATCTAATTAAAGGTTACTATATTATATTTCCAGGATGATGATTTCAGGCCCATTGGGAAAATGCCGCAGGGTCAGGGTGGTGGTGGGGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCTGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCAGGCTCAGTTTATGGGAGTATGTATCTCTGACAGTTTCCTTGTTCATGTGATGCTTGGTCTTGGTAAACATTGTTATGATGATTTACCTTGTCATTGGATCAGGAAGGGAACTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTCGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGTCAGTACTTTGGTAGATTTGGCCGTATATTGGATGTCTATGTTCCGAAGGTAAAAACTAGATTTAGTAAATGCTGATTTTGCCACTCTGGCTGATTTGATATAAGCCTAAAGATCCAGTTGTTACTGATTAATGTAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCACGAGATTTGTGGACAACAGGTATGTGTCTGCATGTCACTTTGCTTACTAGAAGGAAGCATAATTGCCTGTTTGGACGTCGCTGGAATGTTTAGAATAGAGTTTCTTTTGTAACCTAATTGATATATACATGCTTGTAGACATGGGCATGAAACACTATATATATATATATATATATATATATATATCTAAAGTATGCAATTATATAGGCATTTTCAGTTCGAACTTTTTGGGTGTGGATCCCTCTCTGTAATTTTCTTTTTGTTCCTCTATTTGGCTCTCTCTGTGGTGGGTTGGTCGATTCTTTTTACTTCAATCAAGAATCTCACCGTTGGATTCTGCAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCAGCTGGAGCAAGTGGAAGTTTTATGATGAATAGCGCTGCAGAATCTTTCGGCGGCTATGTTGGACCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATGTAAGTGCTTCTGTTTTGCTTCCTATTTGATTTATTTTAAGTTGGCTTGAATTTAGGTGGTGATTGGTAGGTTGTCCACGACATAAAGTGAGCTATACATTTACTGCTAAATCCATATTCATTAGTTTAGAACTGAAAATTGAAATTACGCAGATGAAAATTTCATGTGTATACAAGTTTTTTCTTTTTTTTTTTTTCTTTTCCCCTCAAAATATAAAATACTTGCACCCTGTAGATAGTATTTGGTACAATATCAATAGTTTACGTTAATTCATTGGGTCAGGCATTTTACTATGTATCATGAAATGGAGTACTCTGTATATAGAATCTTTAAAAGAAACTCCAATAATAATGATCTTCAATCTTTAGTGGGCATTGATATCATGACAGTGTTTGAGGGCGCTCCTAGAACAAGTGTATGTTAGAAAGAATACTTAAGAATTCATTTTAAGGTTTGATTCTAGATTTCTGAAAGTTACTCTTGAGTGCTTTCGGTTAAAATACAAGTACTTCCTCGCAAAAGCACTGAAAAAGTGCTTTGAAGTGTAGAGCGTTTTTAATGTTACTTCGGAACATGATTTTGTTATTCTTGTTCTCTCTTTTTAACACAAGATAATTATTATTATTATTATTATTATTATTATTATTTTTTTTTTTAATTTTATTTTTAGAGATTAGTTTGTTTTTCTTATGCAGTGGGGTTATGGTATTGGTGGTGGAAGACCATCTAGAGCAGACTGGAGGTATCGGCCATACTAA

mRNA sequence

ATGAATTCGGTGAGATTGATTTGGTATTTGACTATCGTGTGTGAGAAAGAGGTGTGCCTCTTCTTGTTATCATGTGCAGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGTGGGTCTTTGAGCGAGCGAGCGAGCGAGGAAGAAGAGGAGGAGAGAGAGATATACTTTTTCACTTTTAGGGTTCTTGGTATTCCATGGGACGTCGATACAGAAGGGCTGAGAGAGTACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTCATGAAGGAGAGGTCAACTGGTCGATCTCGTGGTTTTGGATATGTGACATTTGCAACTGACGAAGATGCTAAGAATGCACTATCAAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTTAAAGTTGCCACACCTAAGGAGGAGATGAGAGCACCTCCAAAGAGAGTCACCAGGATTTTTGTAGCAAGGATCTCACAATCTGTTACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGACCAGGGATCAAAAACCCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGGGGTTCTACTGTGGATGATGATTTCAGGCCCATTGGGAAAATGCCGCAGGGTCAGGGTGGTGGTGGGGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCTGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCAGGCTCAGTTTATGGGAGAAGGGAACTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTCGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGTCAGTACTTTGGTAGATTTGGCCGTATATTGGATGTCTATGTTCCGAAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCACGAGATTTGTGGACAACAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCAGCTGGAGCAAGTGGAAGTTTTATGATGAATAGCGCTGCAGAATCTTTCGGCGGCTATGTTGGACCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATTGGGGTTATGGTATTGGTGGTGGAAGACCATCTAGAGCAGACTGGAGGTATCGGCCATACTAA

Coding sequence (CDS)

ATGAATTCGGTGAGATTGATTTGGTATTTGACTATCGTGTGTGAGAAAGAGGTGTGCCTCTTCTTGTTATCATGTGCAGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGTGGGTCTTTGAGCGAGCGAGCGAGCGAGGAAGAAGAGGAGGAGAGAGAGATATACTTTTTCACTTTTAGGGTTCTTGGTATTCCATGGGACGTCGATACAGAAGGGCTGAGAGAGTACATGAGCAAATTTGGGGAGTTGGAGGATTGTATTGTCATGAAGGAGAGGTCAACTGGTCGATCTCGTGGTTTTGGATATGTGACATTTGCAACTGACGAAGATGCTAAGAATGCACTATCAAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTTAAAGTTGCCACACCTAAGGAGGAGATGAGAGCACCTCCAAAGAGAGTCACCAGGATTTTTGTAGCAAGGATCTCACAATCTGTTACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCAAAGGACCAGGGATCAAAAACCCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGATACTCATGAATTAGGGGGTTCTACTGTGGATGATGATTTCAGGCCCATTGGGAAAATGCCGCAGGGTCAGGGTGGTGGTGGGGGTGGGGGTGGATATGGTGCATACAATGCTTATATTTCTGCTGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCAGGCTCAGTTTATGGGAGAAGGGAACTTCGAGGGATGGGAAAAAAGATTTTTGTTGGTCGGCTCCCACAAGAAGCATCTGCTGATGATCTCCGTCAGTACTTTGGTAGATTTGGCCGTATATTGGATGTCTATGTTCCGAAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTAGCAGATCGTGTATCTCGAAGATCTCACGAGATTTGTGGACAACAGGTTGCTATTGATTCAGCCACTCCTCTTGATGATGCTGGAGCTGGAGCAGCTGGAGCAAGTGGAAGTTTTATGATGAATAGCGCTGCAGAATCTTTCGGCGGCTATGTTGGACCTATGAGGACTTATGGAAGGATGTATGGAAGCCTGGACTTCGATGATTGGGGTTATGGTATTGGTGGTGGAAGACCATCTAGAGCAGACTGGAGGTATCGGCCATACTAA

Protein sequence

MNSVRLIWYLTIVCEKEVCLFLLSCAGSECERFGESERGSLSERASEEEEEEREIYFFTFRVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVDDDFRPIGKMPQGQGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY

Homology

[Close]

BLAST of HG10000664 vs. NCBI nr
Match: XP_022932294.1 (heterogeneous nuclear ribonucleoprotein D0-like [Cucurbita moschata])

HSP 1 Score: 700.7 bits (1807), Expect = 7.8e-198
Identity = 361/405 (89.14%), Postives = 366/405 (90.37%), Query Frame = 0


Query: 42  SERASEEEEEEREIY------FFTFR----------VLGIPWDVDTEGLREYMSKFGELE 101
           SERASEEEEEER+I       F  F           VLGIPWDVDTE LREYMSKFGELE
Sbjct: 69  SERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELE 128

Query: 102 DCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRV 161
           DCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVK+ATPKEEMRAPPKRV
Sbjct: 129 DCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRV 188

Query: 162 TRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMA 221
           TRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSK HRGIGFITFASSDSVE+LMA
Sbjct: 189 TRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKIHRGIGFITFASSDSVESLMA 248

Query: 222 DTHELGGSTV--------DDDFRPIGKMPQ---GQGGGGGGGGYGAYNAYISAATRYAAL 281
           +THELGGSTV        DDDFRPIGKMPQ   G GGGGGGGGYGAY+AYISAATRYAAL
Sbjct: 249 ETHELGGSTVVVDRATPKDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAAL 308

Query: 282 GAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKR 341
           GAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKR
Sbjct: 309 GAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKR 368

Query: 342 SGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDD-AGAGAAGASGSFMMNSA 401
           SGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDD AGAGAAGASGSFMMNSA
Sbjct: 369 SGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDEAGAGAAGASGSFMMNSA 428

Query: 402 AESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 419
           AESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR DWRYRPY
Sbjct: 429 AESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGDWRYRPY 473

[Close]

BLAST of HG10000664 vs. NCBI nr
Match: XP_038877270.1 (RNA-binding protein Musashi homolog 1 [Benincasa hispida] >XP_038877271.1 RNA-binding protein Musashi homolog 1 [Benincasa hispida])

HSP 1 Score: 699.5 bits (1804), Expect = 1.7e-197
Identity = 350/367 (95.37%), Postives = 353/367 (96.19%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWDVDTEGLR+YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 7   VLGIPWDVDTEGLRDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 67  LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGG 241
           GSKTHRGIGFITFASSDSVENLMADTHELGGSTV        DDDFRPIGKMPQ    GG
Sbjct: 127 GSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ----GG 186

Query: 242 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDL 301
           GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE+RGMGKKIFVGRLPQEASADDL
Sbjct: 187 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREIRGMGKKIFVGRLPQEASADDL 246

Query: 302 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 361
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 247 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 306

Query: 362 LDD--AGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 419
           LDD  AGAGAAGASG+FMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA
Sbjct: 307 LDDAGAGAGAAGASGTFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 366

[Close]

BLAST of HG10000664 vs. NCBI nr
Match: XP_011649346.1 (RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >XP_031737421.1 RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >KGN62007.1 hypothetical protein Csa_006754 [Cucumis sativus])

HSP 1 Score: 698.4 bits (1801), Expect = 3.9e-197
Identity = 349/367 (95.10%), Postives = 353/367 (96.19%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 7   VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 67  LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQ 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGG 241
           GSKTHRGIGFITFASSDSVENLMADTHELGGS V        DDDFRPIGKMP  QGGGG
Sbjct: 127 GSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMP--QGGGG 186

Query: 242 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDL 301
           GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEASADDL
Sbjct: 187 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDL 246

Query: 302 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 361
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 247 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 306

Query: 362 LDD--AGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 419
           LDD  AGAGA+GASG+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA
Sbjct: 307 LDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 366

[Close]

BLAST of HG10000664 vs. NCBI nr
Match: XP_008457826.1 (PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo] >XP_008457827.1 PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo])

HSP 1 Score: 696.4 bits (1796), Expect = 1.5e-196
Identity = 348/367 (94.82%), Postives = 352/367 (95.91%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 7   VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 67  LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQ 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGG 241
           GSKTHRGIGFITFASSDSVENLMADTHELGGSTV        DDDFRPIGKMPQ    GG
Sbjct: 127 GSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ----GG 186

Query: 242 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDL 301
           GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEASADDL
Sbjct: 187 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDL 246

Query: 302 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 361
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 247 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 306

Query: 362 LDD--AGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 419
           LDD  AGAGA+GASG+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA
Sbjct: 307 LDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 366

[Close]

BLAST of HG10000664 vs. NCBI nr
Match: KAG6571306.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 693.3 bits (1788), Expect = 1.2e-195
Identity = 347/367 (94.55%), Postives = 350/367 (95.37%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWDVDTE LREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 59  VLGIPWDVDTEALREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 118

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVK+ATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 119 LGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 178

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQ-GQGGG 241
           GSK HRGIGFITFASSDSVE+LMA+THELGGSTV        DDDFRPIGKMPQ G GGG
Sbjct: 179 GSKIHRGIGFITFASSDSVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQGGGGGG 238

Query: 242 GGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADD 301
           GGGGGYGAYNAYISAATRYAALGAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEASADD
Sbjct: 239 GGGGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADD 298

Query: 302 LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT 361
           LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT
Sbjct: 299 LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT 358

Query: 362 PLDD-AGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 419
           PLDD AGAGAAGASGSFMMNSAAESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR 
Sbjct: 359 PLDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRG 418

[Close]

BLAST of HG10000664 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.8e-25
Identity = 67/199 (33.67%), Postives = 105/199 (52.76%), Query Frame = 0


Query: 64  GIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLG 123
           GI W+ D + LRE+ + +GE+   IVM+++ TGR RGFG+V F+        L  +H + 
Sbjct: 12  GISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQEKHSID 71

Query: 124 NRMMEVKVATPKEEMRAPPK----------------RVTRIFVARISQSVTEAAFRSHFE 183
            R ++VK A  +EE +   +                +  +IFV  +  ++T+  FR +FE
Sbjct: 72  TREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFE 131

Query: 184 KYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT-HELGGSTVD-DDFRPIGKM 243
            YG +TD+ +  DQ +   RG GF++F S D+V++++  T H+L G  V+     P    
Sbjct: 132 VYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKDAN 191

Query: 244 PQGQGGGGGGGGYGAYNAY 245
           P G G   GGGG G Y  Y
Sbjct: 192 PGGGGRSMGGGGSGGYQGY 210

[Close]

BLAST of HG10000664 vs. ExPASy Swiss-Prot
Match: O43347 (RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-24
Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 64  GIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS-SEHFL 123
           G+ W    EGLREY  +FGE+++C+VM++  T RSRGFG+VTF         L+ S H L
Sbjct: 26  GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85

Query: 124 GNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQSVTEAAFRSHFEKYGEITDLYMPK 183
            ++ ++ KVA P+   RA PK VTR   IFV  +S + T    + +FE++G++ D  +  
Sbjct: 86  DSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMF 145

Query: 184 DQGSKTHRGIGFITFASSDSVENLM-ADTHELGGSTVD 217
           D+ +  HRG GF+TF S D VE +     HE+    V+
Sbjct: 146 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180

[Close]

BLAST of HG10000664 vs. ExPASy Swiss-Prot
Match: Q61474 (RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-24
Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 64  GIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS-SEHFL 123
           G+ W    EGLREY  +FGE+++C+VM++  T RSRGFG+VTF         L+ S H L
Sbjct: 26  GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85

Query: 124 GNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQSVTEAAFRSHFEKYGEITDLYMPK 183
            ++ ++ KVA P+   RA PK VTR   IFV  +S + T    + +FE++G++ D  +  
Sbjct: 86  DSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMF 145

Query: 184 DQGSKTHRGIGFITFASSDSVENLM-ADTHELGGSTVD 217
           D+ +  HRG GF+TF S D VE +     HE+    V+
Sbjct: 146 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180

[Close]

BLAST of HG10000664 vs. ExPASy Swiss-Prot
Match: Q8K3P4 (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus OX=10116 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-24
Identity = 63/158 (39.87%), Postives = 93/158 (58.86%), Query Frame = 0


Query: 64  GIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS-SEHFL 123
           G+ W    EGLREY  +FGE+++C+VM++  T RSRGFG+VTF         L+ S H L
Sbjct: 26  GLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85

Query: 124 GNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQSVTEAAFRSHFEKYGEITDLYMPK 183
            ++ ++ KVA P+   RA PK VTR   IFV  +S + T    + +FE++G++ D  +  
Sbjct: 86  DSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMF 145

Query: 184 DQGSKTHRGIGFITFASSDSVENLM-ADTHELGGSTVD 217
           D+ +  HRG GF+TF S D VE +     HE+    V+
Sbjct: 146 DKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVE 180

[Close]

BLAST of HG10000664 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.9e-23
Identity = 49/145 (33.79%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 64  GIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLG 123
           G+ W+   + LR+Y  +FGE+ DC VM++ +TGRSRGFG++TF   +     +S EH L 
Sbjct: 169 GLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLD 228

Query: 124 NRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGS 183
            ++++ K A P+EE     ++  ++FV  +    TE  FR+ F ++G + D  +  D+ +
Sbjct: 229 GKIIDPKRAIPREEQ----EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDT 288

Query: 184 KTHRGIGFITFASSDSVENLMADTH 209
              RG GF+T+ +  +VE  M+  +
Sbjct: 289 GRPRGFGFVTYENESAVEATMSQPY 309

[Close]

BLAST of HG10000664 vs. ExPASy TrEMBL
Match: A0A6J1EWL0 (heterogeneous nuclear ribonucleoprotein D0-like OS=Cucurbita moschata OX=3662 GN=LOC111438656 PE=4 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 3.8e-198
Identity = 361/405 (89.14%), Postives = 366/405 (90.37%), Query Frame = 0


Query: 42  SERASEEEEEEREIY------FFTFR----------VLGIPWDVDTEGLREYMSKFGELE 101
           SERASEEEEEER+I       F  F           VLGIPWDVDTE LREYMSKFGELE
Sbjct: 69  SERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELE 128

Query: 102 DCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRV 161
           DCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVK+ATPKEEMRAPPKRV
Sbjct: 129 DCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRV 188

Query: 162 TRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMA 221
           TRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSK HRGIGFITFASSDSVE+LMA
Sbjct: 189 TRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKIHRGIGFITFASSDSVESLMA 248

Query: 222 DTHELGGSTV--------DDDFRPIGKMPQ---GQGGGGGGGGYGAYNAYISAATRYAAL 281
           +THELGGSTV        DDDFRPIGKMPQ   G GGGGGGGGYGAY+AYISAATRYAAL
Sbjct: 249 ETHELGGSTVVVDRATPKDDDFRPIGKMPQGGGGGGGGGGGGGYGAYSAYISAATRYAAL 308

Query: 282 GAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKR 341
           GAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKR
Sbjct: 309 GAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDLRQYFGRFGRILDVYVPKDPKR 368

Query: 342 SGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDD-AGAGAAGASGSFMMNSA 401
           SGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDD AGAGAAGASGSFMMNSA
Sbjct: 369 SGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDEAGAGAAGASGSFMMNSA 428

Query: 402 AESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRADWRYRPY 419
           AESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR DWRYRPY
Sbjct: 429 AESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGDWRYRPY 473

[Close]

BLAST of HG10000664 vs. ExPASy TrEMBL
Match: A0A0A0LMN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285910 PE=4 SV=1)

HSP 1 Score: 698.4 bits (1801), Expect = 1.9e-197
Identity = 349/367 (95.10%), Postives = 353/367 (96.19%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 7   VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 67  LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQ 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGG 241
           GSKTHRGIGFITFASSDSVENLMADTHELGGS V        DDDFRPIGKMP  QGGGG
Sbjct: 127 GSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMP--QGGGG 186

Query: 242 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDL 301
           GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEASADDL
Sbjct: 187 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDL 246

Query: 302 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 361
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 247 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 306

Query: 362 LDD--AGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 419
           LDD  AGAGA+GASG+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA
Sbjct: 307 LDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 366

[Close]

BLAST of HG10000664 vs. ExPASy TrEMBL
Match: A0A1S3C728 (RNA-binding protein Musashi homolog 1 OS=Cucumis melo OX=3656 GN=LOC103497417 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 7.1e-197
Identity = 348/367 (94.82%), Postives = 352/367 (95.91%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 7   VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 67  LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMPKDQ 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGG 241
           GSKTHRGIGFITFASSDSVENLMADTHELGGSTV        DDDFRPIGKMPQ    GG
Sbjct: 127 GSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQ----GG 186

Query: 242 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDL 301
           GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEASADDL
Sbjct: 187 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDL 246

Query: 302 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 361
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 247 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 306

Query: 362 LDD--AGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 419
           LDD  AGAGA+GASG+FMMNSAA+SFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA
Sbjct: 307 LDDAGAGAGASGASGTFMMNSAADSFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 366

[Close]

BLAST of HG10000664 vs. ExPASy TrEMBL
Match: A0A6J1I7Z8 (heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471691 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.7e-195
Identity = 344/366 (93.99%), Postives = 349/366 (95.36%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWD+DTE LREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 7   VLGIPWDIDTEALREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVK+ATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 67  LGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGG 241
           GSK HRGIGFITFASS+SVE+LMA+THELGGSTV        DDDFRPIGKMPQG GGGG
Sbjct: 127 GSKIHRGIGFITFASSESVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQG-GGGG 186

Query: 242 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDL 301
           GGGGYGAYNAYISAATRYAALGAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEASADDL
Sbjct: 187 GGGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASADDL 246

Query: 302 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 361
           RQYFGRFGRILDVYVPKDPKRS HRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 247 RQYFGRFGRILDVYVPKDPKRSSHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 306

Query: 362 LDD-AGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGIGGGRPSRAD 419
           LDD AGAGAAGASGSFMMNSAAESFGGY GPMRTYGRMYGSLDFDDWGYGIGGGRPSR D
Sbjct: 307 LDDEAGAGAAGASGSFMMNSAAESFGGYAGPMRTYGRMYGSLDFDDWGYGIGGGRPSRGD 366

[Close]

BLAST of HG10000664 vs. ExPASy TrEMBL
Match: A0A6J1D811 (RNA-binding protein Musashi homolog 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017885 PE=4 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.3e-190
Identity = 341/367 (92.92%), Postives = 346/367 (94.28%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWD+DTEGL++YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF
Sbjct: 7   VLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ
Sbjct: 67  LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDFRPIGKMPQGQGGGG 241
           GSK HRGIGFITFASSDSVENLMA+THELGGSTV        DDDFRPIGKM Q    G 
Sbjct: 127 GSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVDRATPKDDDFRPIGKMAQ----GS 186

Query: 242 GGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASADDL 301
            GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEAS+DDL
Sbjct: 187 SGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDL 246

Query: 302 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 361
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 247 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 306

Query: 362 LDDAGA-GAAGASGSFMMNSAAESFGGY-VGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 419
           LDDAGA   AGASGSFMMNSAAESFGGY  GPMRTYGRMYGSLDFDDWGYGIGGGRPSRA
Sbjct: 307 LDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDDWGYGIGGGRPSRA 366

[Close]

BLAST of HG10000664 vs. TAIR 10
Match: AT4G36960.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 531.6 bits (1368), Expect = 5.8e-151
Identity = 270/375 (72.00%), Postives = 308/375 (82.13%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWD+D++GL++YMSKFG+LEDCIVMK+RSTGRSRGFGYVTFA+ EDAKNAL  EHF
Sbjct: 7   VLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKGEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNR++EVKVATPKEEMR P K+VTRIFVARI  SV+E+ FRSHFE+YGEITDLYMPKD 
Sbjct: 67  LGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDLYMPKDY 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDF----RPIGKMPQG- 241
            SK HRGIGFITF+S+DSVE+LM DTH+LGG+TV        +DD      P+ +M +  
Sbjct: 127 NSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVARMSRPP 186

Query: 242 ---QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKIFVGR 301
               GG G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G KIFVGR
Sbjct: 187 VAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGR 246

Query: 302 LPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICG 361
           LPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RRSHEICG
Sbjct: 247 LPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEICG 306

Query: 362 QQVAIDSATPLDDAGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGI 419
           Q+VAIDSATPLD+AG  +AGAS S + +S  E FGGY GPMR +GRMYG +  DDWGYG+
Sbjct: 307 QEVAIDSATPLDEAGP-SAGAS-SMLSSSRPEYFGGYGGPMRAFGRMYGGMSLDDWGYGM 366

[Close]

BLAST of HG10000664 vs. TAIR 10
Match: AT4G36960.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 531.6 bits (1368), Expect = 5.8e-151
Identity = 270/375 (72.00%), Postives = 308/375 (82.13%), Query Frame = 0


Query: 62  VLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHF 121
           VLGIPWD+D++GL++YMSKFG+LEDCIVMK+RSTGRSRGFGYVTFA+ EDAKNAL  EHF
Sbjct: 7   VLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKGEHF 66

Query: 122 LGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQ 181
           LGNR++EVKVATPKEEMR P K+VTRIFVARI  SV+E+ FRSHFE+YGEITDLYMPKD 
Sbjct: 67  LGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDLYMPKDY 126

Query: 182 GSKTHRGIGFITFASSDSVENLMADTHELGGSTV--------DDDF----RPIGKMPQG- 241
            SK HRGIGFITF+S+DSVE+LM DTH+LGG+TV        +DD      P+ +M +  
Sbjct: 127 NSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVARMSRPP 186

Query: 242 ---QGGGGGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKIFVGR 301
               GG G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G KIFVGR
Sbjct: 187 VAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGNKIFVGR 246

Query: 302 LPQEASADDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICG 361
           LPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RRSHEICG
Sbjct: 247 LPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEICG 306

Query: 362 QQVAIDSATPLDDAGAGAAGASGSFMMNSAAESFGGYVGPMRTYGRMYGSLDFDDWGYGI 419
           Q+VAIDSATPLD+AG  +AGAS S + +S  E FGGY GPMR +GRMYG +  DDWGYG+
Sbjct: 307 QEVAIDSATPLDEAGP-SAGAS-SMLSSSRPEYFGGYGGPMRAFGRMYGGMSLDDWGYGM 366

[Close]

BLAST of HG10000664 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 124.4 bits (311), Expect = 2.1e-28
Identity = 62/173 (35.84%), Postives = 101/173 (58.38%), Query Frame = 0


Query: 64  GIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLG 123
           GI WD D E L+EY  K+G+L + ++M++R+TGR+RGFG++ FA    A+  +  +H + 
Sbjct: 18  GISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDKHIID 77

Query: 124 NRMMEVKVATPKEEMR-----APP--------------KRVTRIFVARISQSVTEAAFRS 183
            R +E K A P+++ +     A P               R  +IFV  +  S+TEA F++
Sbjct: 78  GRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITEAEFKN 137

Query: 184 HFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT-HELGGSTVD 217
           +F+++G I D+ +  D  ++  RG GFITF S +SV+ ++  T HEL G  V+
Sbjct: 138 YFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVE 190

[Close]

BLAST of HG10000664 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.2 bits (308), Expect = 4.8e-28
Identity = 65/190 (34.21%), Postives = 107/190 (56.32%), Query Frame = 0


Query: 47  EEEEEEREIYFFTFRVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTF 106
           EE++ E         + GI WD D E L+EY  K+G+L + ++M++R+TGR+RGFG++ F
Sbjct: 4   EEQKMESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVF 63

Query: 107 ATDEDAKNALSSEHFLGNRMMEVKVATPKEEMR-----APP--------------KRVTR 166
           A    A+  +  +H +  R +E K A P+++ +     A P               R  +
Sbjct: 64  ADPSVAERVIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKK 123

Query: 167 IFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT 217
           IFV  +  S+TEA F+++F+++G I D+ +  D  ++  RG GFITF S +SV+ ++  T
Sbjct: 124 IFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKT 183

[Close]

BLAST of HG10000664 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-27
Identity = 66/190 (34.74%), Postives = 107/190 (56.32%), Query Frame = 0


Query: 64  GIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLG 123
           GI WD + E L+EY S FGE+ + +++K+R+TGR+RGFG+V FA    A+  ++ +H + 
Sbjct: 12  GISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEKHNID 71

Query: 124 NRMMEVKVATPKEEMR--------------APPKRVTRIFVARISQSVTEAAFRSHFEKY 183
            R++E K A P+++                  P R  +IFV  +  SVTE+ F+++FE++
Sbjct: 72  GRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKTYFEQF 131

Query: 184 GEITDLYMPKDQGSKTHRGIGFITFASSDSVENLMADT-HELGGSTVDDDFRPIGKMPQG 239
           G  TD+ +  D  ++  RG GFIT+ S ++VE ++  T HEL G  V+       ++  G
Sbjct: 132 GTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEVKRAVPKELSPG 191

The following BLAST results are available for this feature:

BLAST of HG10000664 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932294.1	7.8e-198	89.14	heterogeneous nuclear ribonucleoprotein D0-like [Cucurbita moschata]	[more]
XP_038877270.1	1.7e-197	95.37	RNA-binding protein Musashi homolog 1 [Benincasa hispida] >XP_038877271.1 RNA-bi...	[more]
XP_011649346.1	3.9e-197	95.10	RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >XP_031737421...	[more]
XP_008457826.1	1.5e-196	94.82	PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo] >XP_008457827.1 ...	[more]
KAG6571306.1	1.2e-195	94.55	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of HG10000664 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	4.8e-25	33.67	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
O43347	1.1e-24	39.87	RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1	[more]
Q61474	1.4e-24	39.87	RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1	[more]
Q8K3P4	1.4e-24	39.87	RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus OX=10116 GN=Msi1 PE=1...	[more]
O94432	5.9e-23	33.79	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of HG10000664 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWL0	3.8e-198	89.14	heterogeneous nuclear ribonucleoprotein D0-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LMN9	1.9e-197	95.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285910 PE=4 SV=1	[more]
A0A1S3C728	7.1e-197	94.82	RNA-binding protein Musashi homolog 1 OS=Cucumis melo OX=3656 GN=LOC103497417 PE...	[more]
A0A6J1I7Z8	8.7e-195	93.99	heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 OS=Cucurbita maxima ...	[more]
A0A6J1D811	1.3e-190	92.92	RNA-binding protein Musashi homolog 1 isoform X2 OS=Momordica charantia OX=3673 ...	[more]

BLAST of HG10000664 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36960.1	5.8e-151	72.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36960.2	5.8e-151	72.00	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	2.1e-28	35.84	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	4.8e-28	34.21	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	1.4e-27	34.74	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 278..349 e-value: 4.8E-16 score: 69.3 coord: 147..225 e-value: 2.5E-14 score: 63.6 coord: 59..130 e-value: 5.7E-20 score: 82.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 148..214 e-value: 2.6E-11 score: 43.2 coord: 64..118 e-value: 1.5E-13 score: 50.4 coord: 279..333 e-value: 1.0E-12 score: 47.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 146..222 score: 13.924767
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 58..134 score: 15.527974
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 277..353 score: 16.090803
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 139..248 e-value: 8.7E-20 score: 73.2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 33..138 e-value: 7.6E-24 score: 85.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 275..357 e-value: 1.8E-20 score: 74.8
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 62..418
None	No IPR available	PANTHER	PTHR48027:SF15	OS01G0945800 PROTEIN	coord: 62..418
None	No IPR available	CDD	cd12322	RRM2_TDP43	coord: 277..352 e-value: 2.45468E-29 score: 106.968
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 277..379
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 142..238
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 58..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10000664.1	HG10000664.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding